Guide to the Human Genome
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Name: ANKRD49 Sequence: fasta or formatted (239aa) NCBI GI: 41350198
Description:

fetal globin inducing factor

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         16           2
 C cysteine            0.8          2           1
 D aspartate           7.9         19           2
 E glutamate           9.6         23           2
 F phenylalanine       2.1          5           1
 G glycine             5.0         12           1
 H histidine           4.6         11           1
 I isoleucine          3.3          8           1
 K lysine              5.4         13           2
 L leucine            12.6         30           3
 M methionine          1.3          3           1
 N asparagine          6.3         15           2
 P proline             3.3          8           1
 Q glutamine           4.2         10           1
 R arginine            5.0         12           2
 S serine              5.9         14           2
 T threonine           7.1         17           2
 V valine              4.2         10           1
 W tryptophan          2.1          5           1
 Y tyrosine            2.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fetal globin inducing factor 
ANK3                  0.135   ankyrin 3 isoform 1 
ANKRD52               0.128   ankyrin repeat domain 52 
ANK1                  0.120   ankyrin 1 isoform 9 
ANK1                  0.120   ankyrin 1 isoform 1 
ANK1                  0.120   ankyrin 1 isoform 3 
ANK1                  0.120   ankyrin 1 isoform 2 
ANK1                  0.120   ankyrin 1 isoform 4 
ANKRD28               0.116   ankyrin repeat domain 28 
TNKS2                 0.113   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.113   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD44               0.111   ankyrin repeat domain 44 
ANK2                  0.109   ankyrin 2 isoform 3 
ANK2                  0.109   ankyrin 2 isoform 2 
ANK2                  0.109   ankyrin 2 isoform 1 
EHMT1                 0.105   euchromatic histone-lysine N-methyltransferase 1 is...
CTTNBP2               0.103   cortactin binding protein 2 
ANKRD12               0.101   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.101   ankyrin repeat domain 12 isoform 1 
ANKK1                 0.099   ankyrin repeat and kinase domain containing 1 
ANKRD11               0.099   ankyrin repeat domain 11 
EHMT2                 0.096   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.096   euchromatic histone-lysine N-methyltransferase 2 is...
RIPK4                 0.094   ankyrin repeat domain 3 
ZDHHC17               0.094   huntingtin interacting protein 14 
ILK                   0.092   integrin-linked kinase 
ILK                   0.092   integrin-linked kinase 
ILK                   0.092   integrin-linked kinase 
PSMD10                0.090   proteasome 26S non-ATPase subunit 10 isoform 1 
ANKRD6                0.090   ankyrin repeat domain 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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