Search of human proteins with 124358904

Search of human proteins with 124358904

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|124358904 hypothetical protein LOC23201 [Homo sapiens]
         (235 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|124358904 hypothetical protein LOC23201 [Homo sapiens]             500   e-142
gi|112734857 hypothetical protein LOC130074 [Homo sapiens]            256   1e-68
gi|116284392 mucin 2 precursor [Homo sapiens]                          50   2e-06
gi|222418647 mucin 7, secreted precursor [Homo sapiens]                50   2e-06
gi|222418649 mucin 7, secreted precursor [Homo sapiens]                50   2e-06
gi|222418645 mucin 7, secreted precursor [Homo sapiens]                50   2e-06
gi|151301154 mucin 6, gastric [Homo sapiens]                           45   7e-05
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]             44   1e-04
gi|150417989 cyclin K isoform 1 [Homo sapiens]                         43   2e-04
gi|31543535 R3H domain containing 1 [Homo sapiens]                     42   6e-04
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    40   0.001
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]           40   0.002
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         39   0.003
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s...    39   0.004
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    39   0.005
gi|194097341 period 1 [Homo sapiens]                                   38   0.007
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]             38   0.007
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]              38   0.007
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s...    38   0.009
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s...    38   0.009
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s...    38   0.009
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap...    38   0.009
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ...    38   0.009
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ...    38   0.009
gi|188536004 zinc finger protein 469 [Homo sapiens]                    38   0.009
gi|91982772 mucin 17 [Homo sapiens]                                    38   0.009
gi|161019170 mucin 5AC [Homo sapiens]                                  37   0.011
gi|27436927 synoviolin 1 isoform b [Homo sapiens]                      37   0.011
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi...    37   0.011

>gi|124358904 hypothetical protein LOC23201 [Homo sapiens]
          Length = 235

 Score =  500 bits (1287), Expect = e-142
 Identities = 235/235 (100%), Positives = 235/235 (100%)

Query: 1   MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWP 60
           MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWP
Sbjct: 1   MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWP 60

Query: 61  QNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNP 120
           QNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNP
Sbjct: 61  QNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNP 120

Query: 121 YQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPR 180
           YQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPR
Sbjct: 121 YQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPR 180

Query: 181 TNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW 235
           TNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW
Sbjct: 181 TNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW 235


>gi|112734857 hypothetical protein LOC130074 [Homo sapiens]
          Length = 195

 Score =  256 bits (654), Expect = 1e-68
 Identities = 130/237 (54%), Positives = 152/237 (64%), Gaps = 44/237 (18%)

Query: 1   MNPVYSPVQPGAPYGNPKNMAY-TGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAW 59
           MNPVYSP   G PY N K + Y  G+P  Y AAAPAY+P++YP  +P++           
Sbjct: 1   MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTF----------- 49

Query: 60  PQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPN 119
                             TG              YT GTPYKV  + ++ A PPYS SPN
Sbjct: 50  -----------------QTG--------------YTPGTPYKVSCSPTSGAVPPYSSSPN 78

Query: 120 PYQTAMYPIRSAYPQQNLYAQ-GAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAA 178
           PYQTA+YP+RSAYPQQ+ YAQ G YYTQP+YAA PHVIHHTTVVQPN +P+ +YPAP+  
Sbjct: 79  PYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPP 138

Query: 179 PRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW 235
           PR NGV MGMVAGTTMAMSAGTLLT    T +  HPV++PTYRA GTP YSYVPP W
Sbjct: 139 PRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW 195


>gi|116284392 mucin 2 precursor [Homo sapiens]
          Length = 5179

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 62/242 (25%), Positives = 78/242 (32%), Gaps = 31/242 (12%)

Query: 3    PVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQN 62
            P  +P  P      P        PT  P   P    +L PT +PS  P T       P  
Sbjct: 1519 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP--PTT 1576

Query: 63   SSSCGTEGTFHLP-VDTGTENRTYQASSAAFRYTAGTPYK----------VPPTQSNTAP 111
            + S  T  T   P + T T   T   S      T   P             PPT + T P
Sbjct: 1577 TPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1636

Query: 112  PPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAI 171
            P  +PSP P  T   P  +              + P        I  TT   P + PS+ 
Sbjct: 1637 PTTTPSPPPTTTTTPPPTTT------------PSPPTTTTPSPPITTTTTPPPTTTPSSP 1684

Query: 172  YPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYV 231
                 + P T    M   + TT   S  T  TTP  T   + P   PT     +P  +  
Sbjct: 1685 ITTTPSPPTT---TMTTPSPTTTPSSPITTTTTPSSTTTPSPP---PTTMTTPSPTTTPS 1738

Query: 232  PP 233
            PP
Sbjct: 1739 PP 1740



 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 54/214 (25%), Positives = 67/214 (31%), Gaps = 31/214 (14%)

Query: 3    PVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQN 62
            P  +P  P      P        PT  P   PA   +L PT +PS  P T       P  
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPS--PPTTTTTTPPPTT 1537

Query: 63   SSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQ 122
            + S  T      P  T T   T          T  +P   PPT + T PP  +PSP    
Sbjct: 1538 TPSPPTTTPITPPTSTTTLPPT----------TTPSP---PPTTTTTPPPTTTPSPPTTT 1584

Query: 123  TAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTN 182
            T   P  +              T P     P     TT   P   P+     P   P T 
Sbjct: 1585 TPSPPTITT-------------TTPPPTTTPSPPTTTTTTPP---PTTTPSPPTTTPITP 1628

Query: 183  GVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVS 216
              +   +  TT      T  TTP  T   + P +
Sbjct: 1629 PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 1662



 Score = 36.6 bits (83), Expect = 0.019
 Identities = 46/196 (23%), Positives = 63/196 (32%), Gaps = 19/196 (9%)

Query: 26   PTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTY 85
            PT  P+  P    +L PT +PS  P T       P  + S         P+ T T     
Sbjct: 1402 PTTTPSPPPTSTTTLPPTTTPS--PPTTTTTTPPPTTTPSP--------PITTTTTPPPT 1451

Query: 86   QASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMY---PIRSAYPQQN--LYAQ 140
               S     T   P    P+   T P P + +P+P  T      P  +  P     +   
Sbjct: 1452 TTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPP 1511

Query: 141  GAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGT 200
             +  T P           TT   P + PS     P   P T   +   +  TT      T
Sbjct: 1512 ASTTTLPPTTTPSPPTTTTTTPPPTTTPS----PPTTTPITPPTSTTTLPPTTTPSPPPT 1567

Query: 201  LLTTPQHTAIGAHPVS 216
              TTP  T   + P +
Sbjct: 1568 TTTTPPPTTTPSPPTT 1583



 Score = 35.0 bits (79), Expect = 0.056
 Identities = 53/243 (21%), Positives = 70/243 (28%), Gaps = 24/243 (9%)

Query: 1    MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYP-TNSPSYAPATLLMKQAW 59
            + P  +P     P   P     T  PT  P       P+  P T + +  P         
Sbjct: 3977 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQT--PTTTPITTTTTVTPTPTPTGTQT 4034

Query: 60   PQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYT-------AGTPYKVPPTQSNTAPP 112
            P  +    T      P  TGT+  T    +     T         TP   P T + T  P
Sbjct: 4035 PTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP 4094

Query: 113  PYSPS--PNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSA 170
              +P+    P  T +    +  P           T P+          TT V P   P+ 
Sbjct: 4095 TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPTPTPTG 4146

Query: 171  IYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSY 230
                P   P T       V  T       T  TTP  T     P   PT    G P ++ 
Sbjct: 4147 TQ-TPTTTPITTTTT---VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPTHTS 4202

Query: 231  VPP 233
              P
Sbjct: 4203 TAP 4205



 Score = 32.7 bits (73), Expect = 0.28
 Identities = 32/116 (27%), Positives = 40/116 (34%), Gaps = 17/116 (14%)

Query: 103  PPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVV 162
            PPT + T PP  +PSP P  T   P  +  P   +       T P        I  TT  
Sbjct: 1409 PPTSTTTLPPTTTPSP-PTTTTTTPPPTTTPSPPITTT---TTPPPTTTPSPPISTTTTP 1464

Query: 163  QPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMP 218
             P + PS   P    +P            TT      T  TTP  T   + P + P
Sbjct: 1465 PPTTTPSP--PTTTPSP-----------PTTTPSPPTTTTTTPPPTTTPSPPTTTP 1507


>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 62/215 (28%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 6   SPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSS 65
           S V   AP  +P     T  P    A  PA   S  P  + +  P      QA P  SSS
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPP--SSS 206

Query: 66  CGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAM 125
              E T   P    T      +SSA    TA      PPT S T P P S S  P  TA+
Sbjct: 207 APPETTAAPPTPPATTPAP-PSSSAPPETTAA-----PPTPSATTPAPLSSSAPPETTAV 260

Query: 126 YPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNS-IPSAIYPAPVAAPRTNGV 184
            P  SA       A       P   A P     TT   P+S  P     AP+  P ++  
Sbjct: 261 PPTPSATTLDPSSAS----APPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPT 316

Query: 185 AMGM-VAGTTMAMSAGTLLTTPQHTAIGAHPVSMP 218
            +    + T+ A +  T  +    T     P S P
Sbjct: 317 TLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAP 351


>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 62/215 (28%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 6   SPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSS 65
           S V   AP  +P     T  P    A  PA   S  P  + +  P      QA P  SSS
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPP--SSS 206

Query: 66  CGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAM 125
              E T   P    T      +SSA    TA      PPT S T P P S S  P  TA+
Sbjct: 207 APPETTAAPPTPPATTPAP-PSSSAPPETTAA-----PPTPSATTPAPLSSSAPPETTAV 260

Query: 126 YPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNS-IPSAIYPAPVAAPRTNGV 184
            P  SA       A       P   A P     TT   P+S  P     AP+  P ++  
Sbjct: 261 PPTPSATTLDPSSAS----APPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPT 316

Query: 185 AMGM-VAGTTMAMSAGTLLTTPQHTAIGAHPVSMP 218
            +    + T+ A +  T  +    T     P S P
Sbjct: 317 TLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAP 351


>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 62/215 (28%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 6   SPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSS 65
           S V   AP  +P     T  P    A  PA   S  P  + +  P      QA P  SSS
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPP--SSS 206

Query: 66  CGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAM 125
              E T   P    T      +SSA    TA      PPT S T P P S S  P  TA+
Sbjct: 207 APPETTAAPPTPPATTPAP-PSSSAPPETTAA-----PPTPSATTPAPLSSSAPPETTAV 260

Query: 126 YPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNS-IPSAIYPAPVAAPRTNGV 184
            P  SA       A       P   A P     TT   P+S  P     AP+  P ++  
Sbjct: 261 PPTPSATTLDPSSAS----APPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPT 316

Query: 185 AMGM-VAGTTMAMSAGTLLTTPQHTAIGAHPVSMP 218
            +    + T+ A +  T  +    T     P S P
Sbjct: 317 TLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAP 351


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 37/235 (15%)

Query: 5    YSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSS 64
            +SP    +P+ +   M  T + T      P++  +  PT+ P +              S+
Sbjct: 1969 HSPPTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTTLPTHVPPF--------------ST 2014

Query: 65   SCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTA 124
            S  T  T  + + T T+  T  +  +    T   P  +  T S    PP + + +     
Sbjct: 2015 SLVTPSTHTVIITTHTQMATSASIHSTPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQT 2074

Query: 125  MYPIRSAYPQQNLYAQGAYYTQ---------PVYAAQPHVIHHTTVVQP-NSIPSAIYPA 174
                 +A    +  +  ++  Q         P+    PH+   TT V   N + S+  P+
Sbjct: 2075 HSSFSTATASSSFISSSSWLPQNSSSRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPS 2134

Query: 175  PVA-------------APRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVS 216
            P A             +P+T+  ++G  +    A    T L++  H+++  HP +
Sbjct: 2135 PSAPSTVSSYVPSSHSSPQTSSPSVGTSSSFVSAPVHSTTLSSGSHSSLSTHPTT 2189



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 50/222 (22%), Positives = 73/222 (32%), Gaps = 31/222 (13%)

Query: 30   PAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASS 89
            P  A +      P ++    P T   +   P+ + +  T  T   P   G   R     +
Sbjct: 1332 PTPATSGTSPTLPKSTNQELPGTTATQTTGPRPTPASTTGPTTPQP---GQPTRPTATET 1388

Query: 90   AAFRYTAGTPYKVPPTQSNTAPPPYSPSPNP----------YQTAMYPIRSAYPQQNLYA 139
               R T  T Y  P T   T  PP + SP P          + T  YP  S +P+  L  
Sbjct: 1389 TQTRTT--TEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPS-HPETTLPT 1445

Query: 140  QGAYYTQPVYAAQPHVI------HHTTVVQPNSIPSAIYPAPVAAPRTNGVAMG-----M 188
                ++  +     H +         T    +S P+   P P     T            
Sbjct: 1446 HVPPFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPPPTTLKATGSTHTAPPITPT 1505

Query: 189  VAGTTMAMSAGTLLTTP----QHTAIGAHPVSMPTYRAQGTP 226
             +GT+ A S+ +   TP     HT+   HP   PT     TP
Sbjct: 1506 TSGTSQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTSTTTITP 1547



 Score = 36.2 bits (82), Expect = 0.025
 Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 29/175 (16%)

Query: 63   SSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAP---PPYSPS-- 117
            SS   T  T H P  TGT   +      A  +   T Y  P     T P   P +S S  
Sbjct: 1790 SSRLPTPFTTHSP-PTGTTPISSTGPVTATSFQTTTTYPTPSHPHTTLPTHVPSFSTSLV 1848

Query: 118  -PNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPS--AIYPA 174
             P+ + T + P                +TQ   +A  H +   T+  P +I +  + + A
Sbjct: 1849 TPSTH-TVIIPT---------------HTQMATSASIHSMPTGTIPPPTTIKATGSTHTA 1892

Query: 175  PVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYS 229
            P   P T+G +    + +T    A T  + P HT+   HP   PT     TP ++
Sbjct: 1893 PPMTPTTSGTSQSPSSFST----AKTSTSLPYHTSSTHHPEVTPTSTTNITPKHT 1943



 Score = 33.1 bits (74), Expect = 0.21
 Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 35/230 (15%)

Query: 5    YSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSS 64
            +SP     P  +   +  T + T      P++  +  PT+ PS+              S+
Sbjct: 1800 HSPPTGTTPISSTGPVTATSFQTTTTYPTPSHPHTTLPTHVPSF--------------ST 1845

Query: 65   SCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSP-------S 117
            S  T  T  + + T T+  T  +  +    T   P  +  T S    PP +P       S
Sbjct: 1846 SLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTPTTSGTSQS 1905

Query: 118  PNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHV-------IHHTTVVQPNSIPSA 170
            P+ + TA       Y   + +      T        H        + HTT    + +P+ 
Sbjct: 1906 PSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSASSSRLPT- 1964

Query: 171  IYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTY 220
              P    +P T          +T  M+A +  TT  +        ++PT+
Sbjct: 1965 --PFTTHSPPTGSSPF----SSTGPMTATSFQTTTTYPTPSHPQTTLPTH 2008



 Score = 31.6 bits (70), Expect = 0.62
 Identities = 49/248 (19%), Positives = 84/248 (33%), Gaps = 39/248 (15%)

Query: 5    YSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSS 64
            +SP    +P+ +   M  T + T      P++  +  PT+ P +              S+
Sbjct: 1576 HSPPTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTLPTHVPPF--------------ST 1621

Query: 65   SCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTA 124
            S  T  T  +   T  +  T  +  +    T   P  +  T S    P  + + +    A
Sbjct: 1622 SLVTPSTHTVITPTHAQMATSASIHSMPTGTIPPPTTLKATGSTHTAPTMTLTTSGTSQA 1681

Query: 125  MYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGV 184
            +  + +A    +L++    +T   + A+      TT + PN   +   P  V    T+  
Sbjct: 1682 LSSLNTAKTSTSLHS----HTSSTHHAEA-TSTSTTNITPNPTSTGTPPMTVTTSGTSQS 1736

Query: 185  AMGMVAGTTM--------------AMSAGTLLTTPQHTAIG-----AHPVSMPTYRAQGT 225
                    T                 S  T   TP HT+ G     AH  S  + R   T
Sbjct: 1737 RSSFSTAKTSTSLHSHTSSTHHPEVTSTSTTSITPNHTSTGTRTPVAHTTSATSSRLP-T 1795

Query: 226  PAYSYVPP 233
            P  ++ PP
Sbjct: 1796 PFTTHSPP 1803


>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
          Length = 1970

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 25/156 (16%)

Query: 2    NPVYSPVQPG----APYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQ 57
            +P YSP  P     +P  +P +  YT     Y  ++P+Y+PS     SPSY+P +     
Sbjct: 1787 SPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS-----SPSYSPTSPKYTP 1841

Query: 58   AWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAP--PPYS 115
              P  S S         P  T T  + Y  +S  +  T+       PT S T P   P S
Sbjct: 1842 TSPSYSPSS--------PEYTPTSPK-YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1892

Query: 116  PSPNPYQTAMYPIRSAY-PQQNLYAQGAYYTQPVYA 150
            P+ +P      P    Y P    Y+     T P Y+
Sbjct: 1893 PTYSPTSPVYTPTSPKYSPTSPTYSP----TSPKYS 1924



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 13/128 (10%)

Query: 2    NPVYSPVQPG----APYGNPKNMAYTGYPTAYPAAAPAYNPS--LYPTNSPSYAPATLLM 55
            +P YSP  P     +P  +P + +Y+    +Y   +P+Y+PS   Y   SP+Y P++   
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSS--- 1822

Query: 56   KQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAP--PP 113
              ++  +S S       + P        + + +  + +Y+  +P K  PT    +P  P 
Sbjct: 1823 -PSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP-KYSPTSPKYSPTSPT 1880

Query: 114  YSPSPNPY 121
            YSP+   Y
Sbjct: 1881 YSPTTPKY 1888



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 39/193 (20%), Positives = 69/193 (35%), Gaps = 11/193 (5%)

Query: 45   SPSYAPATLLMKQAWPQNSSSCGTEGTF--HLPVDTGTENRTYQASSAAFRYTAGTPYKV 102
            SP Y+PA       W     S G+ G    ++P   G  + +Y  +S A+   +   Y  
Sbjct: 1558 SPGYSPA-------WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTP 1610

Query: 103  PPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVV 162
                 +   P YSP+   Y           P  +  +     T P Y+        T+  
Sbjct: 1611 QSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1670

Query: 163  QPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRA 222
               + PS    +P  +P +   +    + +  + S      +   T+    P S P+Y +
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PSY-S 1728

Query: 223  QGTPAYSYVPPHW 235
              +P+YS   P +
Sbjct: 1729 PTSPSYSPTSPSY 1741



 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 2    NPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAY---NPSLYPTNS 45
            +P YSP  P     +PK   Y+     Y   +P Y   +P++ P +S
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDS 1966


>gi|150417989 cyclin K isoform 1 [Homo sapiens]
          Length = 580

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 43/159 (27%), Positives = 57/159 (35%), Gaps = 14/159 (8%)

Query: 26  PTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTY 85
           P A+PA  P + P   P   P   P++ +   +    SS    EG   L     TE  +Y
Sbjct: 403 PPAHPA--PVHQPPPLPHRPPPPPPSSYMTGMS--TTSSYMSGEGYQSLQSMMKTEGPSY 458

Query: 86  QASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYT 145
            A   A+   A  PY       N  PPP  P P     A +P  +  P    Y       
Sbjct: 459 GALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPP-----ASFPPPAIPPPTPGYPPPPPTY 513

Query: 146 QPVYAAQPHVIHHTTVVQPN-----SIPSAIYPAPVAAP 179
            P +   P  +  T  V P+      +P A YP P   P
Sbjct: 514 NPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPP 552



 Score = 33.1 bits (74), Expect = 0.21
 Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 18/100 (18%)

Query: 99  PYKVPPTQSNTAPPPYSPSPNPYQTAM-----YPIRSAYP--QQNLYAQGAYY--TQPVY 149
           P   PP   +  PPP    P+ Y T M     Y     Y   Q  +  +G  Y    P Y
Sbjct: 409 PVHQPPPLPHRPPPP---PPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAY 465

Query: 150 AAQPHVIHHTTVVQPNSIPSAI------YPAPVAAPRTNG 183
               H+ +H  V  PN  P  +      +P P   P T G
Sbjct: 466 GPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPG 505


>gi|31543535 R3H domain containing 1 [Homo sapiens]
          Length = 1099

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 62/269 (23%), Positives = 91/269 (33%), Gaps = 50/269 (18%)

Query: 9   QPGAPYGNPKN--MAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNS--S 64
           Q G P+ NP    + Y    T  P  +    P   P  +P   PA       + Q++  S
Sbjct: 490 QTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAA---NHIFSQDNLGS 546

Query: 65  SCGTEGTFHLPVDTGTENRTYQASS---------AAFRYTAGTPYKVPPTQSNTAPPPYS 115
                     P   G++       S         + +  TA  P   PP      PPP  
Sbjct: 547 QFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPL 606

Query: 116 PSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQP------VYAAQPHVIHHTTVVQPNSIPS 169
           P   P  TA YP       Q +  Q  Y  QP       Y A  H  +H++  Q   +PS
Sbjct: 607 PPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGH--YHSSQPQYRPVPS 664

Query: 170 AIY------PAPVAAPRTN---------------GV----AMGMVAGTTMAMSAGTLLTT 204
             Y      P P  A +T                GV    +  +V+G   ++        
Sbjct: 665 VHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVV 724

Query: 205 PQHTAIGAHPVSMPTYRAQGTPAYSYVPP 233
             +T++  + VS+P   +QG P  +Y  P
Sbjct: 725 IPYTSVPTYQVSLP-QGSQGIPHQTYQQP 752


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 55/206 (26%), Positives = 70/206 (33%), Gaps = 24/206 (11%)

Query: 30  PAAAPAY--NPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQA 87
           PAAAPA    P+  P   P+ APA +    A P  +S C       +P           A
Sbjct: 98  PAAAPAAVRPPAAGP---PAAAPAAVCPAAADPSAASLCAASPPAAVPA----------A 144

Query: 88  SSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQP 147
             AA R     P   PP  +  A  P +  P+          +A P     A  A     
Sbjct: 145 VPAAVR----PPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC 200

Query: 148 VYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQH 207
             AA P         QP ++P+A  PA  A    N  A    A    A    ++  +P  
Sbjct: 201 PGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPAT 260

Query: 208 TAIGAHPVSMPTYRAQGTPAYSYVPP 233
               A PVS P       P    VPP
Sbjct: 261 PLAIAQPVSFPP-----APVPCAVPP 281


>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
          Length = 463

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 52/240 (21%), Positives = 76/240 (31%), Gaps = 24/240 (10%)

Query: 3   PVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSY---APATLLMKQAW 59
           P   P+ PG P G P  +   G P    A A +    L    +P+    AP   + K  +
Sbjct: 212 PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLF 271

Query: 60  PQ----NSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYS 115
           P      ++  G  GT   P+++     T         YT  T      T S  A P  S
Sbjct: 272 PSAGQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAAS 331

Query: 116 PSPNP--YQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYP 173
            +  P    T     +  +P +++  +      P Y           + +P         
Sbjct: 332 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKY--------QRNLPRPGQ------- 376

Query: 174 APVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPP 233
           AP+  P    +   M     +    G     P H   G H   MP Y     P Y   PP
Sbjct: 377 APIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPP 436


>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 280

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 58/232 (25%), Positives = 83/232 (35%), Gaps = 18/232 (7%)

Query: 2   NPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPA---TLLMKQA 58
           N V S  +   PYG  +    T  P++ P   P+  P+L P ++P+  P    TL     
Sbjct: 32  NWVSSVGEMTGPYGPREMGTPTLTPSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNT 91

Query: 59  WPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVP---PTQSNTAPPPYS 115
                SS  T      P  T +   T   SS      + TP   P   PT + ++ P  +
Sbjct: 92  PTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLT 151

Query: 116 PSPNPYQT-AMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPA 174
           PS  P  T +  P  +      L         P  +++P +   +T   P   PS+    
Sbjct: 152 PSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTP--SSRPILTRSST---PTLTPSS---T 203

Query: 175 PVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTP 226
           P   P +          T +  S  TL  TP  T     P S PT     TP
Sbjct: 204 PTLTPSSTPTLTPSNTPTLIPSSTPTL--TPSSTPT-LTPSSRPTLTRSSTP 252


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 46/199 (23%), Positives = 74/199 (37%), Gaps = 13/199 (6%)

Query: 3    PVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQN 62
            PV +  Q   P   P +   T   +A P  AP   P L P+++ +  PA +      P +
Sbjct: 1620 PVLASSQTPVPVMAPSSTPGTSLASASPVPAPT--PVLAPSSTQTMLPAPVPSPLPSPAS 1677

Query: 63   SSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQ 122
            + +          +   + ++T    +       G P    PTQ+ +  P  S  P P Q
Sbjct: 1678 TQTLALAPALAPTLGGSSPSQTLSLGT-------GNPQGPFPTQTLSLTPASSLVPTPAQ 1730

Query: 123  T-AMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRT 181
            T ++ P     P Q L    A    P     P   H  T+   +S  S + PA V     
Sbjct: 1731 TLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTL 1790

Query: 182  NGV---AMGMVAGTTMAMS 197
            +      +G  A  T+A++
Sbjct: 1791 SPAPVPTLGPAAAQTLALA 1809



 Score = 31.2 bits (69), Expect = 0.81
 Identities = 63/260 (24%), Positives = 91/260 (35%), Gaps = 47/260 (18%)

Query: 6    SPVQPG-APYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNS- 63
            S V P  +P   P +   + +P+A P  APA    L P +S S A AT L   A PQ + 
Sbjct: 1539 STVAPACSPVLVPASALASPFPSA-PNPAPAQASLLAPASSASQALATPLAPMAAPQTAI 1597

Query: 64   -------------------SSCGTEGTFHLPVDTGTENRTYQAS-SAAFRYTAGTPYKVP 103
                                +     +   PV     + T   S ++A    A TP   P
Sbjct: 1598 LAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAP 1657

Query: 104  PTQSNTAPPPY-SPSPNPYQT---AMYP-----IRSAYPQQNL-----YAQGAYYTQPVY 149
             +     P P  SP P+P  T   A+ P     +  + P Q L       QG + TQ + 
Sbjct: 1658 SSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLS 1717

Query: 150  AAQPHVIHHTTVVQPNSIPS---------AIYPAPVAAPRTN-GVAMGMVAGTTMAMSAG 199
                  +  T     +  P          ++ PAP  AP +  G A         A S+ 
Sbjct: 1718 LTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSA 1777

Query: 200  TLLTTPQHTAIGAHPVSMPT 219
            +LL       +   P  +PT
Sbjct: 1778 SLLAPASVQTLTLSPAPVPT 1797



 Score = 30.0 bits (66), Expect = 1.8
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 26/149 (17%)

Query: 10   PGAPYGNPKNMAYTGYPTAYPAA----APAYNPSLYPTNSPS--YAPATLLMKQAWPQNS 63
            PG P G  + ++    P   PA+    APA+  +L P +S +   APA++      P   
Sbjct: 1736 PGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPV 1795

Query: 64   SSCGTEGTFHLPV-DTGTENRTYQASSAAFRYTAGTPYKV------------PPTQSNTA 110
             + G      L +    T++   QASS     +   P  V            P T +  +
Sbjct: 1796 PTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRS 1855

Query: 111  PPPYSPS-------PNPYQTAMYPIRSAY 132
             PP  PS       P P +    P RS +
Sbjct: 1856 GPPSPPSTATSFGGPRPRRQPPPPPRSPF 1884


>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
           sapiens]
          Length = 600

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 40/146 (27%), Positives = 51/146 (34%), Gaps = 10/146 (6%)

Query: 14  YGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFH 73
           YG P +++YT   T       AY  S      P     T    QA+ Q     GT     
Sbjct: 44  YGQPTDVSYTQAQTTATYGQTAYATSY---GQPPTGYTTPTAPQAYSQPVQGYGTGAYDT 100

Query: 74  LPVDTGTENRTYQASSAAFRYTAGTPY------KVPPTQSNTAPPPYSPSPNPYQTAMYP 127
                 T   +Y A SA     A   Y        P + S+T P  Y  S    Q   Y 
Sbjct: 101 TTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTSYSSTQPTSYDQSSYSQQNT-YG 159

Query: 128 IRSAYPQQNLYAQGAYYTQPVYAAQP 153
             S+Y QQ+ Y Q + Y Q    + P
Sbjct: 160 QPSSYGQQSSYGQQSSYGQQPPTSYP 185


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 38/134 (28%), Positives = 47/134 (35%), Gaps = 15/134 (11%)

Query: 103 PPTQSNTAPPPYSPSPN---PYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHT 159
           PP Q    PPP  P P    P+Q   +P    + QQ         ++PV A  P      
Sbjct: 64  PPHQQQQQPPPQQPPPQQPPPHQPPPHP--QPHQQQQPPPPPQDSSKPVVAQGP-----G 116

Query: 160 TVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPT 219
                 S P A   AP A P T+G   G   G T           P     GA P + P+
Sbjct: 117 PAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPP-----GAPPPTPPS 171

Query: 220 YRAQGTPAYSYVPP 233
                TP  +  PP
Sbjct: 172 SGVPTTPPQAGGPP 185


>gi|194097341 period 1 [Homo sapiens]
          Length = 1290

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 42/173 (24%), Positives = 64/173 (36%), Gaps = 22/173 (12%)

Query: 64  SSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAP-PPYSPSPNPYQ 122
           S+ G  G  H P      +   ++ +   R+      + P   S+ +P PP +P P P  
Sbjct: 815 SALGERGCHHGPAPPSRRHHC-RSKAKRSRHHQNPRAEAPCYVSHPSPVPPSTPWPTPPA 873

Query: 123 TAMYP-IRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRT 181
           T  +P +   YP      +G    QP+  A            P S+P A +PAP+  P  
Sbjct: 874 TTPFPAVVQPYPLPVFSPRGG--PQPLPPA------------PTSVPPAAFPAPLVTPMV 919

Query: 182 NGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPH 234
             V    +  T  +   G L T  +     A     P+      PA +  PPH
Sbjct: 920 ALVLPNYLFPTPSSYPYGALQTPAEGPPTPASHSPSPS-----LPALAPSPPH 967


>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
          Length = 617

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 5   YSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPA 51
           YSP  PGA Y +P     +  P   P+ APAY PS  PT +PS APA
Sbjct: 306 YSP-SPGANY-SPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPA 350



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 5   YSPVQPGAPYGNPKNMAYTG--YPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQN 62
           Y+P  P   Y      AYT    PT  P+ APAY PS     +P+Y PA  +     P  
Sbjct: 319 YTP-SPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPS----PAPNYNPAPSVAYSGGPAE 373

Query: 63  SSS 65
            +S
Sbjct: 374 PAS 376



 Score = 28.1 bits (61), Expect = 6.8
 Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)

Query: 33  APAYNPSLYPTNSP------SYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQ 86
           A +Y+P++  +++P      S  PA    K   P+  ++     + + PV   T + +  
Sbjct: 255 ASSYSPAVAASSAPATHTSYSEGPAAPAPK---PRVVTTASIRPSVYQPVPASTYSPSPG 311

Query: 87  ASSAAFRYT-----AGTPYKVP-------PTQSNTAPPPYSPSPNP-YQTAMYPIRSAYP 133
           A+ +   YT     A TP   P       PT + +  P Y+PSP P Y  A     S  P
Sbjct: 312 ANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAYSGGP 371

Query: 134 QQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMV 189
            +   ++  + T   ++ +      TT +   ++P        A P+   +A G V
Sbjct: 372 AEPA-SRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLARGTV 426


>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
          Length = 727

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 5   YSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPA 51
           YSP  PGA Y +P     +  P   P+ APAY PS  PT +PS APA
Sbjct: 416 YSP-SPGANY-SPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPA 460



 Score = 32.3 bits (72), Expect = 0.36
 Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 22/214 (10%)

Query: 27  TAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQ 86
           T  PA++PA +P      + SY+PA           S S G       P        T  
Sbjct: 350 TTAPASSPADSPR---PQASSYSPAVAASSAPATHTSYSEGPAA----PAPKPRVVTTAS 402

Query: 87  ASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQT---AMYPIRSAYPQQNLYAQGAY 143
              + ++    + Y  P   +N +P PY+PSP P  T   A     S  P        AY
Sbjct: 403 IRPSVYQPVPASTYS-PSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAY 461

Query: 144 YTQPV--YAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTL 201
              P   Y   P V +     +P S P  +     +     G +   ++  T+       
Sbjct: 462 TPSPAPNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGG--- 518

Query: 202 LTTPQHTAIGAH--PVSMPT-YRAQGTPAYSYVP 232
              P +T  G    P++  T  RA+  PA S  P
Sbjct: 519 ---PAYTPAGPQVPPLARGTVQRAERFPASSRTP 549



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 5   YSPVQPGAPYGNPKNMAYTG--YPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQN 62
           Y+P  P   Y      AYT    PT  P+ APAY PS     +P+Y PA  +     P  
Sbjct: 429 YTP-SPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPS----PAPNYNPAPSVAYSGGPAE 483

Query: 63  SSS 65
            +S
Sbjct: 484 PAS 486


>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
           sapiens]
          Length = 354

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 50/190 (26%), Positives = 67/190 (35%), Gaps = 41/190 (21%)

Query: 5   YSPVQPGAPYGNPKNMAYTGYP-TAY--PAAAPAYNPSL--YPTNSPSYAPATLLMKQAW 59
           Y+  Q  A YG        G P T Y  P A  AY+  +  Y T +     AT+   QA 
Sbjct: 52  YTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQAS 111

Query: 60  PQNSSSCGTEGTFHL------------PVDTGTENRTYQASSAAFRYT------AGTPYK 101
               S+ GT+  +              P D      T Q  S+   Y         + Y 
Sbjct: 112 YAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYS 171

Query: 102 VP------PTQSNTAPPPYSPS------PNPYQTAMYPIR------SAYPQQNLYAQGAY 143
            P      P Q  TAPP Y P+      P  Y  + Y  +      S+Y QQ+ Y Q + 
Sbjct: 172 YPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSS 231

Query: 144 YTQPVYAAQP 153
           Y Q    + P
Sbjct: 232 YGQQPPTSYP 241


>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
           sapiens]
          Length = 655

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 50/190 (26%), Positives = 67/190 (35%), Gaps = 41/190 (21%)

Query: 5   YSPVQPGAPYGNPKNMAYTGYP-TAY--PAAAPAYNPSL--YPTNSPSYAPATLLMKQAW 59
           Y+  Q  A YG        G P T Y  P A  AY+  +  Y T +     AT+   QA 
Sbjct: 52  YTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQAS 111

Query: 60  PQNSSSCGTEGTFHL------------PVDTGTENRTYQASSAAFRYT------AGTPYK 101
               S+ GT+  +              P D      T Q  S+   Y         + Y 
Sbjct: 112 YAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYS 171

Query: 102 VP------PTQSNTAPPPYSPS------PNPYQTAMYPIR------SAYPQQNLYAQGAY 143
            P      P Q  TAPP Y P+      P  Y  + Y  +      S+Y QQ+ Y Q + 
Sbjct: 172 YPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSS 231

Query: 144 YTQPVYAAQP 153
           Y Q    + P
Sbjct: 232 YGQQPPTSYP 241


>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
           sapiens]
          Length = 661

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 49/189 (25%), Positives = 66/189 (34%), Gaps = 42/189 (22%)

Query: 5   YSPVQPGAPYGNPKNM--AYTGYPTAYPAAAPAYNPSL--YPTNSPSYAPATLLMKQAWP 60
           Y        YG P  +    TGY T  P A  AY+  +  Y T +     AT+   QA  
Sbjct: 61  YGQTAYATSYGQPPTVEGTSTGYTT--PTAPQAYSQPVQGYGTGAYDTTTATVTTTQASY 118

Query: 61  QNSSSCGTEGTFHL------------PVDTGTENRTYQASSAAFRYT------AGTPYKV 102
              S+ GT+  +              P D      T Q  S+   Y         + Y  
Sbjct: 119 AAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSY 178

Query: 103 P------PTQSNTAPPPYSPS------PNPYQTAMYPIR------SAYPQQNLYAQGAYY 144
           P      P Q  TAPP Y P+      P  Y  + Y  +      S+Y QQ+ Y Q + Y
Sbjct: 179 PQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 238

Query: 145 TQPVYAAQP 153
            Q    + P
Sbjct: 239 GQQPPTSYP 247


>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
           sapiens]
          Length = 656

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 50/190 (26%), Positives = 67/190 (35%), Gaps = 41/190 (21%)

Query: 5   YSPVQPGAPYGNPKNMAYTGYP-TAY--PAAAPAYNPSL--YPTNSPSYAPATLLMKQAW 59
           Y+  Q  A YG        G P T Y  P A  AY+  +  Y T +     AT+   QA 
Sbjct: 52  YTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQAS 111

Query: 60  PQNSSSCGTEGTFHL------------PVDTGTENRTYQASSAAFRYT------AGTPYK 101
               S+ GT+  +              P D      T Q  S+   Y         + Y 
Sbjct: 112 YAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYS 171

Query: 102 VP------PTQSNTAPPPYSPS------PNPYQTAMYPIR------SAYPQQNLYAQGAY 143
            P      P Q  TAPP Y P+      P  Y  + Y  +      S+Y QQ+ Y Q + 
Sbjct: 172 YPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSS 231

Query: 144 YTQPVYAAQP 153
           Y Q    + P
Sbjct: 232 YGQQPPTSYP 241


>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
           sapiens]
          Length = 493

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 17/154 (11%)

Query: 69  EGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPI 128
           +G    P+  G E    Q+   A +  A +P++  P      P P +P+  P Q  + P+
Sbjct: 35  QGHAQNPLQVGAE---LQSRFFASQGCAQSPFQAAPAPP---PTPQAPAAEPLQVDLLPV 88

Query: 129 RSAYPQQNLYAQGAYYTQPVYAAQP------HVIHHTTVVQPNSIPSAIYPAPVAAPRTN 182
            +A  +    A  A       AA P        +    + QP + P    P PV+AP   
Sbjct: 89  LAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPP--PPPVSAPAAE 146

Query: 183 GVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVS 216
             A    +  T+A +A T +  P  T +   PV+
Sbjct: 147 --AAPPASAATIAAAAATAVVAPTST-VAVAPVA 177


>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
           sapiens]
          Length = 477

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 17/154 (11%)

Query: 69  EGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPI 128
           +G    P+  G E    Q+   A +  A +P++  P      P P +P+  P Q  + P+
Sbjct: 35  QGHAQNPLQVGAE---LQSRFFASQGCAQSPFQAAPAPP---PTPQAPAAEPLQVDLLPV 88

Query: 129 RSAYPQQNLYAQGAYYTQPVYAAQP------HVIHHTTVVQPNSIPSAIYPAPVAAPRTN 182
            +A  +    A  A       AA P        +    + QP + P    P PV+AP   
Sbjct: 89  LAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPP--PPPVSAPAAE 146

Query: 183 GVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVS 216
             A    +  T+A +A T +  P  T +   PV+
Sbjct: 147 --AAPPASAATIAAAAATAVVAPTST-VAVAPVA 177


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 14/128 (10%)

Query: 7   PVQPGAPYGNPKNMAYTGYPT-----AYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQ 61
           P  PG P    ++M + G P+       P +AP   P + PT  PS     +L +  +P 
Sbjct: 449 PTPPGGPLAATRSMFFNGQPSPGQRLCLPQSAPLPWPQVLPTARPSPHGMEMLSRLPFPA 508

Query: 62  --------NSSSCGTEGTFHLPVDTGTENRTYQASS-AAFRYTAGTPYKVPPTQSNTAPP 112
                   +  + GT G    P +     R+ Q  S A F Y   T     P     A P
Sbjct: 509 GGPEWQGGSQGALGTAGKTPGPREKLPAVRSSQGGSPALFTYNGMTDPGAQPLFFGVAQP 568

Query: 113 PYSPSPNP 120
             SP   P
Sbjct: 569 QVSPHGTP 576


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 54/203 (26%), Positives = 70/203 (34%), Gaps = 31/203 (15%)

Query: 43   TNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKV 102
            T S    P T +     P  SS   T  T   PVDT T   T   +S++           
Sbjct: 2391 TYSEGSTPLTSVPVSTMPVVSSEASTHST--TPVDTSTPVTTSTEASSS----------- 2437

Query: 103  PPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVV 162
            P T   T+ P   PS      A  P+ S  P  +  A G   T PV  + P         
Sbjct: 2438 PTTAEGTSIPTSPPSEGTTPLASMPV-STTPVVSSEA-GTLSTTPVDTSTPMTTSTEASS 2495

Query: 163  QPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAM-SAGTLLTTP-------------QHT 208
             P +    + P   A+  +  +    V+ T +A   A TL TTP               +
Sbjct: 2496 SPTTAEDIVVPISTASEGSTLLTSIPVSTTPVASPEASTLSTTPVDSNSPVVTSTEISSS 2555

Query: 209  AIGAHPVSMP--TYRAQGTPAYS 229
            A  A   SMP  TY    TP  S
Sbjct: 2556 ATSAEGTSMPTSTYSEGSTPLRS 2578



 Score = 34.3 bits (77), Expect = 0.095
 Identities = 58/248 (23%), Positives = 90/248 (36%), Gaps = 53/248 (21%)

Query: 23   TGYPTAYPAAAPA----------YNPSLYPTNSPSY---------------APATLLMKQ 57
            T  PT++P A+ A          + PS    ++P+                 P T +   
Sbjct: 3883 TTLPTSFPGASIASTPPLDTSTTFTPSTDTASTPTIPVATTISVSVITEGSTPGTTIFIP 3942

Query: 58   AWPQNSSSC----GTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYK-VPPTQSNTAPP 112
            + P  SS+      T G    PV T TE  T   SS++   +  T  +   P  +  AP 
Sbjct: 3943 STPVTSSTADVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPL 4002

Query: 113  PY---SPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHV----IHHTTVVQPN 165
             Y   S +P+  +T      ++     L A    +T      +P          + +  +
Sbjct: 4003 TYVTMSTAPSTPRTTSRGCTTS--ASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSH 4060

Query: 166  SIPSAIYPAPVAAPRTNGVAMGMV---AGTTMAM---------SAGTLLTT--PQHTAIG 211
            +IP    PA  + P T   +   V   A TTM           S  T+ TT  P +T I 
Sbjct: 4061 TIPPTFPPAHSSTPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSFPTVTTTAVPTNTTIK 4120

Query: 212  AHPVSMPT 219
            ++P S PT
Sbjct: 4121 SNPTSTPT 4128



 Score = 31.6 bits (70), Expect = 0.62
 Identities = 39/182 (21%), Positives = 58/182 (31%), Gaps = 18/182 (9%)

Query: 27   TAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQ 86
            T   ++ P    +  PT++PS     L          +S  T      P DT T   TY 
Sbjct: 3257 TEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYS 3316

Query: 87   ASSAAFRYTAGTPYKVPPTQSNTAPP--PYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYY 144
             +S++           PP    T+ P   YS    P     +        +         
Sbjct: 3317 QASSS-----------PPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSE----ASTLS 3361

Query: 145  TQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMS-AGTLLT 203
            T PV  + P        + P +      P    +  T  +A   V+ T +  S   TL T
Sbjct: 3362 TTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLST 3421

Query: 204  TP 205
            TP
Sbjct: 3422 TP 3423



 Score = 30.0 bits (66), Expect = 1.8
 Identities = 41/174 (23%), Positives = 57/174 (32%), Gaps = 16/174 (9%)

Query: 34   PAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFR 93
            P    +  PT++PS     L          +S  T      P DT T   TY  +S++  
Sbjct: 1025 PTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSST 1084

Query: 94   YTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQP 153
               GT     PT +      YS    P  +     R     +         T PV  + P
Sbjct: 1085 TADGTSM---PTST------YSEGSTPLTSVPVSTRLVVSSE----ASTLSTTPVDTSIP 1131

Query: 154  HVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMS--AGTLLTTP 205
                      P +      P    +  T  +A  M   TT+ +S  A TL TTP
Sbjct: 1132 VTTSTEASSSPTTAEGTSIPTSPPSEGTTPLA-SMPVSTTLVVSSEANTLSTTP 1184


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 52/210 (24%), Positives = 74/210 (35%), Gaps = 24/210 (11%)

Query: 27   TAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAW------PQNSSSCGT----EGTFHLPV 76
            TA+    P    + + T +PS +P T      W      P  S S  T     GT H P 
Sbjct: 4387 TAHTTKVPTTTTTGF-TVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPT 4445

Query: 77   DTGTENRTY----QASSAAFRYTAGTPY--KVPPTQSNTAPPPYSPSPNPYQTAMYPIRS 130
               T   T      A+ ++   T+GT +   VP T + T     SPS      + + +R+
Sbjct: 4446 VLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRSLSPS------SPHTVRT 4499

Query: 131  AYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVA 190
            A+        G  +         H    TT    +S P+   P P +    +  + G   
Sbjct: 4500 AWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTT 4559

Query: 191  -GTTMAMSAGTLLTTPQHTAIGAHPVSMPT 219
             G T A S  T   TP  T       S PT
Sbjct: 4560 PGHTTATSRTTATATPSKTRTSTLLPSSPT 4589



 Score = 36.6 bits (83), Expect = 0.019
 Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 36/217 (16%)

Query: 27   TAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTE----------GTFH--- 73
            TA+    P    + + T +PS +P T L    W   +++  T           GT H   
Sbjct: 3885 TAHTTKVPTTTTTGF-TATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTAT 3943

Query: 74   -LPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAP------PPYSPSPNPYQTAMY 126
             L   T T      A+ ++   T+GT +  PP  + TA       PP SP         +
Sbjct: 3944 VLTTTTTTVATGSMATPSSSTQTSGTTH-TPPVPNTTATTHGRSLPPSSP---------H 3993

Query: 127  PIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAP-----VAAPRT 181
             +R+A+        G  +         H    TT    +S P+   P P      + P  
Sbjct: 3994 TVRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPALSSPHPSSRTTESPPSP 4053

Query: 182  NGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMP 218
                 G   GT+   +  T   T   T + + P S P
Sbjct: 4054 GTTTPGHTRGTSRTTATATPSKTRTSTLLPSSPTSAP 4090



 Score = 35.8 bits (81), Expect = 0.033
 Identities = 47/201 (23%), Positives = 73/201 (36%), Gaps = 24/201 (11%)

Query: 42   PTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYK 101
            PT +PS  P T      W     S  T  T  +P  +     + +A++   +    T   
Sbjct: 3733 PTATPSSTPGT-----TWILTEPS--TTATVTVPTGSTATASSTRATAGTLKVLTSTA-T 3784

Query: 102  VPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTV 161
             P   S+ A P  SP      TA+  +RS        +  A  +  +  A   +   TT 
Sbjct: 3785 TPTVISSRATPSSSPGT---ATALPALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTT- 3840

Query: 162  VQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYR 221
              P +  S   P+  + P T   +  +   TT   + G++  TP  T   AH   +PT  
Sbjct: 3841 --PTATMSTATPS--STPETVHTSTVLTTTTTTTRATGSV-ATPSSTPGTAHTTKVPTTT 3895

Query: 222  AQG-------TPAYSYVPPHW 235
              G       +P  +  PP W
Sbjct: 3896 TTGFTATPSSSPGTALTPPVW 3916



 Score = 32.7 bits (73), Expect = 0.28
 Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 28   AYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQA 87
            A P+++P    +L    S +  P    +    P  SSS GT  T      T T   +  A
Sbjct: 2646 ATPSSSPGTATALPALRSTATTPTATSVT---PIPSSSLGTTWTRLSQTTTPTATMS-TA 2701

Query: 88   SSAAFRYTAGTPYKVPPTQSNT------APPPYSPSPNPYQTAMYPIRSA--YPQQNLYA 139
            + ++   TA T   +  T + T      A P  S +P    T   P  +   +      +
Sbjct: 2702 TPSSTPETAHTSTVLTATATTTGATGSVATP--SSTPGTAHTTKVPTTTTTGFTATPSSS 2759

Query: 140  QGAYYTQPVYAAQPHV-IHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMG-MVAGTTMAMS 197
             G   T PV+ +         + V P+SIP   + A V    T  VA G M   ++   +
Sbjct: 2760 PGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQT 2819

Query: 198  AGTLLTTP-QHTAIGAHPVSMP 218
            +GT  T P  +T    H  S+P
Sbjct: 2820 SGTTHTPPVPNTMATTHGRSLP 2841



 Score = 31.6 bits (70), Expect = 0.62
 Identities = 44/170 (25%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 52   TLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAP 111
            T L +   P  + S  T  +    V T T   T   ++ A    A TP   P T   T  
Sbjct: 3833 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVA-TPSSTPGTAHTTKV 3891

Query: 112  PPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHV-IHHTTVVQPNSIPSA 170
            P  +       T      S+ P       G   T PV+ +         + V P+SIP  
Sbjct: 3892 PTTTT------TGFTATPSSSP-------GTALTPPVWISTTTTPTTRGSTVTPSSIPGT 3938

Query: 171  IYPAPVAAPRTNGVAMG-MVAGTTMAMSAGTLLTTP-QHTAIGAHPVSMP 218
             + A V    T  VA G M   ++   ++GT  T P  +T    H  S+P
Sbjct: 3939 THTATVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRSLP 3988



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 41/189 (21%), Positives = 67/189 (35%), Gaps = 15/189 (7%)

Query: 43   TNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDT-GTENRTYQASSAAFRYTAGTPYK 101
            T +PS  P T+         +++ G  G+   P  T GT + T   ++    +TA TP  
Sbjct: 3202 TATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVLTTTTTGFTA-TPSS 3260

Query: 102  VPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTV 161
             P T + T P   S +  P         S+ P       G  +T  V       +   ++
Sbjct: 3261 SPGT-ARTLPVWISTTTTPTTRGSTVTPSSIP-------GTTHTPTVLTTTTTTVATGSM 3312

Query: 162  VQPNS---IPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMP 218
              P+S        +  PV  P T     G     +   +  T  T+     +G   ++ P
Sbjct: 3313 ATPSSSTQTSGTTHTPPV--PNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEP 3370

Query: 219  TYRAQGTPA 227
            +     TPA
Sbjct: 3371 STGTSHTPA 3379



 Score = 27.7 bits (60), Expect = 8.9
 Identities = 42/179 (23%), Positives = 63/179 (35%), Gaps = 24/179 (13%)

Query: 43   TNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDT-GTENRTYQASSAAFRYTAGTPYK 101
            T +PS  P T+         +++ G  G+   P  T GT + T   ++    +TA     
Sbjct: 5022 TATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA----- 5076

Query: 102  VPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTV 161
             P +   TA  P  P+  P  T      S+ P+         +T  V          TT 
Sbjct: 5077 TPSSSPGTALTP--PTTTPMSTMSTIHTSSTPETT-------HTSTVLT--------TTA 5119

Query: 162  VQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAM-SAGTLLTTPQHTAIGAHPVSMPT 219
                +  S   P+           +   A TT A  S  TL +TP  T I   P ++ T
Sbjct: 5120 TMTRATNSTATPSSTLGTTRILTELTTTATTTAATGSTATLSSTPGTTWILTEPSTIAT 5178


>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
          Length = 617

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 37/134 (27%), Positives = 49/134 (36%), Gaps = 17/134 (12%)

Query: 104 PTQSNTAPPP--YSPSPNPYQTAMYPIRSAYPQQNL--YAQGAYYTQPVYAAQPHVIHHT 159
           P QS   P P    P P P+   + P    +PQ  L  +  G +   P     P      
Sbjct: 339 PAQSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFP------ 392

Query: 160 TVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPT 219
            V  P S   A+ P     P T+  A+   +G     +AGT  T    TA G    S P 
Sbjct: 393 PVPPPPSSGEAVAP-----PSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAP- 446

Query: 220 YRAQGTPAYSYVPP 233
             A   P + + PP
Sbjct: 447 -EAGPAPGFPFPPP 459


>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 306

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 12/108 (11%)

Query: 26  PTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQ-NSSSCGTEGTFHLPVDTGTENRT 84
           PT  P++ P   PS  PT +PS  P  +L + + P    SS  T    + P  T +   T
Sbjct: 8   PTLTPSSPPTLTPSSTPTLTPSSQP--ILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPT 65

Query: 85  YQASSAAFRYTAGTPYKVP---------PTQSNTAPPPYSPSPNPYQT 123
              SS      + TP   P         PT + ++PP  +PS  P  T
Sbjct: 66  LTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLT 113



 Score = 36.2 bits (82), Expect = 0.025
 Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 4/101 (3%)

Query: 26  PTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTY 85
           PT  P++ P   PS  PT +PS  P TL          SS  T      P+ T +   T 
Sbjct: 174 PTLTPSSTPTLTPSSTPTLTPSSTP-TLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTL 232

Query: 86  QASSAAFRYTAGTPYKVP---PTQSNTAPPPYSPSPNPYQT 123
             SS      + TP   P   PT + +  P  +PS  P  T
Sbjct: 233 TPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLT 273



 Score = 35.4 bits (80), Expect = 0.043
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)

Query: 16  NPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLP 75
           +P  +  +  PT  P+  P   PS  PT +PS  P TL  +    ++S+   T  +   P
Sbjct: 46  SPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP-TLTPQPILTRSSTPTLTPSS--PP 102

Query: 76  VDTGTENRTYQASSAAFRYTAGTPYKVP---PTQSNTAPPPYSPSPNPYQT 123
             T +   T   S+      + TP   P   PT + ++ P  +PS  P  T
Sbjct: 103 TLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILT 153



 Score = 33.1 bits (74), Expect = 0.21
 Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 26  PTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTY 85
           PT  P++ P    S  PT +PS  P TL          SS  T      P+ T +   T 
Sbjct: 158 PTLTPSSRPILTRSSTPTLTPSSTP-TLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTL 216

Query: 86  QASSAAFRYTAGTPYKVP---PTQSNTAPPPYSPSPNPYQT 123
             SS      + TP   P   P  + ++ P  +PS  P  T
Sbjct: 217 TPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLT 257



 Score = 32.7 bits (73), Expect = 0.28
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 26  PTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTY 85
           P++ P   P+  P+L P+N+P+  P++           +   T      P+ T +   T 
Sbjct: 44  PSSPPTLTPSNTPTLTPSNTPTLTPSS-------TPTLTPSSTPTLTPQPILTRSSTPTL 96

Query: 86  QASSAAFRYTAGTPYKVP---PTQSNTAPPPYSPSPNPYQT 123
             SS      + TP   P   PT + +  P  +PS  P  T
Sbjct: 97  TPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLT 137



 Score = 31.6 bits (70), Expect = 0.62
 Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 26  PTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQ-NSSSCGTEGTFHLPVDTGTENRT 84
           PT  P++ P    S  PT +PS  P  +L + + P    SS  T      P  T +   T
Sbjct: 142 PTLTPSSRPILTRSSTPTLTPSSRP--ILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPT 199

Query: 85  YQASSAAFRYTAGTPYKVP---PTQSNTAPPPYSPSPNPYQT 123
              SS      + TP   P   P  + ++ P  +PS  P  T
Sbjct: 200 LTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILT 241



 Score = 28.9 bits (63), Expect = 4.0
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 16  NPKNMAYTGYPTAYPAAAPAYNPSLYPTNSPSYAPATLLMKQAWPQ 61
           N   +  +  PT  P+  P   PS  PT +PS  P TL     W Q
Sbjct: 260 NTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP-TLTPSSLWHQ 304


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.127    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,420,808
Number of Sequences: 37866
Number of extensions: 631136
Number of successful extensions: 4212
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 3255
Number of HSP's gapped (non-prelim): 857
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.