Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 124487387
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|124487387 ring finger protein 207 [Homo sapiens]
(634 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|124487387 ring finger protein 207 [Homo sapiens] 1287 0.0
gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] 81 3e-15
gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] 81 3e-15
gi|30794216 tripartite motif-containing 56 [Homo sapiens] 75 2e-13
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 69 1e-11
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 69 1e-11
gi|67089160 promyelocytic leukemia protein isoform 11 [Homo sapi... 65 2e-10
gi|67089157 promyelocytic leukemia protein isoform 2 [Homo sapiens] 65 2e-10
gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens] 65 2e-10
gi|67089154 promyelocytic leukemia protein isoform 8 [Homo sapiens] 65 2e-10
gi|4505903 promyelocytic leukemia protein isoform 6 [Homo sapiens] 65 2e-10
gi|15451775 promyelocytic leukemia protein isoform 7 [Homo sapiens] 65 2e-10
gi|15451779 promyelocytic leukemia protein isoform 10 [Homo sapi... 65 2e-10
gi|67089149 promyelocytic leukemia protein isoform 1 [Homo sapiens] 65 2e-10
gi|109637788 promyelocytic leukemia protein isoform 5 [Homo sapi... 65 2e-10
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 65 2e-10
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 65 2e-10
gi|5032179 tripartite motif-containing 28 protein [Homo sapiens] 64 3e-10
gi|224548923 tripartite motif-containing 45 isoform 2 [Homo sapi... 59 1e-08
gi|224548921 tripartite motif-containing 45 isoform 1 [Homo sapi... 59 1e-08
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 57 7e-08
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 54 3e-07
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 54 3e-07
gi|15208643 ADP-ribosylation factor domain protein 1 isoform gam... 54 6e-07
gi|15208641 ADP-ribosylation factor domain protein 1 isoform bet... 54 6e-07
gi|4502197 ADP-ribosylation factor domain protein 1 isoform alph... 54 6e-07
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 53 7e-07
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 52 1e-06
gi|15208660 tripartite motif protein 21 [Homo sapiens] 52 2e-06
gi|149193331 tripartite motif protein 15 [Homo sapiens] 52 2e-06
>gi|124487387 ring finger protein 207 [Homo sapiens]
Length = 634
Score = 1287 bits (3331), Expect = 0.0
Identities = 634/634 (100%), Positives = 634/634 (100%)
Query: 1 MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTC 60
MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTC
Sbjct: 1 MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTC 60
Query: 61 PLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCG 120
PLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCG
Sbjct: 61 PLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCG 120
Query: 121 QPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFR 180
QPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFR
Sbjct: 121 QPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFR 180
Query: 181 DMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEE 240
DMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEE
Sbjct: 181 DMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEE 240
Query: 241 DAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF 300
DAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF
Sbjct: 241 DAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF 300
Query: 301 LSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRR 360
LSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRR
Sbjct: 301 LSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRR 360
Query: 361 VAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPF 420
VAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPF
Sbjct: 361 VAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPF 420
Query: 421 AEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIAS 480
AEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIAS
Sbjct: 421 AEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIAS 480
Query: 481 EHASLEGMRVVFQEIWEEAYQRVANEQEIYEAQLHDLLQLRQENAYLTTITKQITPYVRS 540
EHASLEGMRVVFQEIWEEAYQRVANEQEIYEAQLHDLLQLRQENAYLTTITKQITPYVRS
Sbjct: 481 EHASLEGMRVVFQEIWEEAYQRVANEQEIYEAQLHDLLQLRQENAYLTTITKQITPYVRS 540
Query: 541 IAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAASARNNPGSVPEKREKTSEPKGNSWA 600
IAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAASARNNPGSVPEKREKTSEPKGNSWA
Sbjct: 541 IAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAASARNNPGSVPEKREKTSEPKGNSWA 600
Query: 601 PNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT 634
PNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT
Sbjct: 601 PNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT 634
>gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens]
Length = 550
Score = 80.9 bits (198), Expect = 3e-15
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 15/273 (5%)
Query: 58 LTCPLCQHQTVL--KGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYF 115
+TCP C +L +G G P +R+L+ ++D A C L C + E T
Sbjct: 126 ITCPQCHRSLILDDRGLRGFPK-NRVLEGVIDRYQQSKAAA--LKCQL-CEKAPKEATVM 181
Query: 116 CNTCGQPLCARCRDETHRAR-MFARHDIV--ALGQRSRDV-PQK---CTLHA-EPYLLFS 167
C C C CR H R A+H +V A G+ SR + P+K CT H E + ++
Sbjct: 182 CEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYC 241
Query: 168 TDKKLLLCIRCFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQA 227
K+ +C +C + K S L + + +L QA+ + +E + L+
Sbjct: 242 VQCKMPVCYQCLEE-GKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN 300
Query: 228 MVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLL 287
MV++++ ++ E E + A ++ D L RKA LL V ++E K K ++Q+SH L
Sbjct: 301 MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL 360
Query: 288 PTLQVHLVICSSFLSLANKAEFLDLGYELMERL 320
+ C + + + FL + L+ R+
Sbjct: 361 RQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
Score = 33.9 bits (76), Expect = 0.47
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLR 50
L CP+C Y P +L C H+ C C R
Sbjct: 8 LKCPVCGSFYREPIILPCSHNLCQACAR 35
>gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens]
Length = 710
Score = 80.9 bits (198), Expect = 3e-15
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 15/273 (5%)
Query: 58 LTCPLCQHQTVL--KGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYF 115
+TCP C +L +G G P +R+L+ ++D A C L C + E T
Sbjct: 126 ITCPQCHRSLILDDRGLRGFPK-NRVLEGVIDRYQQSKAAA--LKCQL-CEKAPKEATVM 181
Query: 116 CNTCGQPLCARCRDETHRAR-MFARHDIV--ALGQRSRDV-PQK---CTLHA-EPYLLFS 167
C C C CR H R A+H +V A G+ SR + P+K CT H E + ++
Sbjct: 182 CEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYC 241
Query: 168 TDKKLLLCIRCFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQA 227
K+ +C +C + K S L + + +L QA+ + +E + L+
Sbjct: 242 VQCKMPVCYQCLEE-GKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN 300
Query: 228 MVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLL 287
MV++++ ++ E E + A ++ D L RKA LL V ++E K K ++Q+SH L
Sbjct: 301 MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL 360
Query: 288 PTLQVHLVICSSFLSLANKAEFLDLGYELMERL 320
+ C + + + FL + L+ R+
Sbjct: 361 RQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
Score = 33.9 bits (76), Expect = 0.47
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLR 50
L CP+C Y P +L C H+ C C R
Sbjct: 8 LKCPVCGSFYREPIILPCSHNLCQACAR 35
>gi|30794216 tripartite motif-containing 56 [Homo sapiens]
Length = 755
Score = 74.7 bits (182), Expect = 2e-13
Identities = 90/337 (26%), Positives = 137/337 (40%), Gaps = 38/337 (11%)
Query: 12 PSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKG 71
PS L+A S L C +C Q P L C H +C CL A GR+ CP C+ +TV
Sbjct: 8 PSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGRVRCPECR-ETVPVP 66
Query: 72 PSGLPP------VDRLLQFLVDSSGDGVEAVR--CANCDL-ECSEQDVETTYFCNTCGQP 122
P G+ V+ LL + + + A + CA C L + T C C
Sbjct: 67 PEGVASFKTNFFVNGLLDLVKARACGDLRAGKPACALCPLVGGTSTGGPATARCLDCADD 126
Query: 123 LCARCRDETHRARMFARHDIVAL----------GQRSRDVPQKCTLHAEPYLLFSTDK-K 171
LC C D R H +V L R R Q C H L F
Sbjct: 127 LCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQ-CPQHPGEALRFLCQPCS 185
Query: 172 LLLCIRCFRDMQKESRAHCVDLESAY---VQGCERL----EQAVLAVKALQTATREAIAL 224
LLC C D + C+ L A G E L + ++ ++A + +EA+A
Sbjct: 186 QLLCRECRLDPHLDH--PCLPLAEAVRARRPGLEGLLAGVDNNLVELEAARRVEKEALAR 243
Query: 225 LQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLA 284
L+ E+ + E+A G ++ LA+++ +L Q +++ E ++A +E+L+ L
Sbjct: 244 LR---EQAARVGTQVEEAAE---GVLRALLAQKQEVLGQ-LRAHVEAAEEAARERLAELE 296
Query: 285 TLLPTLQVHLVICSSFLSLANKAEFLDLGYELMERLQ 321
+ LSL +AE L L + +RL+
Sbjct: 297 GREQVARAAAAFARRVLSLGREAEILSLEGAIAQRLR 333
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 68.9 bits (167), Expect = 1e-11
Identities = 74/336 (22%), Positives = 129/336 (38%), Gaps = 77/336 (22%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRG--RATDGRLTCPLCQHQTVL--KGPSGLPP- 77
L+C +C +Y+ P +L C H FC CL+ A L+CP+C+ ++L KG + L
Sbjct: 21 LICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNN 80
Query: 78 --VDRLLQFLVDSSGDGVE--------AVRCANCDLECSEQDVET-TYFCNTCGQPLCAR 126
+ L+ L + G E A L C D ++C +C +C
Sbjct: 81 FFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCRE 140
Query: 127 CRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFRDMQKES 186
C + H A H V L +D+ ++
Sbjct: 141 CTEGEH-----AEHPTVPL----------------------------------KDVVEQH 161
Query: 187 RAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHAL 246
+A L+ + AV A+ + ++ ++ + A D IH+
Sbjct: 162 KA--------------SLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKASIVDDIHST 207
Query: 247 FGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF----LS 302
F +Q L RK++LL ++ Y K K + QL TLL Q + CS+F L+
Sbjct: 208 FDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLD---TLLQG-QESIKSCSNFTAQALN 263
Query: 303 LANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKI 338
+ E L + ++ E+L + + L P ++ ++
Sbjct: 264 HGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQL 299
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 68.9 bits (167), Expect = 1e-11
Identities = 74/336 (22%), Positives = 129/336 (38%), Gaps = 77/336 (22%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRG--RATDGRLTCPLCQHQTVL--KGPSGLPP- 77
L+C +C +Y+ P +L C H FC CL+ A L+CP+C+ ++L KG + L
Sbjct: 48 LICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNN 107
Query: 78 --VDRLLQFLVDSSGDGVE--------AVRCANCDLECSEQDVET-TYFCNTCGQPLCAR 126
+ L+ L + G E A L C D ++C +C +C
Sbjct: 108 FFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCRE 167
Query: 127 CRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFRDMQKES 186
C + H A H V L +D+ ++
Sbjct: 168 CTEGEH-----AEHPTVPL----------------------------------KDVVEQH 188
Query: 187 RAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHAL 246
+A L+ + AV A+ + ++ ++ + A D IH+
Sbjct: 189 KA--------------SLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKASIVDDIHST 234
Query: 247 FGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF----LS 302
F +Q L RK++LL ++ Y K K + QL TLL Q + CS+F L+
Sbjct: 235 FDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLD---TLLQG-QESIKSCSNFTAQALN 290
Query: 303 LANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKI 338
+ E L + ++ E+L + + L P ++ ++
Sbjct: 291 HGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQL 326
>gi|67089160 promyelocytic leukemia protein isoform 11 [Homo
sapiens]
Length = 781
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|67089157 promyelocytic leukemia protein isoform 2 [Homo sapiens]
Length = 611
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens]
Length = 829
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|67089154 promyelocytic leukemia protein isoform 8 [Homo sapiens]
Length = 435
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|4505903 promyelocytic leukemia protein isoform 6 [Homo sapiens]
Length = 633
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|15451775 promyelocytic leukemia protein isoform 7 [Homo sapiens]
Length = 423
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|15451779 promyelocytic leukemia protein isoform 10 [Homo
sapiens]
Length = 585
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|67089149 promyelocytic leukemia protein isoform 1 [Homo sapiens]
Length = 882
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|109637788 promyelocytic leukemia protein isoform 5 [Homo
sapiens]
Length = 560
Score = 65.1 bits (157), Expect = 2e-10
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 24/304 (7%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L C C + + P LL C H C+GCL + CP+CQ L + P +D +
Sbjct: 55 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASG----MQCPICQAPWPLGADT--PALDNV- 107
Query: 83 QFLVDSSGDGVEAVR-CANCDLECSEQDVETTYFCNTCGQPLCARCRDE-----THRARM 136
+S + R + C+ ++C C Q LCA+C + H AR
Sbjct: 108 --FFESLQRRLSVYRQIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARP 165
Query: 137 FAR------HDIVALGQRSRDVPQKCTLHAEPYL--LFSTDKKLLLCIRCFRDMQKESRA 188
A + + +++ ++ H P L ++ LC C S
Sbjct: 166 LAELRNQSVREFLDGTRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSEL 225
Query: 189 HCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFG 248
C D+ + Q E L+ A++ +A A + A V ++ + AE E+ I
Sbjct: 226 KC-DISAEIQQRQEELDAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVR 284
Query: 249 SMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAE 308
+ + ++ LL+AV ++Y+ + +L L +L ++ + A+ E
Sbjct: 285 QVVAHVRAQERELLEAVDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQE 344
Query: 309 FLDL 312
LD+
Sbjct: 345 VLDM 348
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 65.1 bits (157), Expect = 2e-10
Identities = 74/341 (21%), Positives = 129/341 (37%), Gaps = 74/341 (21%)
Query: 18 PSIHP-----LVCPLCHVQYERPCLLDCFHDFCAGCLRG--RATDGRLTCPLCQHQTVL- 69
P + P LVC +C +Y+ P +L C H FC CL+ A L+CP+C+ ++L
Sbjct: 10 PEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILP 69
Query: 70 -KGPSGLPP---VDRLLQFLVDSSGDGVEAVR-------CANCDLECSEQDVET-TYFCN 117
+G S L + L++ + + DG A L C + +T ++C
Sbjct: 70 EQGVSALQNNFFISSLME-AMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCE 128
Query: 118 TCGQPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIR 177
C +C CR HR H V L
Sbjct: 129 ACETAMCGECRAGEHR-----EHGTVLL-------------------------------- 151
Query: 178 CFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAA 237
RD+ ++ +A L++ + AV+ AIAL+ + ++++ A
Sbjct: 152 --RDVVEQHKA--------------ALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKA 195
Query: 238 EEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVIC 297
E I A F ++ L +RK L+ +++ K K + QL L +
Sbjct: 196 EALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFA 255
Query: 298 SSFLSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKI 338
L L + E L + + ERL + + RP +++++
Sbjct: 256 EQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQL 296
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 65.1 bits (157), Expect = 2e-10
Identities = 74/341 (21%), Positives = 129/341 (37%), Gaps = 74/341 (21%)
Query: 18 PSIHP-----LVCPLCHVQYERPCLLDCFHDFCAGCLRG--RATDGRLTCPLCQHQTVL- 69
P + P LVC +C +Y+ P +L C H FC CL+ A L+CP+C+ ++L
Sbjct: 10 PEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILP 69
Query: 70 -KGPSGLPP---VDRLLQFLVDSSGDGVEAVR-------CANCDLECSEQDVET-TYFCN 117
+G S L + L++ + + DG A L C + +T ++C
Sbjct: 70 EQGVSALQNNFFISSLME-AMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCE 128
Query: 118 TCGQPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIR 177
C +C CR HR H V L
Sbjct: 129 ACETAMCGECRAGEHR-----EHGTVLL-------------------------------- 151
Query: 178 CFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAA 237
RD+ ++ +A L++ + AV+ AIAL+ + ++++ A
Sbjct: 152 --RDVVEQHKA--------------ALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKA 195
Query: 238 EEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVIC 297
E I A F ++ L +RK L+ +++ K K + QL L +
Sbjct: 196 EALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFA 255
Query: 298 SSFLSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKI 338
L L + E L + + ERL + + RP +++++
Sbjct: 256 EQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQL 296
>gi|5032179 tripartite motif-containing 28 protein [Homo sapiens]
Length = 835
Score = 64.3 bits (155), Expect = 3e-10
Identities = 96/406 (23%), Positives = 153/406 (37%), Gaps = 66/406 (16%)
Query: 25 CPLCHVQYE---RPCLLDCFHDFCAGCLR-------------GRATDGRLT-CPLCQHQT 67
C +C + P LL C H C+ CL G A DG + CP+C+ Q
Sbjct: 65 CGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAANSSGDGGAAGDGTVVDCPVCKQQC 124
Query: 68 VLKGPSGLPPVDRLLQFLVDSSGD--GVEAVRCANCDLECSEQDVETTYFCNTCGQPLCA 125
K D + + + SG +A C C E + T +C C +PLC
Sbjct: 125 FSK--------DIVENYFMRDSGSKAATDAQDANQCCTSC-EDNAPATSYCVECSEPLCE 175
Query: 126 RCRDETHRARMFARHDIVALG-QRSRDVPQK--CTLHA-EPYLLFSTDKKLLLCIRCFRD 181
C + R + H + + G +SRD + C +H EP +LF L C C +
Sbjct: 176 TCVEAHQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLN 235
Query: 182 MQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEED 241
K D + +++ R ++ +LA +L + A LQ +EVR S + D
Sbjct: 236 AHK-------DHQYQFLEDAVRNQRKLLA--SLVKRLGDKHATLQKSTKEVRSSIRQVSD 286
Query: 242 A-------IHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHL 294
+ + L +R +L+ Q E + + + Q T + Q H+
Sbjct: 287 VQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQ-HWTMTKIQKHQEHI 345
Query: 295 VICSSF-LSLANKAEFL---DLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCL 350
+ +S+ L N L L Y + R ++ P + P K D A + +
Sbjct: 346 LRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDP--VEPHGEMKFQWDLNA-WTKSA 402
Query: 351 EPLLLLGPRRVAAAASGANTLAGGLGPKALTGPHCPSPVGKM-SGS 395
E ++ A G N+ GP + P P P+ K SGS
Sbjct: 403 EAF-----GKIVAERPGTNS----TGPAPMAPPRAPGPLSKQGSGS 439
>gi|224548923 tripartite motif-containing 45 isoform 2 [Homo
sapiens]
Length = 562
Score = 58.9 bits (141), Expect = 1e-08
Identities = 87/369 (23%), Positives = 138/369 (37%), Gaps = 58/369 (15%)
Query: 25 CPLCHVQYERPCLLDCFHDFCAGCL-----------RGRATDGR---------------- 57
CPLC ++ P LL C H C CL RG +D
Sbjct: 29 CPLCLGLFKAPRLLPCLHTVCTTCLEQLEPFSVVDIRGGDSDTSSEGSIFQELKPRSLQS 88
Query: 58 ---LTCPLCQHQTVLK-GPSGLPPVDRLLQ---FLVDSSGDGVEAVRCANCDLECSEQDV 110
+ CP+C Q L G +D L L G+G V CDL C++++V
Sbjct: 89 QIGILCPVCDAQVDLPMGGVKALTIDHLAVNDVMLESLRGEGQGLV----CDL-CNDREV 143
Query: 111 ETTYFCNTCGQPLCARCRDETHRARMFARHDIVAL----GQRSRDVPQKCTLH-AEPYLL 165
E C TC LC C R + H +V L G P C +H AE L
Sbjct: 144 EKR--CQTCKANLCHFCCQAHRRQKKTTYHTMVDLKDLKGYSRIGKPILCPVHPAEELRL 201
Query: 166 FSTDKKLLLCIRCFRDMQKESRAHCVDLESAYVQG-----CERLEQAVLAVKALQTATRE 220
F +C C + E R H D S + E L+ V+AL+ A +
Sbjct: 202 FCEFCDRPVCQDC---VVGEHREHPCDFTSNVIHKHGDSVWELLKGTQPHVEALEEALAQ 258
Query: 221 AIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQL 280
+ A+ + V AA+ +++ E + LL+ ++ +K+ + + Q
Sbjct: 259 IHIINSALQKRVEAVAADVRTFSEGYIKAIE----EHRDKLLKQLEDIRAQKENSLQLQK 314
Query: 281 SHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIAS 340
+ L LL ++ + L+ + E L ++ERL+ + + RP + KI
Sbjct: 315 AQLEQLLADMRTGVEFTEHLLTSGSDLEILITKRVVVERLRKLNKVQYSTRPGVNDKIRF 374
Query: 341 DHRAEFARC 349
+ + +C
Sbjct: 375 CPQEKAGQC 383
>gi|224548921 tripartite motif-containing 45 isoform 1 [Homo
sapiens]
Length = 580
Score = 58.9 bits (141), Expect = 1e-08
Identities = 87/369 (23%), Positives = 138/369 (37%), Gaps = 58/369 (15%)
Query: 25 CPLCHVQYERPCLLDCFHDFCAGCL-----------RGRATDGR---------------- 57
CPLC ++ P LL C H C CL RG +D
Sbjct: 29 CPLCLGLFKAPRLLPCLHTVCTTCLEQLEPFSVVDIRGGDSDTSSEGSIFQELKPRSLQS 88
Query: 58 ---LTCPLCQHQTVLK-GPSGLPPVDRLLQ---FLVDSSGDGVEAVRCANCDLECSEQDV 110
+ CP+C Q L G +D L L G+G V CDL C++++V
Sbjct: 89 QIGILCPVCDAQVDLPMGGVKALTIDHLAVNDVMLESLRGEGQGLV----CDL-CNDREV 143
Query: 111 ETTYFCNTCGQPLCARCRDETHRARMFARHDIVAL----GQRSRDVPQKCTLH-AEPYLL 165
E C TC LC C R + H +V L G P C +H AE L
Sbjct: 144 EKR--CQTCKANLCHFCCQAHRRQKKTTYHTMVDLKDLKGYSRIGKPILCPVHPAEELRL 201
Query: 166 FSTDKKLLLCIRCFRDMQKESRAHCVDLESAYVQG-----CERLEQAVLAVKALQTATRE 220
F +C C + E R H D S + E L+ V+AL+ A +
Sbjct: 202 FCEFCDRPVCQDC---VVGEHREHPCDFTSNVIHKHGDSVWELLKGTQPHVEALEEALAQ 258
Query: 221 AIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQL 280
+ A+ + V AA+ +++ E + LL+ ++ +K+ + + Q
Sbjct: 259 IHIINSALQKRVEAVAADVRTFSEGYIKAIE----EHRDKLLKQLEDIRAQKENSLQLQK 314
Query: 281 SHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIAS 340
+ L LL ++ + L+ + E L ++ERL+ + + RP + KI
Sbjct: 315 AQLEQLLADMRTGVEFTEHLLTSGSDLEILITKRVVVERLRKLNKVQYSTRPGVNDKIRF 374
Query: 341 DHRAEFARC 349
+ + +C
Sbjct: 375 CPQEKAGQC 383
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 56.6 bits (135), Expect = 7e-08
Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 37/291 (12%)
Query: 6 FGPLEGPSSLDAPSIHPLVCPLCHVQYERPC-LLDCFHDFCAGCL-------------RG 51
F PL G + L+CP+C + +P +L C H+ C C RG
Sbjct: 7 FKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRG 66
Query: 52 RAT---DGRLTCPLCQHQTVL--KGPSGLPP---VDRLLQFLVDSSGDGVEAVRCANCDL 103
T GR CP C+H+ VL G GL V+ ++ S + + A L
Sbjct: 67 STTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSK--AEQHL 124
Query: 104 ECSEQDVE-TTYFCNTCGQPLCARCR-DETHRARMFARHDIVALGQRSRDVPQKCTLHAE 161
C E + E +C +C P C+ C+ H+ A + Q+ +D+
Sbjct: 125 MCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLT-------- 176
Query: 162 PYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREA 221
LL + C D+ S + ++ + E L + + A +
Sbjct: 177 --LLPRLECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSE-LSDGIAMLVAGNDRVQAV 233
Query: 222 IALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEK 272
I ++ + + + ++ ++ ++ F S+ L ERK LLQA+ + EEK
Sbjct: 234 ITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEK 284
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 54.3 bits (129), Expect = 3e-07
Identities = 75/333 (22%), Positives = 117/333 (35%), Gaps = 68/333 (20%)
Query: 3 GAIFGPLEGPSSLDAP--SIHPL---------VCPLCHVQYE-----RPCLLDCFHDFCA 46
GA+ P P+S AP S P C +C + P LL C H FC
Sbjct: 92 GAVSTPAPAPASAPAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCL 151
Query: 47 GCL------------RGRATD----GRLTCPLCQHQTVLKGPSGLPPVDRLLQFLV---- 86
CL G D G + CP+C+ + +D + + V
Sbjct: 152 RCLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQE--------CRQIDLVDNYFVKDTS 203
Query: 87 --DSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARMFARH---- 140
SS D C +C E + FC CG+ LC C + R + H
Sbjct: 204 EAPSSSDEKSEQVCTSC-----EDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRK 258
Query: 141 ------DIVALGQRSRDVPQKCTLHAEPYL-LFSTDKKLLLCIRCFRDMQKESRAHCVDL 193
+ A GQR P C +H + L LF L C C KE R L
Sbjct: 259 KEDVSESVGASGQR----PVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQF--L 312
Query: 194 ESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDR 253
E A+ +E + + + A +Q ++EV + E I ++ +
Sbjct: 313 EEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 372
Query: 254 LAERKALLLQAVQSQYEEKDKAFKEQLSHLATL 286
+ ++ LLQ +++ +E+ +Q + + L
Sbjct: 373 INKKGKSLLQQLENVTKERQMKLLQQQNDITGL 405
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 54.3 bits (129), Expect = 3e-07
Identities = 75/333 (22%), Positives = 117/333 (35%), Gaps = 68/333 (20%)
Query: 3 GAIFGPLEGPSSLDAP--SIHPL---------VCPLCHVQYE-----RPCLLDCFHDFCA 46
GA+ P P+S AP S P C +C + P LL C H FC
Sbjct: 92 GAVSTPAPAPASAPAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCL 151
Query: 47 GCL------------RGRATD----GRLTCPLCQHQTVLKGPSGLPPVDRLLQFLV---- 86
CL G D G + CP+C+ + +D + + V
Sbjct: 152 RCLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQE--------CRQIDLVDNYFVKDTS 203
Query: 87 --DSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARMFARH---- 140
SS D C +C E + FC CG+ LC C + R + H
Sbjct: 204 EAPSSSDEKSEQVCTSC-----EDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRK 258
Query: 141 ------DIVALGQRSRDVPQKCTLHAEPYL-LFSTDKKLLLCIRCFRDMQKESRAHCVDL 193
+ A GQR P C +H + L LF L C C KE R L
Sbjct: 259 KEDVSESVGASGQR----PVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQF--L 312
Query: 194 ESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDR 253
E A+ +E + + + A +Q ++EV + E I ++ +
Sbjct: 313 EEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 372
Query: 254 LAERKALLLQAVQSQYEEKDKAFKEQLSHLATL 286
+ ++ LLQ +++ +E+ +Q + + L
Sbjct: 373 INKKGKSLLQQLENVTKERQMKLLQQQNDITGL 405
>gi|15208643 ADP-ribosylation factor domain protein 1 isoform gamma
[Homo sapiens]
Length = 546
Score = 53.5 bits (127), Expect = 6e-07
Identities = 65/303 (21%), Positives = 107/303 (35%), Gaps = 38/303 (12%)
Query: 35 PCLLDCFHDFCAGCLRGRATDGR-LTCPLCQHQTVLKGPSG----------LPPVDRLLQ 83
P LL C H C CL GR + CP + T L G SG L ++RL
Sbjct: 46 PRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDL-GDSGVWGLKKNFALLELLERLQN 104
Query: 84 FLVDSSGDGVEAVRCANCDL-ECSEQDVE-TTYFCNTCGQPLCARCRDETHRARMFARHD 141
+ G E++ + + C E + + +C C LC+ C TH + A+H
Sbjct: 105 GPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLAKHR 164
Query: 142 IVALGQRSRDVPQKCTLHAEPYLLF-----STDKKLLLCIRCFRDMQKESRAHCVDLESA 196
V L + + C+ H + F L+C C + + H V A
Sbjct: 165 RVPLADKPHE-KTMCSQHQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEA 223
Query: 197 YVQGCERLEQAVLA---VKALQTATREAIALLQ---------------AMVEEVRHSAAE 238
L+ A + + +R+ + ++Q A E V +A
Sbjct: 224 NQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAEN 283
Query: 239 EEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICS 298
I A F + + L ++ + L V + EK ++Q + LL + + C
Sbjct: 284 ARSCIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCE 343
Query: 299 SFL 301
L
Sbjct: 344 KTL 346
>gi|15208641 ADP-ribosylation factor domain protein 1 isoform beta
[Homo sapiens]
Length = 569
Score = 53.5 bits (127), Expect = 6e-07
Identities = 65/303 (21%), Positives = 107/303 (35%), Gaps = 38/303 (12%)
Query: 35 PCLLDCFHDFCAGCLRGRATDGR-LTCPLCQHQTVLKGPSG----------LPPVDRLLQ 83
P LL C H C CL GR + CP + T L G SG L ++RL
Sbjct: 46 PRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDL-GDSGVWGLKKNFALLELLERLQN 104
Query: 84 FLVDSSGDGVEAVRCANCDL-ECSEQDVE-TTYFCNTCGQPLCARCRDETHRARMFARHD 141
+ G E++ + + C E + + +C C LC+ C TH + A+H
Sbjct: 105 GPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLAKHR 164
Query: 142 IVALGQRSRDVPQKCTLHAEPYLLF-----STDKKLLLCIRCFRDMQKESRAHCVDLESA 196
V L + + C+ H + F L+C C + + H V A
Sbjct: 165 RVPLADKPHE-KTMCSQHQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEA 223
Query: 197 YVQGCERLEQAVLA---VKALQTATREAIALLQ---------------AMVEEVRHSAAE 238
L+ A + + +R+ + ++Q A E V +A
Sbjct: 224 NQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAEN 283
Query: 239 EEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICS 298
I A F + + L ++ + L V + EK ++Q + LL + + C
Sbjct: 284 ARSCIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCE 343
Query: 299 SFL 301
L
Sbjct: 344 KTL 346
>gi|4502197 ADP-ribosylation factor domain protein 1 isoform alpha
[Homo sapiens]
Length = 574
Score = 53.5 bits (127), Expect = 6e-07
Identities = 65/303 (21%), Positives = 107/303 (35%), Gaps = 38/303 (12%)
Query: 35 PCLLDCFHDFCAGCLRGRATDGR-LTCPLCQHQTVLKGPSG----------LPPVDRLLQ 83
P LL C H C CL GR + CP + T L G SG L ++RL
Sbjct: 46 PRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDL-GDSGVWGLKKNFALLELLERLQN 104
Query: 84 FLVDSSGDGVEAVRCANCDL-ECSEQDVE-TTYFCNTCGQPLCARCRDETHRARMFARHD 141
+ G E++ + + C E + + +C C LC+ C TH + A+H
Sbjct: 105 GPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLAKHR 164
Query: 142 IVALGQRSRDVPQKCTLHAEPYLLF-----STDKKLLLCIRCFRDMQKESRAHCVDLESA 196
V L + + C+ H + F L+C C + + H V A
Sbjct: 165 RVPLADKPHE-KTMCSQHQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEA 223
Query: 197 YVQGCERLEQAVLA---VKALQTATREAIALLQ---------------AMVEEVRHSAAE 238
L+ A + + +R+ + ++Q A E V +A
Sbjct: 224 NQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAEN 283
Query: 239 EEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICS 298
I A F + + L ++ + L V + EK ++Q + LL + + C
Sbjct: 284 ARSCIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCE 343
Query: 299 SFL 301
L
Sbjct: 344 KTL 346
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 53.1 bits (126), Expect = 7e-07
Identities = 61/232 (26%), Positives = 88/232 (37%), Gaps = 30/232 (12%)
Query: 87 DSSGDGVEAVRCANCDLECSEQDVETTY---FCNTC-----GQP----LCARCRDETHRA 134
D S + E CA C L+ V T FC C GQP C CR+ + +
Sbjct: 5 DLSTNLQEEATCAIC-LDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQR 63
Query: 135 RMFARHDIVALGQRSR------DVPQK-CTLHAEPYLLFSTDKKLLLCIRCFRDMQKESR 187
+ + + + +R VPQ C H EP F D+ LLC C R E
Sbjct: 64 NLRPNRPLAKMAEMARRLHPPSPVPQGVCPAHREPLAAFCGDELRLLCAACERS--GEHW 121
Query: 188 AHCV--------DLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEE 239
AH V DL++ + E L + + Q E L Q MVE R + E
Sbjct: 122 AHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQNVLGE 181
Query: 240 EDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQ 291
+ + L + +L +R V + E +Q +HLA L+ L+
Sbjct: 182 FERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELE 233
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 52.4 bits (124), Expect = 1e-06
Identities = 76/364 (20%), Positives = 135/364 (37%), Gaps = 66/364 (18%)
Query: 46 AGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFLVDSSGDGVEAVR------ 97
A C ++ +TCP C L +G G +RLL+ +V G AV
Sbjct: 145 AACSSLSSSSSSITCPQCHRSASLDHRGLRGFQR-NRLLEAIVQRYQQGRGAVPGTSAAA 203
Query: 98 ----CANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRAR-MFARHDIVAL------- 145
C CD E C C C+ C+ + H +R FA+H +V
Sbjct: 204 AVAICQLCDRTPPEP---AATLCEQCDVLYCSACQLKCHPSRGPFAKHRLVQPPPPPPPP 260
Query: 146 ---------------------------------GQRSRDVPQKCTLHAEPYLLFSTDKKL 172
G +R P E Y ++ +
Sbjct: 261 AEAASGPTGTAQGAPSGGGGCKSPGGAGAGATGGSTARKFPTCPEHEMENYSMYCVSCRT 320
Query: 173 LLCIRCFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEV 232
+C C + + ++ L + + Q +L QA+ V +E + L+ +++++
Sbjct: 321 PVCYLCLEE-GRHAKHEVKPLGAMWKQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQI 379
Query: 233 RHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQV 292
+ + + E + A ++ D L +KA LL V + E K K +Q++H L
Sbjct: 380 QENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTG 439
Query: 293 HLVICSSFLSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCL-- 350
+ C + + + FL + L++R+Q V++ ++ K++ AEF L
Sbjct: 440 LMEYCLEVIKENDPSGFLQISDALIKRVQ--VSQEQWVKGALEPKVS----AEFDLTLDS 493
Query: 351 EPLL 354
EPLL
Sbjct: 494 EPLL 497
Score = 32.3 bits (72), Expect = 1.4
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 18/82 (21%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
L CP+C + P +L C H+ C C R A ++ P G L
Sbjct: 5 LKCPVCGSLFREPIILPCSHNVCLPCARTIA---------------VQTPDG---EQHLP 46
Query: 83 QFLVDSSGDGVEAVRCANCDLE 104
Q L+ S G G++A A LE
Sbjct: 47 QPLLLSRGSGLQAGAAAAASLE 68
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 52.0 bits (123), Expect = 2e-06
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 15/246 (6%)
Query: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLL 82
+ CP+C + P ++C H FC C+ G CP+C+ + +LK L P +R L
Sbjct: 14 VTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLK---NLRP-NRQL 69
Query: 83 QFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARMFARHDI 142
+V++ + + R C+ FC G+ LC C ++R H +
Sbjct: 70 ANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVCA----QSRKHRDHAM 125
Query: 143 VALGQRSRDVPQKCTLH-AEPYLLFSTDKKLLLCIRCFR-DMQKESRAHCVDLESAYVQG 200
V L + +++ +K + E +KL + I R D +K + + +VQ
Sbjct: 126 VPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQKSRIHAEFVQQ 185
Query: 201 CERL-EQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERKA 259
L E+ ++ L+ RE + +L E A++ A+ L + R
Sbjct: 186 KNFLVEEEQRQLQELEKDEREQLRIL----GEKEAKLAQQSQALQELISELDRRCHSSAL 241
Query: 260 LLLQAV 265
LLQ V
Sbjct: 242 ELLQEV 247
>gi|149193331 tripartite motif protein 15 [Homo sapiens]
Length = 465
Score = 52.0 bits (123), Expect = 2e-06
Identities = 70/289 (24%), Positives = 113/289 (39%), Gaps = 52/289 (17%)
Query: 12 PSSLDAPSIHPL-VCPLCHVQYERPCLLDCFHDFCAGCL-----RGRATDGR-LTCPLCQ 64
P++ +H L C LC E + C H FC CL G + G+ L CPLCQ
Sbjct: 2 PATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQ 61
Query: 65 HQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLC 124
+ + P P+ L + C E + +FC + LC
Sbjct: 62 EEEQAETPMAPVPLGPL-------------------GETYCEEHGEKIYFFCENDAEFLC 102
Query: 125 ARCRD-ETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFRDM- 182
CR+ TH+A H + L + + + E ST++ + ++C D
Sbjct: 103 VFCREGPTHQA-----HTVGFLDEAIQPYRDRLRSRLE---ALSTERDEIEDVKCQEDQK 154
Query: 183 ------QKESRAHCVDLESAYVQGCERLEQAVLAVKALQTA-TREAIALLQAMVEEVRHS 235
Q ES+ H +E+A+ ERL+Q + + L A RE + +E
Sbjct: 155 LQVLLTQIESKKH--QVETAF----ERLQQELEQQRCLLLARLRELEQQIWKERDEYITK 208
Query: 236 AAEEEDAIHALFGSMQDRLAERKALLLQAV---QSQYEEKDKAFKEQLS 281
+EE + A ++++ + + LLQ V QS+ E K E +S
Sbjct: 209 VSEEVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAIS 257
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,333,653
Number of Sequences: 37866
Number of extensions: 1206918
Number of successful extensions: 6424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 5835
Number of HSP's gapped (non-prelim): 735
length of query: 634
length of database: 18,247,518
effective HSP length: 108
effective length of query: 526
effective length of database: 14,157,990
effective search space: 7447102740
effective search space used: 7447102740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.