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Search of human proteins with 41393579
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41393579 PDZ domain protein GIPC2 [Homo sapiens]
(315 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41393579 PDZ domain protein GIPC2 [Homo sapiens] 622 e-178
gi|42544140 regulator of G-protein signalling 19 interacting pro... 385 e-107
gi|42544144 regulator of G-protein signalling 19 interacting pro... 385 e-107
gi|5031715 regulator of G-protein signalling 19 interacting prot... 385 e-107
gi|18959204 GIPC PDZ domain containing family, member 3 [Homo sa... 337 1e-92
gi|42544142 regulator of G-protein signalling 19 interacting pro... 322 2e-88
gi|42544146 regulator of G-protein signalling 19 interacting pro... 322 2e-88
gi|42544149 regulator of G-protein signalling 19 interacting pro... 322 2e-88
gi|186972120 calcium/calmodulin-dependent serine protein kinase ... 44 2e-04
gi|186700629 calcium/calmodulin-dependent serine protein kinase ... 42 0.001
gi|186700627 calcium/calmodulin-dependent serine protein kinase ... 42 0.001
gi|148746189 multiple PDZ domain protein [Homo sapiens] 42 0.001
gi|87196343 PDZ domain containing 2 [Homo sapiens] 41 0.001
gi|4507137 acidic alpha 1 syntrophin [Homo sapiens] 39 0.005
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 39 0.006
gi|4505237 palmitoylated membrane protein 1 [Homo sapiens] 39 0.008
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 39 0.008
gi|223890252 glutamate receptor interacting protein 1 [Homo sapi... 38 0.010
gi|111154074 palmitoylated membrane protein 7 [Homo sapiens] 38 0.010
gi|88758603 protein interacting with C kinase 1 [Homo sapiens] 38 0.013
gi|88758600 protein interacting with C kinase 1 [Homo sapiens] 38 0.013
gi|7110697 protein interacting with C kinase 1 [Homo sapiens] 38 0.013
gi|218156340 chapsyn-110 isoform 3 [Homo sapiens] 37 0.030
gi|218156338 chapsyn-110 isoform 1 [Homo sapiens] 37 0.030
gi|91199538 chapsyn-110 isoform 2 [Homo sapiens] 37 0.030
gi|122937249 glutamate receptor interacting protein 2 [Homo sapi... 37 0.030
gi|112382257 InaD-like [Homo sapiens] 36 0.039
gi|21536464 palmitoylated membrane protein 3 [Homo sapiens] 36 0.039
gi|148833504 interleukin 16 isoform 2 [Homo sapiens] 36 0.051
gi|218505835 membrane-associated guanylate kinase-related 3 iso... 36 0.051
>gi|41393579 PDZ domain protein GIPC2 [Homo sapiens]
Length = 315
Score = 622 bits (1604), Expect = e-178
Identities = 315/315 (100%), Positives = 315/315 (100%)
Query: 1 MPLKLRGKKKAKSKETAGLVEGEPTGAGGGSLSASRAPARRLVFHAQLAHGSATGRVEGF 60
MPLKLRGKKKAKSKETAGLVEGEPTGAGGGSLSASRAPARRLVFHAQLAHGSATGRVEGF
Sbjct: 1 MPLKLRGKKKAKSKETAGLVEGEPTGAGGGSLSASRAPARRLVFHAQLAHGSATGRVEGF 60
Query: 61 SSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLGLEDFIFAHVKGIEKEVNV 120
SSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLGLEDFIFAHVKGIEKEVNV
Sbjct: 61 SSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLGLEDFIFAHVKGIEKEVNV 120
Query: 121 YKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAK 180
YKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAK
Sbjct: 121 YKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAK 180
Query: 181 KLKELKKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRLRSKGPATVEEMPS 240
KLKELKKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRLRSKGPATVEEMPS
Sbjct: 181 KLKELKKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRLRSKGPATVEEMPS 240
Query: 241 ETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVNPDEFAVALDETLGDFAFPDEFV 300
ETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVNPDEFAVALDETLGDFAFPDEFV
Sbjct: 241 ETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVNPDEFAVALDETLGDFAFPDEFV 300
Query: 301 FDVWGVIGDAKRRGL 315
FDVWGVIGDAKRRGL
Sbjct: 301 FDVWGVIGDAKRRGL 315
>gi|42544140 regulator of G-protein signalling 19 interacting
protein 1 isoform 1 [Homo sapiens]
Length = 333
Score = 385 bits (988), Expect = e-107
Identities = 202/329 (61%), Positives = 247/329 (75%), Gaps = 18/329 (5%)
Query: 1 MPLKLRGKKKA----KSKET----AGLVEGEPTGAGGGSLSASR--------APARRLVF 44
MPL L +KKA +++E GL GEP GGG + A RLVF
Sbjct: 1 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF 60
Query: 45 HAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLGLE 104
H QLAHGS TGR+EGF++++ELY +IA AF + +E+++CTLNT K+DM++LLGGQ+GLE
Sbjct: 61 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE 120
Query: 105 DFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIES 164
DFIFAHVKG KEV V+KSED+LGLTITDNG GYAFIKRIK+G VID + I VGD IE+
Sbjct: 121 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA 180
Query: 165 INGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFE-IELRSKAGK-SSGEKIGCGR 222
ING++++G RHY+VA+ LKEL + FT+KL EP+KAF+ I RS G+ SG ++G GR
Sbjct: 181 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR 240
Query: 223 ATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVNPDEF 282
TLRLRS+GPATVE++PS + KAIEK+DD+LE YMGIRD +LA TM E GKDK NPDE
Sbjct: 241 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL 300
Query: 283 AVALDETLGDFAFPDEFVFDVWGVIGDAK 311
A ALDE LGDFAFPDEFVFDVWG IGDAK
Sbjct: 301 AEALDERLGDFAFPDEFVFDVWGAIGDAK 329
>gi|42544144 regulator of G-protein signalling 19 interacting
protein 1 isoform 1 [Homo sapiens]
Length = 333
Score = 385 bits (988), Expect = e-107
Identities = 202/329 (61%), Positives = 247/329 (75%), Gaps = 18/329 (5%)
Query: 1 MPLKLRGKKKA----KSKET----AGLVEGEPTGAGGGSLSASR--------APARRLVF 44
MPL L +KKA +++E GL GEP GGG + A RLVF
Sbjct: 1 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF 60
Query: 45 HAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLGLE 104
H QLAHGS TGR+EGF++++ELY +IA AF + +E+++CTLNT K+DM++LLGGQ+GLE
Sbjct: 61 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE 120
Query: 105 DFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIES 164
DFIFAHVKG KEV V+KSED+LGLTITDNG GYAFIKRIK+G VID + I VGD IE+
Sbjct: 121 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA 180
Query: 165 INGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFE-IELRSKAGK-SSGEKIGCGR 222
ING++++G RHY+VA+ LKEL + FT+KL EP+KAF+ I RS G+ SG ++G GR
Sbjct: 181 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR 240
Query: 223 ATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVNPDEF 282
TLRLRS+GPATVE++PS + KAIEK+DD+LE YMGIRD +LA TM E GKDK NPDE
Sbjct: 241 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL 300
Query: 283 AVALDETLGDFAFPDEFVFDVWGVIGDAK 311
A ALDE LGDFAFPDEFVFDVWG IGDAK
Sbjct: 301 AEALDERLGDFAFPDEFVFDVWGAIGDAK 329
>gi|5031715 regulator of G-protein signalling 19 interacting protein
1 isoform 1 [Homo sapiens]
Length = 333
Score = 385 bits (988), Expect = e-107
Identities = 202/329 (61%), Positives = 247/329 (75%), Gaps = 18/329 (5%)
Query: 1 MPLKLRGKKKA----KSKET----AGLVEGEPTGAGGGSLSASR--------APARRLVF 44
MPL L +KKA +++E GL GEP GGG + A RLVF
Sbjct: 1 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF 60
Query: 45 HAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLGLE 104
H QLAHGS TGR+EGF++++ELY +IA AF + +E+++CTLNT K+DM++LLGGQ+GLE
Sbjct: 61 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE 120
Query: 105 DFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIES 164
DFIFAHVKG KEV V+KSED+LGLTITDNG GYAFIKRIK+G VID + I VGD IE+
Sbjct: 121 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA 180
Query: 165 INGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFE-IELRSKAGK-SSGEKIGCGR 222
ING++++G RHY+VA+ LKEL + FT+KL EP+KAF+ I RS G+ SG ++G GR
Sbjct: 181 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR 240
Query: 223 ATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVNPDEF 282
TLRLRS+GPATVE++PS + KAIEK+DD+LE YMGIRD +LA TM E GKDK NPDE
Sbjct: 241 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL 300
Query: 283 AVALDETLGDFAFPDEFVFDVWGVIGDAK 311
A ALDE LGDFAFPDEFVFDVWG IGDAK
Sbjct: 301 AEALDERLGDFAFPDEFVFDVWGAIGDAK 329
>gi|18959204 GIPC PDZ domain containing family, member 3 [Homo
sapiens]
Length = 312
Score = 337 bits (863), Expect = 1e-92
Identities = 167/273 (61%), Positives = 216/273 (79%), Gaps = 2/273 (0%)
Query: 41 RLVFHAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQ 100
RLVF QLAHGS TG++EGF++++ELYA+IA AF I+P+EIL+CTLN+ K+DM++LLGGQ
Sbjct: 36 RLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQ 95
Query: 101 LGLEDFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGD 160
+GLEDFIFAHV+G KEV V K+ED+LGLTITDNG GYAFIKRIK+G +I+ ++ +CVGD
Sbjct: 96 IGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGD 155
Query: 161 HIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFE-IELRSKAGKSSGE-KI 218
IE+IN +IVG RHY+VAK L+EL K + FT++L++PK+AF+ I RS++ K E K+
Sbjct: 156 SIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKV 215
Query: 219 GCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVN 278
GR TLRLRS G ATVEE PSE + +A K+DD+LE YMGIRD +LA+TM E K +
Sbjct: 216 TSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPELASTMVETSKKTAS 275
Query: 279 PDEFAVALDETLGDFAFPDEFVFDVWGVIGDAK 311
EFA LD LG+FAFPDEFV +VW IG+A+
Sbjct: 276 AQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
>gi|42544142 regulator of G-protein signalling 19 interacting
protein 1 isoform 2 [Homo sapiens]
Length = 236
Score = 322 bits (826), Expect = 2e-88
Identities = 160/232 (68%), Positives = 191/232 (82%), Gaps = 2/232 (0%)
Query: 82 LYCTLNTPKIDMERLLGGQLGLEDFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFI 141
++CTLNT K+DM++LLGGQ+GLEDFIFAHVKG KEV V+KSED+LGLTITDNG GYAFI
Sbjct: 1 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFI 60
Query: 142 KRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKA 201
KRIK+G VID + I VGD IE+ING++++G RHY+VA+ LKEL + FT+KL EP+KA
Sbjct: 61 KRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKA 120
Query: 202 FE-IELRSKAGK-SSGEKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMG 259
F+ I RS G+ SG ++G GR TLRLRS+GPATVE++PS + KAIEK+DD+LE YMG
Sbjct: 121 FDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMG 180
Query: 260 IRDIDLATTMFEAGKDKVNPDEFAVALDETLGDFAFPDEFVFDVWGVIGDAK 311
IRD +LA TM E GKDK NPDE A ALDE LGDFAFPDEFVFDVWG IGDAK
Sbjct: 181 IRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 232
>gi|42544146 regulator of G-protein signalling 19 interacting
protein 1 isoform 2 [Homo sapiens]
Length = 236
Score = 322 bits (826), Expect = 2e-88
Identities = 160/232 (68%), Positives = 191/232 (82%), Gaps = 2/232 (0%)
Query: 82 LYCTLNTPKIDMERLLGGQLGLEDFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFI 141
++CTLNT K+DM++LLGGQ+GLEDFIFAHVKG KEV V+KSED+LGLTITDNG GYAFI
Sbjct: 1 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFI 60
Query: 142 KRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKA 201
KRIK+G VID + I VGD IE+ING++++G RHY+VA+ LKEL + FT+KL EP+KA
Sbjct: 61 KRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKA 120
Query: 202 FE-IELRSKAGK-SSGEKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMG 259
F+ I RS G+ SG ++G GR TLRLRS+GPATVE++PS + KAIEK+DD+LE YMG
Sbjct: 121 FDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMG 180
Query: 260 IRDIDLATTMFEAGKDKVNPDEFAVALDETLGDFAFPDEFVFDVWGVIGDAK 311
IRD +LA TM E GKDK NPDE A ALDE LGDFAFPDEFVFDVWG IGDAK
Sbjct: 181 IRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 232
>gi|42544149 regulator of G-protein signalling 19 interacting
protein 1 isoform 2 [Homo sapiens]
Length = 236
Score = 322 bits (826), Expect = 2e-88
Identities = 160/232 (68%), Positives = 191/232 (82%), Gaps = 2/232 (0%)
Query: 82 LYCTLNTPKIDMERLLGGQLGLEDFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFI 141
++CTLNT K+DM++LLGGQ+GLEDFIFAHVKG KEV V+KSED+LGLTITDNG GYAFI
Sbjct: 1 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFI 60
Query: 142 KRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKA 201
KRIK+G VID + I VGD IE+ING++++G RHY+VA+ LKEL + FT+KL EP+KA
Sbjct: 61 KRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKA 120
Query: 202 FE-IELRSKAGK-SSGEKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMG 259
F+ I RS G+ SG ++G GR TLRLRS+GPATVE++PS + KAIEK+DD+LE YMG
Sbjct: 121 FDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMG 180
Query: 260 IRDIDLATTMFEAGKDKVNPDEFAVALDETLGDFAFPDEFVFDVWGVIGDAK 311
IRD +LA TM E GKDK NPDE A ALDE LGDFAFPDEFVFDVWG IGDAK
Sbjct: 181 IRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 232
>gi|186972120 calcium/calmodulin-dependent serine protein kinase
isoform 1 [Homo sapiens]
Length = 921
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 123 SEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKL 182
+++ +G+T+ N + + + RI GG+I T+ VGD I ING ++ + K L
Sbjct: 497 TDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 556
Query: 183 KELKKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRLRSKGPATVEEMPSET 242
+E++ T K++ + + +S + G ++ +V ++PS T
Sbjct: 557 REMRGS--ITFKIVPSYRTQSSSCERDSPSTSRQSPANGHSSTN------NSVSDLPSTT 608
Query: 243 KAK 245
+ K
Sbjct: 609 QPK 611
>gi|186700629 calcium/calmodulin-dependent serine protein kinase
isoform 3 [Homo sapiens]
Length = 897
Score = 41.6 bits (96), Expect = 0.001
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 123 SEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKL 182
+++ +G+T+ N + + + RI GG+I T+ VGD I ING ++ + K L
Sbjct: 491 TDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 550
Query: 183 KELK 186
+E++
Sbjct: 551 REMR 554
>gi|186700627 calcium/calmodulin-dependent serine protein kinase
isoform 2 [Homo sapiens]
Length = 898
Score = 41.6 bits (96), Expect = 0.001
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 123 SEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKL 182
+++ +G+T+ N + + + RI GG+I T+ VGD I ING ++ + K L
Sbjct: 497 TDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 556
Query: 183 KELK 186
+E++
Sbjct: 557 REMR 560
>gi|148746189 multiple PDZ domain protein [Homo sapiens]
Length = 2041
Score = 41.6 bits (96), Expect = 0.001
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 111 VKGIEKEV---NVYKSEDSLGLTIT-DNGVGYAFIKRIKDGGVIDSVKTICVGDHIESIN 166
+ GI E+ +V K ++ GL I+ + VG+ FI+ + G + + GD + +N
Sbjct: 544 IMGINYEIVVAHVSKFSENSGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELLEVN 603
Query: 167 GENIVGWRHYDVAKKLKELKKEELF----------TMKLIEPKKAFEIELRSKAGKSSGE 216
G ++G H DV LKEL E T ++ +IEL K GE
Sbjct: 604 GITLLGENHQDVVNILKELPIEVTMVCCRRTVPPTTQSELDSLDLCDIELTEKPHVDLGE 663
Query: 217 KIGCGRA---TLRLRSKGPATVE 236
IG L + G +T E
Sbjct: 664 FIGSSETEDPVLAMTDAGQSTEE 686
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 112 KGIEKEVNVYKSEDSLGLTITDNGVGYAFIKR-IKDGGVIDSVKTICVGDHIESINGENI 170
+ E+ +N+ K SLG+T++ N G I R I GG I I +GD I SIN E+
Sbjct: 1003 ESFERTINIAKGNSSLGMTVSANKDGLGMIVRSIIHGGAISRDGRIAIGDCILSINEEST 1062
Query: 171 VGWRHYDVAKKLKE---LKKEELFTMKLIEPKKAFEIELRSKAGK 212
+ + L+ + + T E + F+I L ++G+
Sbjct: 1063 ISVTNAQARAMLRRHSLIGPDIKITYVPAEHLEEFKISLGQQSGR 1107
Score = 37.7 bits (86), Expect = 0.013
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 122 KSEDSLGLTITDNG-VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAK 180
K + LG+ I++ + IK + + GV + + VGD I +++ E +VG Y + K
Sbjct: 1488 KDQGGLGIAISEEDTLSGVIIKSLTEHGVAATDGRLKVGDQILAVDDEIVVG---YPIEK 1544
Query: 181 KLKELKKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRLRSKGP 232
+ LK ++ I + + S AG +SGEK ++ + +S P
Sbjct: 1545 FISLLKTAKMTVKLTIHAENPDSQAVPSAAGAASGEKKNSSQSLMVPQSGSP 1596
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 118 VNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD 177
+ + LG I +K I GGV D +C GDHI I ++ G
Sbjct: 258 IELVNDGSGLGFGIIGGKATGVIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQ 317
Query: 178 VAKKLKE 184
VA+ L++
Sbjct: 318 VAQVLRQ 324
Score = 33.5 bits (75), Expect = 0.25
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 17/116 (14%)
Query: 112 KGIEKE---VNVYKSEDSLGLTITDNGVGYA----------FIKRIKDGGVIDSVKTICV 158
KG E E V + K+ LG+TI GY F+K I ++ I +
Sbjct: 369 KGEESETFDVELTKNVQGLGITIA----GYIGDKKLEPSGIFVKSITKSSAVEHDGRIQI 424
Query: 159 GDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFEIELRSKAGKSS 214
GD I +++G N+ G+ + + L+ + L T+ K+ E+ R K +
Sbjct: 425 GDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGMKQEAELMSREDVTKDA 480
Score = 32.7 bits (73), Expect = 0.43
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 122 KSEDSLGLTIT----DNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD 177
K LGL+I D GV F+ I GG+ D+ + GD I +NGE++
Sbjct: 1731 KPGKGLGLSIVGKRNDTGV---FVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEA 1787
Query: 178 VAKKLKELKKE-ELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRLRSKGP 232
VA LK + FT L + +E SK + E G ++ KGP
Sbjct: 1788 VAALLKVSEGSLSSFTFPLSGSSTSESLESSSKKNALASEIQGLRTVEMK---KGP 1840
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 118 VNVYKSEDSLGLTITDN-----GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVG 172
V V K+ LGL++ G G IKR+ GG + I GD I +ING+ +VG
Sbjct: 2751 VEVLKTSAGLGLSLDGGKSSVTGDGPLVIKRVYKGGAAEQAGIIEAGDEILAINGKPLVG 2810
Query: 173 WRHYDVAKKLKEL 185
H+D +K +
Sbjct: 2811 LMHFDAWNIMKSV 2823
Score = 28.9 bits (63), Expect = 6.2
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 117 EVNVYKSEDSLGLTITDNGVGYA------FIKRIKDGGVIDSVKTICVGDHIESINGENI 170
++ + K D LG+ ++ G G + ++K+GG + +GD + ING +
Sbjct: 334 KMELLKESDGLGIQVS-GGRGSKRSPHAIVVTQVKEGGAAHRDGRLSLGDELLVINGHLL 392
Query: 171 VGWRHYDVAKKLK 183
VG H + L+
Sbjct: 393 VGLSHEEAVAILR 405
Score = 28.9 bits (63), Expect = 6.2
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 141 IKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKL--KELKKEELFTMK--LI 196
+ R+ G T+ GD + S+NG ++ G H +V K L +L K+ L +K +
Sbjct: 2650 VHRVFSQGAASQEGTMNRGDFLLSVNGASLAGLAHGNVLKVLHQAQLHKDALVVIKKGMD 2709
Query: 197 EPKKAFEIELRSKAGK 212
+P+ + E + GK
Sbjct: 2710 QPRPSARQEPPTANGK 2725
>gi|4507137 acidic alpha 1 syntrophin [Homo sapiens]
Length = 505
Score = 39.3 bits (90), Expect = 0.005
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 141 IKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKK 200
I +I G D + + VGD I S+NGE++ H + + LK+ KE + +K ++
Sbjct: 114 ISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQVLKKTGKEVVLEVKYMKDVS 173
Query: 201 AFEIELRSKAGKSSGEKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKI--------DD 252
+ ++ G +S + L+ + P SE K +++ +D
Sbjct: 174 PY---FKNSTGGTSVGWDSPPASPLQRQPSSPGPTPRNFSEAKHMSLKMAYVSKRCTPND 230
Query: 253 VLELYMGIRDIDLATTMFEAGKDKVNPDEFAVAL 286
Y+ I D T+F KD+ + +A A+
Sbjct: 231 PEPRYLEICSADGQDTLFLRAKDEASARSWATAI 264
>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit
9A [Homo sapiens]
Length = 1098
Score = 38.9 bits (89), Expect = 0.006
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 118 VNVYKSEDSLGLTITDNGVGY--------AFIKRIKDGGVIDSVKTICVGDHIESINGEN 169
V + K ED LG++I GVG F+K + +GG I V D I ++G +
Sbjct: 505 VELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGIS 564
Query: 170 IVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFEI 204
+VG A L+ K F + +P + E+
Sbjct: 565 LVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEV 599
>gi|4505237 palmitoylated membrane protein 1 [Homo sapiens]
Length = 466
Score = 38.5 bits (88), Expect = 0.008
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 109 AHVKGIE-KEVNVYK----SEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIE 163
A VKG E ++V + + +E+ +G+T+ N + RI GG+I ++ VGD I
Sbjct: 59 AQVKGQEVRKVRLIQFEKVTEEPMGITLKLNEKQSCTVARILHGGMIHRQGSLHVGDEIL 118
Query: 164 SINGENIVGWRHYDVAKKLKELK 186
ING N+ + K +KE K
Sbjct: 119 EINGTNVTNHSVDQLQKAMKETK 141
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 38.5 bits (88), Expect = 0.008
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 141 IKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKK 200
I RI DG D + VGD I ++NG++I+ H D+ K +K+ T+++I +
Sbjct: 954 IGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLS--VTLRIIPQE- 1010
Query: 201 AFEIELRSKAGKSSGEK 217
EL S S EK
Sbjct: 1011 ----ELNSPTSAPSSEK 1023
Score = 33.5 bits (75), Expect = 0.25
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 118 VNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD 177
+ + K G TI D+ G +K+I D I +C GD I IN +N+ H +
Sbjct: 606 LTIVKGAQGFGFTIADSPTGQR-VKQILD---IQGCPGLCEGDLIVEINQQNVQNLSHTE 661
Query: 178 VAKKLKE 184
V LK+
Sbjct: 662 VVDILKD 668
>gi|223890252 glutamate receptor interacting protein 1 [Homo
sapiens]
Length = 1076
Score = 38.1 bits (87), Expect = 0.010
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 122 KSEDSLGLTITDNGV---GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDV 178
K +LGLT++ G+ G + ++ GG+ + VGD+I+++NG N+ +RH ++
Sbjct: 59 KEGTTLGLTVS-GGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEI 117
Query: 179 AKKLKEL 185
LK +
Sbjct: 118 ISLLKNV 124
Score = 32.7 bits (73), Expect = 0.43
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
Query: 117 EVNVYKSEDSLGLTITD------NGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENI 170
EV ++K ++ G I N I ++ GG D TI GD + S++G +
Sbjct: 152 EVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRL 211
Query: 171 VGWRHYDVAKKLKELKKEEL----FTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLR 226
+G H + LK+ +E + + +++ L + K+ G +G T
Sbjct: 212 LGTTHAEAMSILKQCGQEAALLIEYDVSVMDSVATASGPLLVEVAKTPGASLGVALTTSM 271
Query: 227 LRSKGPATVEEMPSETKA 244
+K ++++ S + A
Sbjct: 272 CCNKQVIVIDKIKSASIA 289
>gi|111154074 palmitoylated membrane protein 7 [Homo sapiens]
Length = 576
Score = 38.1 bits (87), Expect = 0.010
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 116 KEVNVYKSEDSLGLTIT-DNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWR 174
K + + K+ + LG TI D G + RI GG D I VGD + +NG + R
Sbjct: 138 KIIRLVKNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKR 197
Query: 175 HYDVAKKLKELKKEELFTMKLIEPKKAFEIELRSKAGK 212
++ + L + + T K+I K E SK GK
Sbjct: 198 PEEIIQILAQ--SQGAITFKIIPGSKE---ETPSKEGK 230
>gi|88758603 protein interacting with C kinase 1 [Homo sapiens]
Length = 415
Score = 37.7 bits (86), Expect = 0.013
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 155 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEEL--FTMKLIEPKKAFEIELRSKAGK 212
T+ GD I +NG +I G +VAK ++E+K E + +PK+ +++ K K
Sbjct: 63 TVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVK 122
Query: 213 -------SSG--EKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRD 262
SSG + +G RA L ++ K +E+++ ELY G+ +
Sbjct: 123 HRLVENMSSGTADALGLSRAIL-------------CNDGLVKRLEELERTAELYKGMTE 168
>gi|88758600 protein interacting with C kinase 1 [Homo sapiens]
Length = 415
Score = 37.7 bits (86), Expect = 0.013
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 155 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEEL--FTMKLIEPKKAFEIELRSKAGK 212
T+ GD I +NG +I G +VAK ++E+K E + +PK+ +++ K K
Sbjct: 63 TVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVK 122
Query: 213 -------SSG--EKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRD 262
SSG + +G RA L ++ K +E+++ ELY G+ +
Sbjct: 123 HRLVENMSSGTADALGLSRAIL-------------CNDGLVKRLEELERTAELYKGMTE 168
>gi|7110697 protein interacting with C kinase 1 [Homo sapiens]
Length = 415
Score = 37.7 bits (86), Expect = 0.013
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 155 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEEL--FTMKLIEPKKAFEIELRSKAGK 212
T+ GD I +NG +I G +VAK ++E+K E + +PK+ +++ K K
Sbjct: 63 TVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVK 122
Query: 213 -------SSG--EKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRD 262
SSG + +G RA L ++ K +E+++ ELY G+ +
Sbjct: 123 HRLVENMSSGTADALGLSRAIL-------------CNDGLVKRLEELERTAELYKGMTE 168
>gi|218156340 chapsyn-110 isoform 3 [Homo sapiens]
Length = 749
Score = 36.6 bits (83), Expect = 0.030
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 111 VKGIEKEVNVYKSEDSLGLTIT--DNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGE 168
++G ++V ++K LG I ++G G F+ I GG D + GD I S+NG
Sbjct: 312 LEGEPRKVVLHKGSTGLGFNIVGGEDGEGI-FVSFILAGGPADLSGELQRGDQILSVNGI 370
Query: 169 NIVGWRHYDVAKKLKEL-KKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRL 227
++ G H A LK + + E FE ++ + + G +LR
Sbjct: 371 DLRGASHEQAAAALKGAGQTVTIIAQYQPEDYARFEAKIHDLREQMMNHSMSSGSGSLRT 430
Query: 228 RSKGPATVEEMPSETKAK 245
K V M K+K
Sbjct: 431 NQKRSLYVRAMFDYDKSK 448
>gi|218156338 chapsyn-110 isoform 1 [Homo sapiens]
Length = 975
Score = 36.6 bits (83), Expect = 0.030
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 111 VKGIEKEVNVYKSEDSLGLTIT--DNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGE 168
++G ++V ++K LG I ++G G F+ I GG D + GD I S+NG
Sbjct: 520 LEGEPRKVVLHKGSTGLGFNIVGGEDGEGI-FVSFILAGGPADLSGELQRGDQILSVNGI 578
Query: 169 NIVGWRHYDVAKKLKEL-KKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRL 227
++ G H A LK + + E FE ++ + + G +LR
Sbjct: 579 DLRGASHEQAAAALKGAGQTVTIIAQYQPEDYARFEAKIHDLREQMMNHSMSSGSGSLRT 638
Query: 228 RSKGPATVEEMPSETKAK 245
K V M K+K
Sbjct: 639 NQKRSLYVRAMFDYDKSK 656
>gi|91199538 chapsyn-110 isoform 2 [Homo sapiens]
Length = 870
Score = 36.6 bits (83), Expect = 0.030
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 111 VKGIEKEVNVYKSEDSLGLTIT--DNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGE 168
++G ++V ++K LG I ++G G F+ I GG D + GD I S+NG
Sbjct: 415 LEGEPRKVVLHKGSTGLGFNIVGGEDGEGI-FVSFILAGGPADLSGELQRGDQILSVNGI 473
Query: 169 NIVGWRHYDVAKKLKEL-KKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRL 227
++ G H A LK + + E FE ++ + + G +LR
Sbjct: 474 DLRGASHEQAAAALKGAGQTVTIIAQYQPEDYARFEAKIHDLREQMMNHSMSSGSGSLRT 533
Query: 228 RSKGPATVEEMPSETKAK 245
K V M K+K
Sbjct: 534 NQKRSLYVRAMFDYDKSK 551
>gi|122937249 glutamate receptor interacting protein 2 [Homo
sapiens]
Length = 1141
Score = 36.6 bits (83), Expect = 0.030
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 112 KGIEKEVNVYKSEDSLGLTI---TDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGE 168
+GI + K +LGLTI TD G + ++ GG+ + +GD+I S+NG
Sbjct: 141 RGITVVELIKKEGSTLGLTISGGTDKD-GKPRVSNLRPGGLAARSDLLNIGDYIRSVNGI 199
Query: 169 NIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFE 203
++ RH ++ LK + + + ++ P A E
Sbjct: 200 HLTRLRHDEIITLLKNVGERVVLEVEYELPPPAPE 234
Score = 35.8 bits (81), Expect = 0.051
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 117 EVNVYKSEDSLGLTITDNGVGYAFIKR------IKDGGVIDSVKTICVGDHIESINGENI 170
+V++YK +S G + R ++ GG D ++ VGD + S++G +
Sbjct: 245 DVSLYKEGNSFGFVLRGGAHEDGHKSRPLVLTYVRPGGPADREGSLKVGDRLLSVDGIPL 304
Query: 171 VGWRHYDVAKKLKELKKEELFTMK--LIEPKKAFEIE--LRSKAGKSSGEKIGCGRATLR 226
G H L++ E LF ++ + P L + K+ G +G T
Sbjct: 305 HGASHATALATLRQCSHEALFQVEYDVATPDTVANASGPLMVEIVKTPGSALGISLTTTS 364
Query: 227 LRSKGPATVEEM 238
LR+K T++ +
Sbjct: 365 LRNKSVITIDRI 376
Score = 28.9 bits (63), Expect = 6.2
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 118 VNVYKSEDS-LGLTITDNGV---GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGW 173
V + K+ S LG+++T + I RIK V+D + GDHI SI+G ++
Sbjct: 346 VEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHC 405
Query: 174 RHYDVAKKLKELKKE 188
+ K L + ++
Sbjct: 406 SLLEATKLLASISEK 420
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 36.2 bits (82), Expect = 0.039
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 125 DSLGLTITDN-----GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVA 179
D+LG++I G FI I+ GV + + VGD I SING+ + G H DV
Sbjct: 1685 DALGISIAGGRGSPLGDIPVFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVV 1744
Query: 180 KKLK 183
LK
Sbjct: 1745 NLLK 1748
Score = 35.4 bits (80), Expect = 0.066
Identities = 21/71 (29%), Positives = 30/71 (42%)
Query: 113 GIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVG 172
G +EV + LG I ++ I GG+ D + GDHI I G N+ G
Sbjct: 244 GHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQG 303
Query: 173 WRHYDVAKKLK 183
VA+ L+
Sbjct: 304 MTSEQVAQVLR 314
Score = 31.6 bits (70), Expect = 0.96
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 122 KSEDSLGLTITD--NGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVA 179
K+ LGL+I NG G FI I GG D + GD I S+NGE++ VA
Sbjct: 1539 KAGRGLGLSIVGKRNGSG-VFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETVA 1597
Query: 180 KKLK 183
LK
Sbjct: 1598 TILK 1601
Score = 28.5 bits (62), Expect = 8.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 127 LGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKEL 185
LG+ + D+ G+ +I I GG +D++ + D + +NG + G + LKE+
Sbjct: 570 LGVEV-DSFDGHHYISSIVSGGPVDTLGLLQPEDELLEVNGMQLYGKSRREAVSFLKEV 627
>gi|21536464 palmitoylated membrane protein 3 [Homo sapiens]
Length = 585
Score = 36.2 bits (82), Expect = 0.039
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 116 KEVNVYKSEDSLGLTIT-DNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWR 174
K V + K+++ LG TI D G + RI GG D + VGD + +NG ++ R
Sbjct: 136 KIVRLVKNKEPLGATIRRDEHSGAVVVARIMRGGAADRSGLVHVGDELREVNGIAVLHKR 195
Query: 175 HYDVAKKLKELKKEELFTMKLI 196
++++ L + + T+K+I
Sbjct: 196 PDEISQILAQ--SQGSITLKII 215
>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
Length = 1332
Score = 35.8 bits (81), Expect = 0.051
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 140 FIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 187
++K I GG + + GD I +NGE++ G H D +K K+ KK
Sbjct: 245 YVKTIFAGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQAKK 292
Score = 31.6 bits (70), Expect = 0.96
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 24/128 (18%)
Query: 92 DMERLLGGQLGLEDFIFAHVKGIEKEVNVY-----KSEDSLGLTIT--DNGVGYAF---- 140
D L GQ + +K + +EV V K D + +TI + G G F
Sbjct: 1071 DHSSLQSGQSVISLLSSEELKKLIEEVKVLDEATLKQLDGIHVTILHKEEGAGLGFSLAG 1130
Query: 141 ----------IKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD---VAKKLKELKK 187
+ R+ G+ TI G+ + SING+++ G H+D + ++ +E ++
Sbjct: 1131 GADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQ 1190
Query: 188 EELFTMKL 195
+ T KL
Sbjct: 1191 AVIVTRKL 1198
>gi|218505835 membrane-associated guanylate kinase-related 3
isoform 1 [Homo sapiens]
Length = 1481
Score = 35.8 bits (81), Expect = 0.051
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 141 IKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKK 200
I R+ +G D + VGDHI ++NG++IV H ++ + +K+ T+
Sbjct: 882 IGRVIEGSPADRCGKLKVGDHISAVNGQSIVELSHDNIVQLIKDAGVTVTLTV------- 934
Query: 201 AFEIELRSKAGKSSGEKIGCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELY 257
I G SG L+ R G + +P + A E DV Y
Sbjct: 935 ---IAEEEHHGPPSGTNSARQSPALQHRPMGQSQANHIPGDRSALEGEIGKDVSTSY 988
Score = 30.8 bits (68), Expect = 1.6
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 109 AHVKGIEKEVNVYKSEDSLGLTIT--DNGVGYAFIKRI-KDGGVIDSVKTICVGDHIESI 165
+ +KG+ ++ KS G TI D + +K + KDG K I GD I I
Sbjct: 402 SQLKGVLVRASLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGK-IAPGDVIVDI 460
Query: 166 NGENIVGWRHYDVAK 180
NG ++G H DV +
Sbjct: 461 NGNCVLGHTHADVVQ 475
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.137 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,362,505
Number of Sequences: 37866
Number of extensions: 494368
Number of successful extensions: 1826
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1679
Number of HSP's gapped (non-prelim): 191
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.