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Search of human proteins with 40804761
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40804761 nanos homolog 1 [Homo sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40804761 nanos homolog 1 [Homo sapiens] 612 e-175
gi|71143121 nanos homolog 2 [Homo sapiens] 86 4e-17
gi|148886760 nanos homolog 3 [Homo sapiens] 79 6e-15
gi|156416026 zinc finger protein 219 [Homo sapiens] 46 3e-05
gi|156415998 zinc finger protein 219 [Homo sapiens] 46 3e-05
gi|156415996 zinc finger protein 219 [Homo sapiens] 46 3e-05
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 44 2e-04
gi|106879210 Src homology 2 domain containing adaptor protein B ... 40 0.002
gi|122937424 one cut homeobox 3 [Homo sapiens] 40 0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens] 39 0.004
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 38 0.009
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] 38 0.009
gi|117938759 GNAS complex locus XLas [Homo sapiens] 37 0.021
gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 37 0.027
gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 37 0.027
gi|73476377 LBXCOR1 homolog [Homo sapiens] 36 0.035
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 36 0.046
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 36 0.046
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 36 0.046
gi|24497554 homeobox A13 [Homo sapiens] 35 0.060
gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo ... 35 0.060
gi|42822876 hypothetical protein LOC286343 [Homo sapiens] 35 0.078
gi|13994287 BTE-binding protein 4 [Homo sapiens] 35 0.10
gi|91208420 bassoon protein [Homo sapiens] 35 0.10
gi|24497589 aristaless related homeobox [Homo sapiens] 35 0.10
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 35 0.10
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens] 35 0.10
gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens] 35 0.10
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 35 0.10
gi|124430752 kinesin family member 26B [Homo sapiens] 35 0.10
>gi|40804761 nanos homolog 1 [Homo sapiens]
Length = 292
Score = 612 bits (1577), Expect = e-175
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MEAFPWAPRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGE 60
MEAFPWAPRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGE
Sbjct: 1 MEAFPWAPRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGE 60
Query: 61 PRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRG 120
PRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRG
Sbjct: 61 PRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRG 120
Query: 121 RYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEAT 180
RYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEAT
Sbjct: 121 RYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEAT 180
Query: 181 PREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDGRVL 240
PREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDGRVL
Sbjct: 181 PREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDGRVL 240
Query: 241 CPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPPGKKLR 292
CPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPPGKKLR
Sbjct: 241 CPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPPGKKLR 292
>gi|71143121 nanos homolog 2 [Homo sapiens]
Length = 138
Score = 85.9 bits (211), Expect = 4e-17
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 213 VCVFCRNNKEAMALYTTHILKGPDGRVLCPVLRRYTCPLCGASGDNAHTIKYCPLS 268
+C FC++N E+ +Y++H LK PDG V+CP+LR Y CP+CGA+GD AHT+KYCPL+
Sbjct: 62 LCNFCKHNGESRHVYSSHQLKTPDGVVVCPILRHYVCPVCGATGDQAHTLKYCPLN 117
>gi|148886760 nanos homolog 3 [Homo sapiens]
Length = 192
Score = 78.6 bits (192), Expect = 6e-15
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 178 EATPREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDG 237
E P E P + + + + A PE ++C FC++N E+ A+Y +H+LK G
Sbjct: 47 EPMPAPESVPVPGPKDQKRSLESSPA-----PE-RLCSFCKHNGESRAIYQSHVLKDEAG 100
Query: 238 RVLCPVLRRYTCPLCGASGDNAHTIKYCPLS 268
RVLCP+LR Y CP CGA+ + AHT ++CPL+
Sbjct: 101 RVLCPILRDYVCPQCGATRERAHTRRFCPLT 131
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 46.2 bits (108), Expect = 3e-05
Identities = 74/298 (24%), Positives = 96/298 (32%), Gaps = 72/298 (24%)
Query: 5 PWAPRSPRRGRAPPPMALV------PSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVD 58
P P R PP + L+ P+ AP PA + S YL L +A +
Sbjct: 334 PGPASGPARAPQPPDLGLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSL-----RAGE 388
Query: 59 GEPRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPG-ALGPALGPPDYDEDDDDDSDEPG 117
G P NG G P S P + A P A P+ +E+ + +E
Sbjct: 389 GRP--------NGEGAEPGPGRSFGGFRPLSSALPARARRHRAEEPEEEEEVVEAEEETW 440
Query: 118 SRGRYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTS 177
+RGR LGS A L P G A+AA A S
Sbjct: 441 ARGRSLGS----------------------LASLHPRPGEGPG-----HSASAAGAQARS 473
Query: 178 EATPREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDG 237
AT E P GA + C FC + + H L+ G
Sbjct: 474 TATQEENGLLVGGTRPE--GGRGATG--------KDCPFCGKSFRSAHHLKVH-LRVHTG 522
Query: 238 RVLCPVLRRYTCPLCGASGDNAHTIKYC--------PLSKVPPPPARPPPRSARDGPP 287
R Y CP C +G + ++KY P PP PPP S R P
Sbjct: 523 E------RPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAP 574
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 46.2 bits (108), Expect = 3e-05
Identities = 74/298 (24%), Positives = 96/298 (32%), Gaps = 72/298 (24%)
Query: 5 PWAPRSPRRGRAPPPMALV------PSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVD 58
P P R PP + L+ P+ AP PA + S YL L +A +
Sbjct: 334 PGPASGPARAPQPPDLGLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSL-----RAGE 388
Query: 59 GEPRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPG-ALGPALGPPDYDEDDDDDSDEPG 117
G P NG G P S P + A P A P+ +E+ + +E
Sbjct: 389 GRP--------NGEGAEPGPGRSFGGFRPLSSALPARARRHRAEEPEEEEEVVEAEEETW 440
Query: 118 SRGRYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTS 177
+RGR LGS A L P G A+AA A S
Sbjct: 441 ARGRSLGS----------------------LASLHPRPGEGPG-----HSASAAGAQARS 473
Query: 178 EATPREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDG 237
AT E P GA + C FC + + H L+ G
Sbjct: 474 TATQEENGLLVGGTRPE--GGRGATG--------KDCPFCGKSFRSAHHLKVH-LRVHTG 522
Query: 238 RVLCPVLRRYTCPLCGASGDNAHTIKYC--------PLSKVPPPPARPPPRSARDGPP 287
R Y CP C +G + ++KY P PP PPP S R P
Sbjct: 523 E------RPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAP 574
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 46.2 bits (108), Expect = 3e-05
Identities = 74/298 (24%), Positives = 96/298 (32%), Gaps = 72/298 (24%)
Query: 5 PWAPRSPRRGRAPPPMALV------PSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVD 58
P P R PP + L+ P+ AP PA + S YL L +A +
Sbjct: 334 PGPASGPARAPQPPDLGLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSL-----RAGE 388
Query: 59 GEPRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPG-ALGPALGPPDYDEDDDDDSDEPG 117
G P NG G P S P + A P A P+ +E+ + +E
Sbjct: 389 GRP--------NGEGAEPGPGRSFGGFRPLSSALPARARRHRAEEPEEEEEVVEAEEETW 440
Query: 118 SRGRYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTS 177
+RGR LGS A L P G A+AA A S
Sbjct: 441 ARGRSLGS----------------------LASLHPRPGEGPG-----HSASAAGAQARS 473
Query: 178 EATPREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDG 237
AT E P GA + C FC + + H L+ G
Sbjct: 474 TATQEENGLLVGGTRPE--GGRGATG--------KDCPFCGKSFRSAHHLKVH-LRVHTG 522
Query: 238 RVLCPVLRRYTCPLCGASGDNAHTIKYC--------PLSKVPPPPARPPPRSARDGPP 287
R Y CP C +G + ++KY P PP PPP S R P
Sbjct: 523 E------RPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAP 574
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 43.5 bits (101), Expect = 2e-04
Identities = 56/177 (31%), Positives = 68/177 (38%), Gaps = 19/177 (10%)
Query: 5 PWAPRSPRRGRAPPPMAL----VPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGE 60
P P P PPP AL ++ + G H + F D AT A+ G
Sbjct: 158 PPTPSPPPPPPPPPPPALSGYTTTNSGGGGSSGKGHSRDFVLRRDLS--ATAPAAAMHGA 215
Query: 61 PRFGCARGGNGGG---GSPPSSSSSSCCSPHTGAGP-GALGPALGPPDYDEDDDDDSDEP 116
P G R G G PP S+ + T AGP G+ GPAL P +D P
Sbjct: 216 PLGGEQRSGTGSPQHPAPPPHSAGMFISASGTYAGPDGSGGPALFPALHDT--------P 267
Query: 117 GSRGRYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAA 173
G+ G + L L A A A AE PFA R+ G AAAAAA
Sbjct: 268 GAPGGHPHPLNGQMRLGLAAAAAAAAAELYGRAE-PPFAPRSGDAHYGAVAAAAAAA 323
>gi|106879210 Src homology 2 domain containing adaptor protein B
[Homo sapiens]
Length = 509
Score = 40.4 bits (93), Expect = 0.002
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 31/177 (17%)
Query: 44 NDYLGLATLITKAVDGEPR--FGCARGGNGGGGSPP------SSSSSSCCSPHTG----A 91
N Y L TK+ PR + R PP SS++S+ C P T A
Sbjct: 6 NKYFSLGNSKTKSPPQPPRPDYREQRRRGERPSQPPQAVPQASSAASASCGPATASCFSA 65
Query: 92 GPGALGPALGPPD---------YDEDDDDDSDEPGSRGRYLGSALELRALELCAGPAEAG 142
G+L G + D +D + PGS R L + L + C G E G
Sbjct: 66 SSGSLPDDSGSTSDLIRAYRAQKERDFEDPYNGPGSSLRKLRAMCRL---DYCGGSGEPG 122
Query: 143 LLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEATPR-----EERAPAWAAEPR 194
++ F+ S A AA + A AAA++++S +P ER PA AE R
Sbjct: 123 GVQRAFSASS--ASGAAGCCCASSGAGAAASSSSSSGSPHLYRSSSERRPATPAEVR 177
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 40.0 bits (92), Expect = 0.002
Identities = 61/225 (27%), Positives = 77/225 (34%), Gaps = 48/225 (21%)
Query: 64 GCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYL 123
G GG GG G + S+ + G G L PA+G + PG G Y
Sbjct: 56 GGGGGGGGGAGGAGGAGSAGGGADFRGELAGPLHPAMGMA---------CEAPGLGGTYT 106
Query: 124 GSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEATPRE 183
+ L+ L A A+ F AAA A A A A P
Sbjct: 107 -TLTPLQHLPPLAAVADK------------FHQHAAAA------AVAGAHGGHPHAHPHP 147
Query: 184 ERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDGRVLCPV 243
AP P+ AAS + + L++ E AL + L GP G+ L P
Sbjct: 148 AAAPPPPPPPQRLAASVSGSFTLMRDE------------RAALASVGHLYGPYGKEL-PA 194
Query: 244 LRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPPG 288
+ PL A H PPP PPP A GPPG
Sbjct: 195 MGSPLSPLPNALPPALH-------GAPQPPPPPPPPPLAAYGPPG 232
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 39.3 bits (90), Expect = 0.004
Identities = 65/229 (28%), Positives = 77/229 (33%), Gaps = 41/229 (17%)
Query: 7 APRSPRRGRAPP-----PMALVPSARYVSAP-GPA------HPQPFSSWNDYLGLATLIT 54
AP P GRA P PS R P GPA P P S +
Sbjct: 86 APEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAA 145
Query: 55 KAVDGEPRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSD 114
A EP A G P + ++ + P G GPG GP G P
Sbjct: 146 VAAGPEP----APAGPAKPAGPAALAARAGPGPGPGPGPGP-GPGPGKPA---------- 190
Query: 115 EPGSRGRYLGSALELRALELCA--------GPAEAGLLEERFA-----ELSPFAGRAAAV 161
PG+ GSA L + A GPA L + A + PF G AA
Sbjct: 191 GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPP 250
Query: 162 LLGC-APAAAAAATTTSEATPREERAPAWAAEPRLHAASGAAAARLLKP 209
+P AA A + A P APA A P H A AA + P
Sbjct: 251 APAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPP 299
Score = 36.6 bits (83), Expect = 0.027
Identities = 74/285 (25%), Positives = 99/285 (34%), Gaps = 47/285 (16%)
Query: 16 APPPMALVPS--ARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGEPRFGCARGGNGGG 73
A P ++LV + A + P PA P ++G A A P
Sbjct: 211 AAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 74 GSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYLGSALELRALE 133
PP + ++ P AGP PA+ PP ++ GS G
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG-------GSAG------------- 310
Query: 134 LCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAAT---TTSEATPREERAPAWA 190
A PA A P AG A V P AAAAA +E+ R +A A
Sbjct: 311 --AAPAPA-----------PAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPA 357
Query: 191 AEPRLHAASG---AAAARLLKPELQVCVFCRNNKEAMALYT-THILKGPDGRVLCPVLRR 246
A+ AASG AA+ ++ P +Q + A T T + KG G V + R
Sbjct: 358 AQTL--AASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSR- 414
Query: 247 YTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPPGKKL 291
P SG A ++P PP P PPG L
Sbjct: 415 --TPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVL 457
Score = 32.7 bits (73), Expect = 0.39
Identities = 60/228 (26%), Positives = 70/228 (30%), Gaps = 48/228 (21%)
Query: 86 SPHTGAGPGALGPALGPPDY-DEDDDDDSDEPGSRGRYLGSALELRALELCAGPAEAGLL 144
SP AG G PA G P E PG G R + AGPA
Sbjct: 66 SPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA-- 123
Query: 145 EERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEATPREERAPAWAAEPRLHAASGAAAA 204
A+L P +A CAP AAAA E APA A+P AA A A
Sbjct: 124 ----AKLRPPPEGSAG---SCAPVPAAAAVAAGP-----EPAPAGPAKPAGPAALAARAG 171
Query: 205 RLLKP--------------------ELQVCVFCRNNKEAMALYTTHILKGPDG-----RV 239
P L N+ A A + + GP +
Sbjct: 172 PGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKP 231
Query: 240 LCPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPP 287
P T P GA+ P P PPA P P + PP
Sbjct: 232 AAPGTVIQTPPFVGAAAP--------PAPAAPSPPAAPAPAAPAAAPP 271
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 38.1 bits (87), Expect = 0.009
Identities = 54/217 (24%), Positives = 76/217 (35%), Gaps = 25/217 (11%)
Query: 39 PFSSWNDYLGLATLITKAVDGEPRFGCARGGNGGGGSPPS------------SSSSSCCS 86
P + W+ + + + +T+AV P A G P + S++S C +
Sbjct: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA 135
Query: 87 PHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYLGSALELRALELCAGPAEAGLLEE 146
A P A+ A+ PP + +A + A LCA A +
Sbjct: 136 SPPAAVPAAVPAAVRPPAA-------GPPAAALAAVYPAAADPSAASLCAASPLAAVP-- 186
Query: 147 RFAELSPFAGRAAAVLLGCAPAAAAAATTTSEATPREERAPAWAAEPRLHAASGAAAARL 206
A SP A AAV G A +AA+ S+ A AA P A + AAAAR
Sbjct: 187 --AAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPL--AVNPAAAARA 242
Query: 207 LKPELQVCVFCRNNKEAMALYTTHILKGPDGRVLCPV 243
CV A L + P V C V
Sbjct: 243 AAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAV 279
>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
Length = 315
Score = 38.1 bits (87), Expect = 0.009
Identities = 42/134 (31%), Positives = 50/134 (37%), Gaps = 32/134 (23%)
Query: 68 GGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYLGSAL 127
GG+GGG S P G A GP G EDDD+D DE L
Sbjct: 128 GGSGGG----SRLKPGPQLPGRGGRRAAGGPLGGGAAAPEDDDEDDDE---------ELL 174
Query: 128 ELRALE---------LCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSE 178
E+R +E + AG A G E G A AAAA+ T + +
Sbjct: 175 EVRLVETPGRELWRMVPAGRAARGQAERAQGPSGE----------GAAAAAAASPTPSED 224
Query: 179 ATPREERAPAWAAE 192
P EE A AAE
Sbjct: 225 EEPEEEEEEAAAAE 238
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 37.0 bits (84), Expect = 0.021
Identities = 48/186 (25%), Positives = 63/186 (33%), Gaps = 32/186 (17%)
Query: 14 GRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGEPRFGCARGGNGGG 73
G+ P P P+A SA A P A +P G G
Sbjct: 371 GKVPSPGYGSPAAGAASADTAARAAP----------------AAPADPDSGATPEDPDSG 414
Query: 74 GSPPSSSSSS-CCSPHTGAGPGA-LGPALGP-PDYDEDDDDDSDEPGSRGRYLGSALELR 130
+P S + P +GA P A P G PD D D + G+A E
Sbjct: 415 TAPADPDSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAPADPDAGAAPE-- 472
Query: 131 ALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEATPREERAPAWA 190
PA E R A ++P A A G A AA+AT ++ APA
Sbjct: 473 ------APAAPAAAETRAAHVAPAAPDA-----GAPTAPAASATRAAQVRRAASAAPASG 521
Query: 191 AEPRLH 196
A ++H
Sbjct: 522 ARRKIH 527
Score = 35.4 bits (80), Expect = 0.060
Identities = 55/194 (28%), Positives = 68/194 (35%), Gaps = 32/194 (16%)
Query: 16 APPPMALVP-SARYVSAPG--PAHPQPFSSWNDYLGLATLITKAVDGEPRFGCARGGNGG 72
+PPP +P A S G P QP + GL A+ F AR G GG
Sbjct: 95 SPPPEEAMPFEAEQPSLGGFWPTLEQPGFPSGVHAGLEAF-GPALMEPGAFSGARPGLGG 153
Query: 73 GGSPPSSS--------SSSCCSPH-------TGAGPGALGPALGPPDYDEDDDDDSDEPG 117
PP + + CS GPGA G PP+ E + G
Sbjct: 154 YSPPPEEAMPFEFDQPAQRGCSQLLLQVPDLAPGGPGAAGVPGAPPE--EPQALRPAKAG 211
Query: 118 SRGRYLGSALELRALELCAGPAEAGLLEERFAELSPFAG--RAAAVLLGCAPAAAAAATT 175
SRG Y E EL E F + SP G R A + G + AA AA++
Sbjct: 212 SRGGYSPPPEETMPFELDG---------EGFGDDSPPPGLSRVIAQVDGSSQFAAVAASS 262
Query: 176 TSEATPREERAPAW 189
TP P W
Sbjct: 263 AVRLTPAANAPPLW 276
>gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo
sapiens]
Length = 258
Score = 36.6 bits (83), Expect = 0.027
Identities = 47/176 (26%), Positives = 59/176 (33%), Gaps = 32/176 (18%)
Query: 11 PRRGRAPPPMALVPSARYVSAPGPAHPQPFSS---------WNDYLGLATLITKAVDGEP 61
P GRA P ++VP G P P + W L L L+ P
Sbjct: 101 PEPGRAASPGSMVPGPPAPPPSGDQQPAPSAGSGSTADLPEWPWPLQLLLLLA------P 154
Query: 62 RFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGP--ALGPPDYDEDDDDDSDEPGSR 119
GCARG G G + + S S+ P T + PG P G P + PG
Sbjct: 155 GRGCARGRAGEGRAQCAGSPSTAPRPRTCSSPGRATPHRPAGQPSH----------PGGA 204
Query: 120 G---RYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAA 172
G R G A L LCA L + + P G+ P A A
Sbjct: 205 GCCPRVCGPA--AGCLPLCASHPVLAHLPRQSGVVGPVHGQPPPHFRKGTPEVAGA 258
>gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo
sapiens]
Length = 258
Score = 36.6 bits (83), Expect = 0.027
Identities = 47/176 (26%), Positives = 59/176 (33%), Gaps = 32/176 (18%)
Query: 11 PRRGRAPPPMALVPSARYVSAPGPAHPQPFSS---------WNDYLGLATLITKAVDGEP 61
P GRA P ++VP G P P + W L L L+ P
Sbjct: 101 PEPGRAASPGSMVPGPPAPPPSGDQQPAPSAGSGSTADLPEWPWPLQLLLLLA------P 154
Query: 62 RFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGP--ALGPPDYDEDDDDDSDEPGSR 119
GCARG G G + + S S+ P T + PG P G P + PG
Sbjct: 155 GRGCARGRAGEGRAQCAGSPSTAPRPRTCSSPGRATPHRPAGQPSH----------PGGA 204
Query: 120 G---RYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAA 172
G R G A L LCA L + + P G+ P A A
Sbjct: 205 GCCPRVCGPA--AGCLPLCASHPVLAHLPRQSGVVGPVHGQPPPHFRKGTPEVAGA 258
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 36.2 bits (82), Expect = 0.035
Identities = 56/203 (27%), Positives = 69/203 (33%), Gaps = 46/203 (22%)
Query: 19 PMALVPSARY---VSAPGPAHPQPFSSWNDYLGLATLITKAV--DGEPRFGCARGGNGGG 73
P+ VPS + P P P P+ + GL V GEP+ G G GGG
Sbjct: 329 PVIPVPSKGFGLLQKLPPPLFPHPYG-FPTAFGLCPKKDDPVLGAGEPKGGPGTGSGGGG 387
Query: 74 ---GSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYLGSALELR 130
G +S P GAGPG G +P G+A +
Sbjct: 388 AGTGGGAGGPGASHLPPGAGAGPGGGAMFWG------------HQPS------GAAKDAA 429
Query: 131 ALELCAGPAEAGLLEERFAELSPFAG------------RAAAVLLGCAPAAAAAATTTSE 178
A+ A A A + F P AG +A AV A AAAAAA
Sbjct: 430 AV---AAAAAAATVYPTFPMFWPAAGSLPVPSYPAAQSQAKAVAAAVAAAAAAAAAAAGS 486
Query: 179 ATPREERAPAWAAEPRLHAASGA 201
P P AEP + GA
Sbjct: 487 GAPE----PLDGAEPAKESGLGA 505
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 17 PPPMALVPSARYVSAPGPAHPQP-FSSWNDYLGLATLIT----KAVDGEPRFGCARGGNG 71
PPP P A AP H +P F +D L A ++ A A GG G
Sbjct: 287 PPPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAG 346
Query: 72 GGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDY 105
GG + GAG GA A GP Y
Sbjct: 347 TGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSY 380
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 17 PPPMALVPSARYVSAPGPAHPQP-FSSWNDYLGLATLIT----KAVDGEPRFGCARGGNG 71
PPP P A AP H +P F +D L A ++ A A GG G
Sbjct: 287 PPPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAG 346
Query: 72 GGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDY 105
GG + GAG GA A GP Y
Sbjct: 347 TGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSY 380
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 17 PPPMALVPSARYVSAPGPAHPQP-FSSWNDYLGLATLIT----KAVDGEPRFGCARGGNG 71
PPP P A AP H +P F +D L A ++ A A GG G
Sbjct: 287 PPPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAG 346
Query: 72 GGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDY 105
GG + GAG GA A GP Y
Sbjct: 347 TGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSY 380
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 35.4 bits (80), Expect = 0.060
Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 17 PPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGEPRFGCARGGNGGGGSP 76
P P+A ++ Y SAPG A P A A + G G P
Sbjct: 94 PAPLAPGAASAYSSAPGEAPPS---------AAAAAAAAAAAAAAAAAASSSGGPGPAGP 144
Query: 77 PSSSSSSCCSPHTGAGPGALGPALGPPDY 105
+ ++ CSP + A + GPA P Y
Sbjct: 145 AGAEAAKQCSPCSAAAQSSSGPAALPYGY 173
Score = 28.9 bits (63), Expect = 5.6
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 149 AELSPFAGRAAAVLLGCAPAAAAAATTTSEATPREERAPAWAAEPRLHAASGAAAARLLK 208
A L+P A A + G AP +AAAA + A A + + P +GA AA+
Sbjct: 95 APLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCS 154
Query: 209 P 209
P
Sbjct: 155 P 155
>gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo
sapiens]
Length = 201
Score = 35.4 bits (80), Expect = 0.060
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 15 RAPPPMALVPSARYVSAPGPAHPQPFSSWNDYL------GLATLITKAVDGEPRFGCARG 68
RAP P A +P+AR P P P+ SSW + T +P G RG
Sbjct: 77 RAPVPSAPLPAARSPRGPQPLSPR--SSWVRGMPGRGGHQRPLFSTLGAGFQPPLG--RG 132
Query: 69 GNGGGGSPPSSSSSS--CCSP 87
G G GG+P S +SS+ C +P
Sbjct: 133 GAGRGGAPASLASSARPCAAP 153
>gi|42822876 hypothetical protein LOC286343 [Homo sapiens]
Length = 228
Score = 35.0 bits (79), Expect = 0.078
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 58 DGEPRFGCARGGNGGGGS---------PPSSSSSSCCSPHTGAGPGALGPAL 100
D +P G GG GGGG PPS SSSS SP +G+ G+ AL
Sbjct: 39 DRDPCGGSGGGGGGGGGCSSSSSYCSFPPSLSSSSSSSPTSGSPRGSHSSAL 90
Score = 32.7 bits (73), Expect = 0.39
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 68 GGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPP 103
GG GGGG SSSSS C P + + + P G P
Sbjct: 47 GGGGGGGGGCSSSSSYCSFPPSLSSSSSSSPTSGSP 82
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 34.7 bits (78), Expect = 0.10
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 32 PGPAHPQPFSSWNDYLGLAT--LITKAVDGEPRFGCARGGNGGGGSPPSSSSSSCCSPHT 89
PGP P P +S A L+ ++ + R G G GG+ P+SSSS+ SP +
Sbjct: 56 PGPPPPPPAASGPGPGAAAAPHLLAASILADLRGG---PGAAPGGASPASSSSAASSPSS 112
Query: 90 GAGPGA 95
G PGA
Sbjct: 113 GRAPGA 118
Score = 28.5 bits (62), Expect = 7.3
Identities = 46/189 (24%), Positives = 69/189 (36%), Gaps = 26/189 (13%)
Query: 67 RGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYLGSA 126
RG G G+ P++ + A PG GP PP + P +L +A
Sbjct: 27 RGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPPPPAASGPGPGAAAAP-----HLLAA 81
Query: 127 LELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEATPREERA 186
L L G A G A + + A++ G AP AA +A S P + A
Sbjct: 82 SILADLRGGPGAAPGG------ASPASSSSAASSPSSGRAPGAAPSAAAKSHRCPFPDCA 135
Query: 187 PAWAAEPRLHA-ASGAAAARLLKPELQVC--VFCRNNKEAMALYTTHILKGPDGRVLCPV 243
A+ L + R + Q C F R++ E + TH +
Sbjct: 136 KAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSD-ELARHHRTHTGE---------- 184
Query: 244 LRRYTCPLC 252
+R++CPLC
Sbjct: 185 -KRFSCPLC 192
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 34.7 bits (78), Expect = 0.10
Identities = 30/112 (26%), Positives = 36/112 (32%), Gaps = 8/112 (7%)
Query: 75 SPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRGRYLGSALELRALEL 134
+P S S SP LG PD + +PGSR A +
Sbjct: 233 APRSKSQQQLHSPALSPAHSPAKQPLGKPDQERSRGPGGPQPGSRQAETARATSVPGPAQ 292
Query: 135 CAGPAEAGLLEER--------FAELSPFAGRAAAVLLGCAPAAAAAATTTSE 178
A P E G + + AE P AG A A PA A T E
Sbjct: 293 AAAPPEVGRVSPQPPQPTKPSTAEPRPPAGEAPAKSATAVPAGLGATEQTQE 344
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 34.7 bits (78), Expect = 0.10
Identities = 52/186 (27%), Positives = 67/186 (36%), Gaps = 27/186 (14%)
Query: 13 RGRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGEPRFGCARGG--- 69
RG APPP P+AR P A ++ A T + P+ +R
Sbjct: 122 RGEAPPPPP--PTARPGERPDGAGAAAAAA---AAAAAAWDTLKISQAPQVSISRSKSYR 176
Query: 70 -NGGGGSPPSSSSSSCCSPH----------TGAGPGALGPALGPPDYDEDDDDDSDEPGS 118
NG PP + P GPG+ PA G EDD+++ E
Sbjct: 177 ENGAPFVPPPPALDELGGPGGVTHPEERLGVAGGPGS-APAAGGGTGTEDDEEELLEDEE 235
Query: 119 RGRYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSE 178
LE EL A A L E R ++ AAA AAAA AT E
Sbjct: 236 DEDEEEELLEDDEEELLEDDARALLKEPRRCPVAATGAVAAA-------AAAAVATEGGE 288
Query: 179 ATPREE 184
+P+EE
Sbjct: 289 LSPKEE 294
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 34.7 bits (78), Expect = 0.10
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 8 PRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFS-----------SWNDYLGLAT-LITK 55
P+S R G P + R +S P PQP +N Y T ++
Sbjct: 160 PKSSREGSGGPQESS-RDKRPLSGPDVGTPQPAGLASGAKLAAGRPFNTYPRADTDHPSR 218
Query: 56 AVDGEPRFGCARGGNGGGGSPPSSSSSSCCSPHTGAG---PGALGPALGPP 103
GEP G + GG + P SSSSS P G PG LGP P
Sbjct: 219 GAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEP 269
>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 34.7 bits (78), Expect = 0.10
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 8 PRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFS-----------SWNDYLGLAT-LITK 55
P+S R G P + R +S P PQP +N Y T ++
Sbjct: 160 PKSSREGSGGPQESS-RDKRPLSGPDVGTPQPAGLASGAKLAAGRPFNTYPRADTDHPSR 218
Query: 56 AVDGEPRFGCARGGNGGGGSPPSSSSSSCCSPHTGAG---PGALGPALGPP 103
GEP G + GG + P SSSSS P G PG LGP P
Sbjct: 219 GAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEP 269
>gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 34.7 bits (78), Expect = 0.10
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 8 PRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFS-----------SWNDYLGLAT-LITK 55
P+S R G P + R +S P PQP +N Y T ++
Sbjct: 160 PKSSREGSGGPQESS-RDKRPLSGPDVGTPQPAGLASGAKLAAGRPFNTYPRADTDHPSR 218
Query: 56 AVDGEPRFGCARGGNGGGGSPPSSSSSSCCSPHTGAG---PGALGPALGPP 103
GEP G + GG + P SSSSS P G PG LGP P
Sbjct: 219 GAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEP 269
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 34.7 bits (78), Expect = 0.10
Identities = 33/106 (31%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 5 PWAPRSPRRGRAPPPMALVPSARYVSAPGPA----HPQPFSSWNDYLGLATLITKAVDGE 60
P +P SP+ PPP PS + S P P P SS G +T E
Sbjct: 1132 PTSPASPQ----PPPAVAAPSEKN-SIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPE 1186
Query: 61 PRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYD 106
P GG GGG SP + + S P P P+ GP D
Sbjct: 1187 P----TGGGGGGGSSPSPAPAMSPVPPSPSPVPTPASPS-GPATLD 1227
>gi|124430752 kinesin family member 26B [Homo sapiens]
Length = 2108
Score = 34.7 bits (78), Expect = 0.10
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 14 GRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGEPRFGCARGGNG-G 72
G P + + +PGPA P G+ T ++ G P FG G+G G
Sbjct: 67 GTPSPGSGTSSPSSFTGSPGPASP----------GIGTSSPGSLGGSPGFGTGSPGSGSG 116
Query: 73 GGSPPSSSSSSCC 85
GGS P S C
Sbjct: 117 GGSSPGSDRGVWC 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,926,593
Number of Sequences: 37866
Number of extensions: 1063239
Number of successful extensions: 13716
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 11805
Number of HSP's gapped (non-prelim): 2040
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.