Guide to the Human Genome
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Name: PICK1 Sequence: fasta or formatted (415aa) NCBI GI: 88758600
Description:

protein interacting with C kinase 1

Referenced in:

Inositol Pathways

Other entries for this name:
alt mRNA [415aa] protein interacting with C kinase 1
alt mRNA [415aa] protein interacting with C kinase 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         32           2
 C cysteine            1.9          8           1
 D aspartate           7.5         31           2
 E glutamate           8.7         36           7
 F phenylalanine       3.1         13           1
 G glycine             7.0         29           3
 H histidine           1.7          7           1
 I isoleucine          5.3         22           1
 K lysine              7.5         31           2
 L leucine            10.4         43           2
 M methionine          2.4         10           1
 N asparagine          2.9         12           1
 P proline             3.1         13           1
 Q glutamine           3.9         16           1
 R arginine            5.3         22           1
 S serine              4.6         19           2
 T threonine           5.8         24           2
 V valine              6.7         28           1
 W tryptophan          0.2          1           1
 Y tyrosine            4.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein interacting with C kinase 1 
PICK1                 1.000   protein interacting with C kinase 1 
PICK1                 1.000   protein interacting with C kinase 1 
ARFIP2                0.047   ADP-ribosylation factor interacting protein 2 
ARFIP1                0.046   ADP-ribosylation factor interacting protein 1 isofor...
ARFIP1                0.046   ADP-ribosylation factor interacting protein 1 isofor...
ARFIP1                0.046   ADP-ribosylation factor interacting protein 1 isoform...
MPDZ                  0.027   multiple PDZ domain protein 
LNX1                  0.027   ligand of numb-protein X 1 isoform a 
LNX1                  0.027   ligand of numb-protein X 1 isoform b 
SNTG2                 0.027   syntrophin, gamma 2 
IL16                  0.027   interleukin 16 isoform 2 
IL16                  0.027   interleukin 16 isoform 1 precursor 
MAGI3                 0.024   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.024   membrane-associated guanylate kinase-related  3 iso...
MLLT4                 0.024   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.024   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.024   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MAGI2                 0.024   membrane associated guanylate kinase, WW and PDZ dom...
PARD3                 0.022   partitioning-defective protein 3 homolog 
PDZD2                 0.022   PDZ domain containing 2 
GOPC                  0.021   golgi associated PDZ and coiled-coil motif containing...
GOPC                  0.021   golgi associated PDZ and coiled-coil motif containin...
PTPN13                0.021   protein tyrosine phosphatase, non-receptor type 13 i...
SNTG1                 0.021   syntrophin, gamma 1 
INADL                 0.020   InaD-like 
PTPN13                0.019   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.019   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.019   protein tyrosine phosphatase, non-receptor type 13 is...
FRMPD2L1              0.019   FERM and PDZ domain containing 2 like 1 isoform 4 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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