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Search of human proteins with 40805868
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens] 427 e-120
gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens] 420 e-118
gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens] 391 e-109
gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens] 375 e-104
gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens] 367 e-102
gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens] 339 1e-93
gi|70608174 tumor protein D52 isoform 2 [Homo sapiens] 172 3e-43
gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens] 170 1e-42
gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens] 170 1e-42
gi|4827038 tumor protein D52 isoform 3 [Homo sapiens] 149 1e-36
gi|70608172 tumor protein D52 isoform 1 [Homo sapiens] 149 1e-36
gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens] 143 1e-34
gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens] 130 9e-31
gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens] 121 5e-28
gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens] 116 1e-26
gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens] 116 1e-26
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 36 0.023
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 36 0.023
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 36 0.023
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 36 0.023
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.050
gi|55770878 neuronal pentraxin I precursor [Homo sapiens] 33 0.19
gi|56550043 sarcolemma associated protein [Homo sapiens] 33 0.25
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 32 0.33
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 32 0.33
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 32 0.43
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 32 0.56
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 32 0.56
gi|215490011 small inducible cytokine subfamily E, member 1 isof... 32 0.56
gi|215490009 small inducible cytokine subfamily E, member 1 isof... 32 0.56
>gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens]
Length = 220
Score = 427 bits (1099), Expect = e-120
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 180
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 180
Query: 181 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
>gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens]
Length = 229
Score = 420 bits (1079), Expect = e-118
Identities = 220/229 (96%), Positives = 220/229 (96%), Gaps = 9/229 (3%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM---------SSYSIRHSISMPA 171
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM SSYSIRHSISMPA
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
Query: 172 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
>gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens]
Length = 206
Score = 391 bits (1005), Expect = e-109
Identities = 206/220 (93%), Positives = 206/220 (93%), Gaps = 14/220 (6%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 180
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD MRNSATFKS
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD--------------MRNSATFKS 166
Query: 181 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 167 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 206
>gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens]
Length = 200
Score = 375 bits (963), Expect = e-104
Identities = 200/220 (90%), Positives = 200/220 (90%), Gaps = 20/220 (9%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 180
YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 160
Query: 181 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 161 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 200
>gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens]
Length = 209
Score = 367 bits (943), Expect = e-102
Identities = 200/229 (87%), Positives = 200/229 (87%), Gaps = 29/229 (12%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM---------SSYSIRHSISMPA 171
YKKTQETLSQAGQKTSAALSTVGSAISRKLGDM SSYSIRHSISMPA
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 160
Query: 172 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 161 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 209
>gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens]
Length = 186
Score = 339 bits (869), Expect = 1e-93
Identities = 186/220 (84%), Positives = 186/220 (84%), Gaps = 34/220 (15%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 180
YKKTQETLSQAGQKTSAALSTVGSAISRKLGD MRNSATFKS
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGD--------------MRNSATFKS 146
Query: 181 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 147 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 186
>gi|70608174 tumor protein D52 isoform 2 [Homo sapiens]
Length = 207
Score = 172 bits (435), Expect = 3e-43
Identities = 102/200 (51%), Positives = 128/200 (64%), Gaps = 31/200 (15%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 81 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 120
Query: 151 ISRKLGDM---------SSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDRENGSD 201
I++KL D+ S SI+HSISMPAMRNS TFKSFE++V +KSKV G + G D
Sbjct: 121 ITKKLEDVKLQAFSHSFSIRSIQHSISMPAMRNSPTFKSFEEKVENLKSKVGGTKPAGGD 180
Query: 202 --NLPSSAGSGDKPLSDPAP 219
+ +SA + ++P P
Sbjct: 181 FGEVLNSAANASATTTEPLP 200
>gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens]
Length = 175
Score = 170 bits (430), Expect = 1e-42
Identities = 94/163 (57%), Positives = 117/163 (71%), Gaps = 25/163 (15%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 2 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 61
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSS 160
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM S
Sbjct: 62 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDM-S 100
Query: 161 YSIRHSISMPAMRNSATFKSFEDRVGT----IKSKVVGDRENG 199
YSIRHSISMPAMRNS TFKSFE+RV T +K+KV G NG
Sbjct: 101 YSIRHSISMPAMRNSPTFKSFEERVETTVTSLKTKVGGTNPNG 143
>gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens]
Length = 204
Score = 170 bits (430), Expect = 1e-42
Identities = 94/163 (57%), Positives = 117/163 (71%), Gaps = 25/163 (15%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSS 160
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM S
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDM-S 129
Query: 161 YSIRHSISMPAMRNSATFKSFEDRVGT----IKSKVVGDRENG 199
YSIRHSISMPAMRNS TFKSFE+RV T +K+KV G NG
Sbjct: 130 YSIRHSISMPAMRNSPTFKSFEERVETTVTSLKTKVGGTNPNG 172
>gi|4827038 tumor protein D52 isoform 3 [Homo sapiens]
Length = 184
Score = 149 bits (377), Expect = 1e-36
Identities = 90/191 (47%), Positives = 116/191 (60%), Gaps = 36/191 (18%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 81 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 120
Query: 151 ISRKLGDMSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAG 208
I++KL D ++NS TFKSFE++V +KSKV G + G D + +SA
Sbjct: 121 ITKKLED--------------VKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAA 166
Query: 209 SGDKPLSDPAP 219
+ ++P P
Sbjct: 167 NASATTTEPLP 177
>gi|70608172 tumor protein D52 isoform 1 [Homo sapiens]
Length = 224
Score = 149 bits (377), Expect = 1e-36
Identities = 90/191 (47%), Positives = 116/191 (60%), Gaps = 36/191 (18%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 61 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 120
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 121 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 160
Query: 151 ISRKLGDMSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAG 208
I++KL D ++NS TFKSFE++V +KSKV G + G D + +SA
Sbjct: 161 ITKKLED--------------VKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAA 206
Query: 209 SGDKPLSDPAP 219
+ ++P P
Sbjct: 207 NASATTTEPLP 217
>gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens]
Length = 144
Score = 143 bits (361), Expect = 1e-34
Identities = 77/133 (57%), Positives = 97/133 (72%), Gaps = 21/133 (15%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSS 160
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM S
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDM-S 129
Query: 161 YSIRHSISMPAMR 173
YSIRHSISMPAMR
Sbjct: 130 YSIRHSISMPAMR 142
>gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens]
Length = 140
Score = 130 bits (327), Expect = 9e-31
Identities = 82/174 (47%), Positives = 101/174 (58%), Gaps = 43/174 (24%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDR 196
ALST+G+ I RKLG ++ SAT +SFE +GTIKSKV G +
Sbjct: 97 ALSTMGTLICRKLG--------------GVKKSATLRSFEGLMGTIKSKVSGGK 136
>gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens]
Length = 131
Score = 121 bits (303), Expect = 5e-28
Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 20/118 (16%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM 158
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDM 128
>gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens]
Length = 132
Score = 116 bits (291), Expect = 1e-26
Identities = 74/160 (46%), Positives = 91/160 (56%), Gaps = 43/160 (26%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKSFE 182
ALST+G+ I RKLG ++ SAT +SFE
Sbjct: 97 ALSTMGTLICRKLG--------------GVKKSATLRSFE 122
>gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens]
Length = 136
Score = 116 bits (291), Expect = 1e-26
Identities = 74/160 (46%), Positives = 91/160 (56%), Gaps = 43/160 (26%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKSFE 182
ALST+G+ I RKLG ++ SAT +SFE
Sbjct: 97 ALSTMGTLICRKLG--------------GVKKSATLRSFE 122
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 36.2 bits (82), Expect = 0.023
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 98 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 131
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 132 QEQQADLQRRLKEARKEAKEALEA 155
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 36.2 bits (82), Expect = 0.023
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 152 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 211
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 212 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 245
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 246 QEQQADLQRRLKEARKEAKEALEA 269
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 36.2 bits (82), Expect = 0.023
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 98 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 131
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 132 QEQQADLQRRLKEARKEAKEALEA 155
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 36.2 bits (82), Expect = 0.023
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 172 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 231
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 232 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 265
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 266 QEQQADLQRRLKEARKEAKEALEA 289
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 35.0 bits (79), Expect = 0.050
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 29 TGVAARTPAVEGLTEAEE---EELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLST 85
T +AA T ++ L + + +E + K + I + + + KE +C LK +L +
Sbjct: 2185 TQLAAFTKSMSSLQDDRDRVIDEAKKWERKFSDAIQSKEEEIRLKEDNCSVLKDQLRQMS 2244
Query: 86 LG--ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQS------DLYKKTQET--LSQ 135
+ ELK N+SR HD Q+ + +T +L +KV + +L + +ET L
Sbjct: 2245 IHMEELKINISRLEHDKQIWESKAQTEVQL---QQKVCDTLQGENKELLSQLEETRHLYH 2301
Query: 136 AGQKTSAALSTVGSAISRKLGDMSS 160
+ Q A L + ++ +L D+S+
Sbjct: 2302 SSQNELAKLESELKSLKDQLTDLSN 2326
>gi|55770878 neuronal pentraxin I precursor [Homo sapiens]
Length = 432
Score = 33.1 bits (74), Expect = 0.19
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 23/147 (15%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T VPVD + A + A G EELR+ + ++ E ++ ++ + +++ EL +LG
Sbjct: 33 TSVPVDADMCAASVAAGGA-----EELRSSVLQLRETVLQQKETILSQKETIRELTAKLG 87
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYK-KTQETLSQAGQKTS 141
S+S D A K + K T DL + ETLSQ GQ T
Sbjct: 88 RCE--------SQSTLDPGAGEARAGGGRK-QPGSGKNTMGDLSRTPAAETLSQLGQ-TL 137
Query: 142 AALSTVGSAISRKLGDMSSYSIRHSIS 168
+L T +L ++ YS +S S
Sbjct: 138 QSLKT-------RLENLEQYSRLNSSS 157
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 32.7 bits (73), Expect = 0.25
Identities = 27/149 (18%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 28 DTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLG 87
DT +A+ ++ + AE E R ++ E+EI +L+ + + C + +R G
Sbjct: 582 DTDIASLQEELKKV-RAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLQG 640
Query: 88 ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTV 147
EL + L + W+ ++ +K L + + +L+ +++L + +S
Sbjct: 641 EL-EKLRKEWNALETECHSLKRENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMSR- 698
Query: 148 GSAISRKLGDMSSYSIRHSISMPAMRNSA 176
+ ++G + +R S + + + A
Sbjct: 699 -KELENQVGSLKEQHLRDSADLKTLLSKA 726
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 32.3 bits (72), Expect = 0.33
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 48 ELRAELTKVEEEIVTLRQVLAAKER------HCGELK----------RRLGLSTLGELKQ 91
E+ A K +EEIVTL + A+++ C ++K R +T ELK
Sbjct: 935 EILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKD 994
Query: 92 NLSRSWHDVQVSSAYVKTSEKLGEWNEK---VTQSDLYKKTQETLSQAGQKTSAALSTVG 148
LS VS VK +++ + +K Q DL KT L + + ALS
Sbjct: 995 QLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKT--VLIEKSHEMERALSRKT 1052
Query: 149 SAISRKLGDMS 159
++++L D+S
Sbjct: 1053 DELNKQLKDLS 1063
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 32.3 bits (72), Expect = 0.33
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 48 ELRAELTKVEEEIVTLRQVLAAKER------HCGELK----------RRLGLSTLGELKQ 91
E+ A K +EEIVTL + A+++ C ++K R +T ELK
Sbjct: 948 EILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKD 1007
Query: 92 NLSRSWHDVQVSSAYVKTSEKLGEWNEK---VTQSDLYKKTQETLSQAGQKTSAALSTVG 148
LS VS VK +++ + +K Q DL KT L + + ALS
Sbjct: 1008 QLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKT--VLIEKSHEMERALSRKT 1065
Query: 149 SAISRKLGDMS 159
++++L D+S
Sbjct: 1066 DELNKQLKDLS 1076
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 32.0 bits (71), Expect = 0.43
Identities = 43/211 (20%), Positives = 80/211 (37%), Gaps = 47/211 (22%)
Query: 37 AVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRL----------GLSTL 86
AVE + + +EL+A + ++ EEI R A E+ +L R L G +T
Sbjct: 1102 AVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATS 1161
Query: 87 GELKQNLSRS---------------WHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQE 131
+++ N R H+ V++ K ++ + E E++ K+ E
Sbjct: 1162 AQVELNKKREAEFQKLRRDLEEATLQHEAMVAALRKKHADSMAELGEQIDNLQRVKQKLE 1221
Query: 132 TLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSK 191
+ + LS+ AIS+ G++ +S ED+V +K+K
Sbjct: 1222 KEKSELKMETDDLSSNAEAISKAKGNLEKMC----------------RSLEDQVSELKTK 1265
Query: 192 ------VVGDRENGSDNLPSSAGSGDKPLSD 216
++ D L + AG + L +
Sbjct: 1266 EEEQQRLINDLTAQRARLQTEAGEYSRQLDE 1296
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 31.6 bits (70), Expect = 0.56
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 28 DTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLG 87
D+ P V LTE + L AE + +E+ LR+ L EL+ TL
Sbjct: 249 DSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEM-----ELRIETQKQTLN 303
Query: 88 ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAAL 144
+++ + +Q K +E+ E ++ +++++ E+L + +K ++ L
Sbjct: 304 ARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSML 360
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 31.6 bits (70), Expect = 0.56
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 28 DTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLG 87
D+ P V LTE + L AE + +E+ LR+ L EL+ TL
Sbjct: 249 DSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEM-----ELRIETQKQTLN 303
Query: 88 ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAAL 144
+++ + +Q K +E+ E ++ +++++ E+L + +K ++ L
Sbjct: 304 ARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSML 360
>gi|215490011 small inducible cytokine subfamily E, member 1 isoform
b precursor [Homo sapiens]
Length = 336
Score = 31.6 bits (70), Expect = 0.56
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 13/154 (8%)
Query: 15 KGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHC 74
KG +D + + + A+ T EE++LR E K+++EI L+Q L E
Sbjct: 38 KGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIEELKQELIQAEIQN 97
Query: 75 G----ELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQ 130
G L + +N+ +S VSS K K G +E KK +
Sbjct: 98 GVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSG-TKEQIKGGTGDE--------KKAK 148
Query: 131 ETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIR 164
E + + G+K ++ + K D+S +R
Sbjct: 149 EKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLR 182
>gi|215490009 small inducible cytokine subfamily E, member 1 isoform
a precursor [Homo sapiens]
Length = 312
Score = 31.6 bits (70), Expect = 0.56
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 13/154 (8%)
Query: 15 KGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHC 74
KG +D + + + A+ T EE++LR E K+++EI L+Q L E
Sbjct: 14 KGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIEELKQELIQAEIQN 73
Query: 75 G----ELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQ 130
G L + +N+ +S VSS K K G +E KK +
Sbjct: 74 GVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSG-TKEQIKGGTGDE--------KKAK 124
Query: 131 ETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIR 164
E + + G+K ++ + K D+S +R
Sbjct: 125 EKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLR 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.123 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,514,802
Number of Sequences: 37866
Number of extensions: 299819
Number of successful extensions: 1636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 1523
Number of HSP's gapped (non-prelim): 188
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.