Guide to the Human Genome
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Name: TXNDC5 Sequence: fasta or formatted (432aa) NCBI GI: 42794771
Description:

thioredoxin domain containing 5 isoform 1 precursor

Referenced in:

Glutathione Pathways
Additional Protein Modifications

Other entries for this name:
alt prot [324aa] thioredoxin domain containing 5 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         44           6
 C cysteine            2.8         12           1
 D aspartate           5.3         23           2
 E glutamate           7.9         34           2
 F phenylalanine       3.9         17           2
 G glycine             8.6         37           4
 H histidine           3.5         15           1
 I isoleucine          1.9          8           1
 K lysine              6.0         26           2
 L leucine            10.6         46           6
 M methionine          1.2          5           1
 N asparagine          2.1          9           2
 P proline             6.5         28           2
 Q glutamine           4.4         19           1
 R arginine            4.2         18           1
 S serine              4.6         20           1
 T threonine           6.0         26           1
 V valine              5.3         23           1
 W tryptophan          2.1          9           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin domain containing 5 isoform 1 precursor ... 
TXNDC5                0.739   thioredoxin domain containing 5 isoform 3 
PDIA6                 0.137   protein disulfide isomerase A6 
PDIA4                 0.136   protein disulfide isomerase A4 
PDIA5                 0.122   protein disulfide isomerase A5 
DNAJC10               0.108   DnaJ (Hsp40) homolog, subfamily C, member 10 
PDIA3                 0.087   protein disulfide-isomerase A3 precursor 
P4HB                  0.069   prolyl 4-hydroxylase, beta subunit precursor 
TMX3                  0.065   thioredoxin domain containing 10 
PDIA2                 0.063   protein disulfide isomerase A2 
ERP44                 0.049   thioredoxin domain containing 4 (endoplasmic reticul...
QSOX1                 0.044   quiescin Q6 sulfhydryl oxidase 1 isoform b 
QSOX1                 0.044   quiescin Q6 sulfhydryl oxidase 1 isoform a 
QSOX2                 0.041   quiescin Q6 sulfhydryl oxidase 2 
TXN2                  0.033   thioredoxin 2 precursor 
PDILT                 0.033   protein disulfide isomerase-like, testis expressed [...
TMX1                  0.032   thioredoxin domain containing 1 
TMX4                  0.032   thioredoxin-related transmembrane protein 4 
TXN                   0.030   thioredoxin 
TXNL1                 0.026   thioredoxin-like 1 
TXNDC16               0.025   thioredoxin domain containing 16 isoform 2 
TXNDC16               0.025   thioredoxin domain containing 16 isoform 1 
TXNDC2                0.025   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.025   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.025   thioredoxin domain-containing 2 isoform 1 
TXNDC15               0.023   disulfide isomerase 
TMX2                  0.021   thioredoxin domain containing 14 isoform 2 
TMX2                  0.021   thioredoxin domain containing 14 isoform 1 
GLRX3                 0.019   glutaredoxin 3 
TXNDC11               0.016   thioredoxin domain containing 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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