Guide to the Human Genome
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Name: LRRC8C Sequence: fasta or formatted (803aa) NCBI GI: 19923729
Description:

leucine rich repeat containing 8 family, member C

Referenced in:

Adipose Tissue
Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         29           2
 C cysteine            2.1         17           1
 D aspartate           4.7         38           2
 E glutamate           6.4         51           2
 F phenylalanine       5.1         41           1
 G glycine             3.0         24           1
 H histidine           2.7         22           1
 I isoleucine          6.1         49           3
 K lysine              8.0         64           2
 L leucine            14.1        113           2
 M methionine          2.6         21           1
 N asparagine          5.2         42           2
 P proline             4.5         36           3
 Q glutamine           4.1         33           2
 R arginine            3.4         27           1
 S serine              8.8         71           3
 T threonine           4.4         35           2
 V valine              6.7         54           2
 W tryptophan          1.1          9           2
 Y tyrosine            3.4         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 8 family, member C [H... 
LRRC8E                0.622   leucine rich repeat containing 8 family, member E [H...
LRRC8A                0.589   leucine rich repeat containing 8 family, member A [H...
LRRC8A                0.589   leucine rich repeat containing 8 family, member A [...
LRRC8A                0.589   leucine rich repeat containing 8 family, member A [...
LRRC8D                0.527   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.527   leucine rich repeat containing 8 family, member D [H...
LRRC8B                0.510   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.510   leucine rich repeat containing 8 family, member B [H...
SHOC2                 0.060   soc-2 suppressor of clear homolog 
LRRC7                 0.059   leucine rich repeat containing 7 
LOC401387             0.057   leucine-rich repeat and death domain-containing pro...
ERBB2IP               0.055   ERBB2 interacting protein isoform 7 
ERBB2IP               0.055   ERBB2 interacting protein isoform 2 
SCRIB                 0.054   scribble isoform b 
SCRIB                 0.054   scribble isoform a 
LRRC1                 0.049   leucine rich repeat containing 1 
FLII                  0.047   flightless I homolog 
LRRC28                0.046   leucine rich repeat containing 28 
LRDD                  0.046   leucine rich repeat and death domain containing prot...
LRDD                  0.046   leucine rich repeat and death domain containing prot...
RSU1                  0.044   ras suppressor protein 1 isoform 1 
MFHAS1                0.044   malignant fibrous histiocytoma amplified sequence 1...
LRRIQ4                0.042   leucine-rich repeats and IQ motif containing 4 [Hom...
LRRC40                0.040   leucine rich repeat containing 40 
LRDD                  0.039   leucine rich repeat and death domain containing prot...
LRRC69                0.037   leucine rich repeat containing 69 
LRRC39                0.036   leucine rich repeat containing 39 
LRCH2                 0.035   leucine-rich repeats and calponin homology (CH) dom...
RSU1                  0.035   ras suppressor protein 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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