Guide to the Human Genome
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Name: MFSD10 Sequence: fasta or formatted (455aa) NCBI GI: 225703102
Description:

major facilitator superfamily domain containing 10

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [455aa] major facilitator superfamily domain containing 10
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         52           3
 C cysteine            1.5          7           1
 D aspartate           2.2         10           1
 E glutamate           2.0          9           1
 F phenylalanine       6.8         31           2
 G glycine            11.2         51           5
 H histidine           1.1          5           1
 I isoleucine          2.9         13           1
 K lysine              1.8          8           1
 L leucine            18.5         84           4
 M methionine          2.2         10           1
 N asparagine          0.4          2           1
 P proline             6.4         29           2
 Q glutamine           3.3         15           2
 R arginine            5.3         24           2
 S serine              8.1         37           2
 T threonine           4.4         20           2
 V valine              6.4         29           3
 W tryptophan          1.8          8           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   major facilitator superfamily domain containing 10 ... 
MFSD10                1.000   major facilitator superfamily domain containing 10 ...
MFSD9                 0.063   major facilitator superfamily domain containing 9 [...
SLC22A18              0.047   tumor suppressing subtransferable candidate 5 [Homo...
SLC22A18              0.047   tumor suppressing subtransferable candidate 5 [Homo...
HIATL1                0.047   hippocampus abundant transcript-like 1 
HIAT1                 0.046   hippocampus abundant transcript 1 
MFSD8                 0.030   major facilitator superfamily domain containing 8 [H...
SLC22A20              0.026   solute carrier family 22, member 20 
SLC2A8                0.025   solute carrier family 2 (facilitated glucose transpo...
SLC22A11              0.024   solute carrier family 22 member 11 
SLC22A6               0.021   solute carrier family 22 member 6 isoform d 
SLC22A6               0.021   solute carrier family 22 member 6 isoform c 
SLC22A6               0.021   solute carrier family 22 member 6 isoform b 
SLC22A6               0.021   solute carrier family 22 member 6 isoform a 
SLC22A24              0.018   solute carrier family 22, member 24 
SLC22A8               0.018   solute carrier family 22 member 8 
SLC46A1               0.017   proton-coupled folate transporter 
SLC22A3               0.016   solute carrier family 22 member 3 
SLC18A3               0.016   vesicular acetylcholine transporter 
SLC22A10              0.015   solute carrier family 22, member 10 
SPNS3                 0.015   spinster homolog 3 
SLC18A1               0.014   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.014   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.014   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.014   solute carrier family 18 (vesicular monoamine), membe...
SLC18A2               0.014   solute carrier family 18 (vesicular monoamine), memb...
SLC2A13               0.014   solute carrier family 2 (facilitated glucose transp...
SPNS2                 0.014   spinster homolog 2 
SLC22A1               0.014   solute carrier family 22 member 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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