Guide to the Human Genome
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Name: BTLA Sequence: fasta or formatted (289aa) NCBI GI: 145580621
Description:

B and T lymphocyte associated isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {241aa} B and T lymphocyte associated isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         13           1
 C cysteine            4.5         13           2
 D aspartate           4.2         12           1
 E glutamate           7.6         22           2
 F phenylalanine       3.8         11           2
 G glycine             4.8         14           2
 H histidine           2.8          8           1
 I isoleucine          4.8         14           1
 K lysine              5.2         15           1
 L leucine            11.4         33           2
 M methionine          1.4          4           1
 N asparagine          5.9         17           1
 P proline             5.5         16           1
 Q glutamine           3.5         10           1
 R arginine            4.8         14           2
 S serine              9.3         27           1
 T threonine           5.5         16           2
 V valine              5.2         15           1
 W tryptophan          1.7          5           1
 Y tyrosine            3.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B and T lymphocyte associated isoform 1 
BTLA                  0.785   B and T lymphocyte associated isoform 2 
MYLK                  0.019   myosin light chain kinase isoform 3A 
MYLK                  0.019   myosin light chain kinase isoform 1 
GPR183                0.017   EBV-induced G protein-coupled receptor 2 
TTN                   0.017   titin isoform N2-A 
MYLK                  0.016   myosin light chain kinase isoform 3B 
MYLK                  0.016   myosin light chain kinase isoform 2 
MXRA5                 0.016   adlican 
SEMA4G                0.016   semaphorin 4G 
TTN                   0.014   titin isoform novex-3 
CD8B                  0.014   CD8b antigen isoform 2 precursor 
ROR2                  0.014   receptor tyrosine kinase-like orphan receptor 2 prec...
KIT                   0.014   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge...
KIT                   0.014   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene...
PITRM1                0.014   metalloprotease 1 
SYT2                  0.012   synaptotagmin II 
SYT2                  0.012   synaptotagmin II 
HSPG2                 0.012   heparan sulfate proteoglycan 2 
LOC653882             0.012   PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline...
ABCA5                 0.012   ATP-binding cassette, sub-family A , member 5 
ABCA5                 0.012   ATP-binding cassette, sub-family A , member 5 
CD8B                  0.012   CD8b antigen isoform 1 precursor 
CD8B                  0.012   CD8b antigen isoform 5 precursor 
CD8B                  0.012   CD8b antigen isoform 3 precursor 
CADM1                 0.009   immunoglobulin superfamily, member 4D isoform 2 [Ho...
CHL1                  0.009   cell adhesion molecule with homology to L1CAM precur...
CD8B                  0.009   CD8b antigen isoform 4 precursor 
FCGR3B                0.007   low affinity immunoglobulin gamma Fc region recepto...
JAM2                  0.007   junctional adhesion molecule 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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