Guide to the Human Genome
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Name: ZDHHC17 Sequence: fasta or formatted (632aa) NCBI GI: 103471993
Description:

huntingtin interacting protein 14

Referenced in:

Additional Brain Proteins
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         39           2
 C cysteine            3.2         20           2
 D aspartate           5.2         33           2
 E glutamate           4.0         25           2
 F phenylalanine       5.7         36           2
 G glycine             7.1         45           2
 H histidine           3.8         24           2
 I isoleucine          6.3         40           2
 K lysine              5.4         34           3
 L leucine             9.3         59           3
 M methionine          3.5         22           2
 N asparagine          4.6         29           2
 P proline             3.2         20           1
 Q glutamine           3.6         23           1
 R arginine            3.8         24           2
 S serine              5.2         33           1
 T threonine           5.9         37           3
 V valine              6.0         38           2
 W tryptophan          3.5         22           1
 Y tyrosine            4.6         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   huntingtin interacting protein 14 
ZDHHC13               0.449   zinc finger, DHHC domain containing 13 isoform 1 [Ho...
ZDHHC13               0.332   zinc finger, DHHC domain containing 13 isoform 2 [Ho...
EHMT1                 0.066   euchromatic histone-lysine N-methyltransferase 1 is...
EHMT2                 0.058   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.058   euchromatic histone-lysine N-methyltransferase 2 is...
CASKIN1               0.057   CASK interacting protein 1 
ZDHHC4                0.055   zinc finger, DHHC-type containing 4 
ZDHHC4                0.055   zinc finger, DHHC-type containing 4 
ZDHHC4                0.055   zinc finger, DHHC-type containing 4 
ZDHHC4                0.055   zinc finger, DHHC-type containing 4 
KIDINS220             0.055   kinase D-interacting substrate of 220 kDa 
ZDHHC16               0.053   Abl-philin 2 isoform 2 
ZDHHC16               0.053   Abl-philin 2 isoform 4 
ZDHHC5                0.052   zinc finger, DHHC domain containing 5 
MIB1                  0.052   mindbomb homolog 1 
ZDHHC12               0.052   zinc finger, DHHC domain containing 12 
ANKRD44               0.051   ankyrin repeat domain 44 
ANKK1                 0.050   ankyrin repeat and kinase domain containing 1 
ZDHHC16               0.050   Abl-philin 2 isoform 1 
ZDHHC16               0.050   Abl-philin 2 isoform 1 
ANKRD50               0.049   ankyrin repeat domain 50 
ANKRD18B              0.049   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.049   PREDICTED: ankyrin repeat domain 18B 
CASKIN2               0.048   cask-interacting protein 2 isoform a 
ANK3                  0.048   ankyrin 3 isoform 1 
ANKRD18B              0.047   PREDICTED: ankyrin repeat domain 18B 
FANK1                 0.047   fibronectin type III and ankyrin repeat domains 1 [...
ANK2                  0.047   ankyrin 2 isoform 3 
ANK2                  0.047   ankyrin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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