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Search of human proteins with 38327034
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38327034 ubiquitination factor E4B isoform 2 [Homo sapiens]
(1173 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38327034 ubiquitination factor E4B isoform 2 [Homo sapiens] 2336 0.0
gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens] 1820 0.0
gi|38327029 ubiquitination factor E4A [Homo sapiens] 277 5e-74
gi|119943102 CREB binding protein isoform b [Homo sapiens] 43 0.002
gi|119943104 CREB binding protein isoform a [Homo sapiens] 43 0.002
gi|7662344 U-box domain containing 5 isoform a [Homo sapiens] 40 0.013
gi|40806196 U-box domain containing 5 isoform b [Homo sapiens] 40 0.013
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 39 0.022
gi|215422388 death-domain associated protein isoform a [Homo sap... 39 0.022
gi|215422366 death-domain associated protein isoform b [Homo sap... 39 0.022
gi|56181387 STIP1 homology and U-box containing protein 1 [Homo ... 39 0.029
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 38 0.050
gi|50345997 E1A binding protein p300 [Homo sapiens] 38 0.050
gi|189571685 WD repeat, sterile alpha motif and U-box domain con... 38 0.050
gi|189571683 WD repeat, sterile alpha motif and U-box domain con... 38 0.050
gi|189571681 WD repeat, sterile alpha motif and U-box domain con... 38 0.050
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 38 0.065
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 38 0.065
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 38 0.065
gi|150010577 tyrosine kinase, non-receptor, 1 [Homo sapiens] 38 0.065
gi|19924099 synapsin I isoform Ia [Homo sapiens] 37 0.085
gi|19924097 synapsin I isoform Ib [Homo sapiens] 37 0.085
gi|13994287 BTE-binding protein 4 [Homo sapiens] 37 0.14
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 37 0.14
gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens] 37 0.14
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 36 0.19
gi|38176300 nestin [Homo sapiens] 36 0.25
gi|138175817 zinc finger protein 236 [Homo sapiens] 36 0.25
gi|40538736 RAN binding protein 10 [Homo sapiens] 35 0.32
gi|239742580 PREDICTED: similar to Putative POM121-like protein ... 35 0.42
>gi|38327034 ubiquitination factor E4B isoform 2 [Homo sapiens]
Length = 1173
Score = 2336 bits (6053), Expect = 0.0
Identities = 1173/1173 (100%), Positives = 1173/1173 (100%)
Query: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
Sbjct: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
Query: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
Sbjct: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
Query: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
Sbjct: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
Query: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
Sbjct: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
Query: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY 300
RNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY
Sbjct: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY 300
Query: 301 LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV 360
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV
Sbjct: 301 LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV 360
Query: 361 PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG 420
PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG
Sbjct: 361 PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG 420
Query: 421 ELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVE 480
ELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVE
Sbjct: 421 ELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVE 480
Query: 481 KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNANM 540
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNANM
Sbjct: 481 KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNANM 540
Query: 541 KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA 600
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA
Sbjct: 541 KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA 600
Query: 601 TMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT 660
TMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
Sbjct: 601 TMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT 660
Query: 661 VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL 720
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
Sbjct: 661 VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL 720
Query: 721 LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQ 780
LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQ
Sbjct: 721 LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQ 780
Query: 781 DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS 840
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS
Sbjct: 781 DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS 840
Query: 841 LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM 900
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
Sbjct: 841 LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM 900
Query: 901 LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL 960
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL
Sbjct: 901 LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL 960
Query: 961 ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK 1020
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
Sbjct: 961 ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK 1020
Query: 1021 KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE 1080
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
Sbjct: 1021 KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE 1080
Query: 1081 KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP 1140
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
Sbjct: 1081 KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP 1140
Query: 1141 FNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1173
FNRQTLTESMLEPVPELKEQIQAWMREKQNSDH
Sbjct: 1141 FNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1173
>gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
Length = 1302
Score = 1820 bits (4714), Expect = 0.0
Identities = 919/948 (96%), Positives = 920/948 (97%), Gaps = 6/948 (0%)
Query: 229 SQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLS---SLGASGGASNWDSYSD 285
S P A A S R +TG P P S S SSL SLGASGGASNWDSYSD
Sbjct: 358 SSPQAVPASS-SRQRPSSTG--PPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSD 414
Query: 286 HFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQG 345
HFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQG
Sbjct: 415 HFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQG 474
Query: 346 SLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKEC 405
SLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKEC
Sbjct: 475 SLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKEC 534
Query: 406 SLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAF 465
SLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAF
Sbjct: 535 SLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAF 594
Query: 466 FSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETR 525
FSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETR
Sbjct: 595 FSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETR 654
Query: 526 EAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHP 585
EAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHP
Sbjct: 655 EAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHP 714
Query: 586 RCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCR 645
RCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCR
Sbjct: 715 RCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCR 774
Query: 646 RYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGL 705
RYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGL
Sbjct: 775 RYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGL 834
Query: 706 LDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFF 765
LDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFF
Sbjct: 835 LDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFF 894
Query: 766 IVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFE 825
IVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFE
Sbjct: 895 IVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFE 954
Query: 826 MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFM 885
MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFM
Sbjct: 955 MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFM 1014
Query: 886 EEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQS 945
EEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQS
Sbjct: 1015 EEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQS 1074
Query: 946 QLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCR 1005
QLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCR
Sbjct: 1075 QLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCR 1134
Query: 1006 DLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAG 1065
DLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAG
Sbjct: 1135 DLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAG 1194
Query: 1066 IKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMD 1125
IKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMD
Sbjct: 1195 IKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMD 1254
Query: 1126 RSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1173
RSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH
Sbjct: 1255 RSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1302
Score = 527 bits (1357), Expect = e-149
Identities = 276/285 (96%), Positives = 276/285 (96%), Gaps = 3/285 (1%)
Query: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
Sbjct: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
Query: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
Sbjct: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
Query: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
Sbjct: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
Query: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
Sbjct: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
Query: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGA---SNWDS 282
RNLLLNTGSNPGTSPMFCSVASFGASSLSSL S A S W S
Sbjct: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSS 285
>gi|38327029 ubiquitination factor E4A [Homo sapiens]
Length = 1073
Score = 277 bits (708), Expect = 5e-74
Identities = 246/931 (26%), Positives = 434/931 (46%), Gaps = 89/931 (9%)
Query: 294 ETDMLNYLIECFDRVGIEEKKAPKMCSQPAV---SQLLSNIRSQCISHTALVLQGSLTQP 350
E + YL CF R E K P+ AV + +SN R+ ++ V Q Q
Sbjct: 170 ERHIFCYLYSCFQRAKEEITKVPENLLPFAVQCRNLTVSNTRTVLLTPEIYVDQNIHEQL 229
Query: 351 RSLQQPSFLVPYMLCRNLPYG----FIQELVRTTHQDEEV--FKQIFIPILQGLALAAKE 404
L + + + F++E++ DEEV F ++ IP+ L K+
Sbjct: 230 VDLMLEAIQGAREYMNKIYFEDVTEFLEEVIEALILDEEVRTFPEVMIPVFDILLGRIKD 289
Query: 405 CSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGA 464
L L L K +A + + + P G+ Q+ + LG
Sbjct: 290 LELCQILLYAYLDILLYFTRQKD---------MAKVFVEYIQPKDPTNGQMYQK-TLLGV 339
Query: 465 FFSFSVFAEDDVKVVEK--YFSGPAITL-ENTRVVSQSLQHYLELGRQELFKILHSIL-L 520
S S + VVE YF P+ + + +V ++ ++ ++++++L ++L L
Sbjct: 340 ILSISCLLKTP-GVVENHGYFLNPSRSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQL 398
Query: 521 NGETREAALSYMAAVVNANMKKAQMQTDD------RLVSTDGFMLNFLWVLQQLSTKI-- 572
+ ET+ LS++ ++AN + ++ + ++ ++D F LN L +L
Sbjct: 399 SPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCK 458
Query: 573 ----KLETVDPTYIFHPRCRITLPNDETRV--NATMEDVNDWLTELYGDQPPFSEPKFPT 626
+L T +PTY C + NDE R N M ++ + P EPKFP
Sbjct: 459 PRSSRLLTFNPTY-----CALKELNDEERKIKNVHMRGLDKETCLI----PAVQEPKFPQ 509
Query: 627 ECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKD-----SPLATRHR 681
+T + L Y+ R ++ + ++L + W+D SP A R
Sbjct: 510 NYNLVTENL----ALTEYTLYLGFHRLHDQMVKINQNLHRLQVAWRDAQQSSSPAADNLR 565
Query: 682 EMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLLLRIL---DPAYP-DIT 737
E Q ++L+ + + L+ CLN + LL+++ + + P ++T
Sbjct: 566 E-------QFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELT 618
Query: 738 LPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCT--QDIVMFLVVMLCNQNY 795
PL D A +PEF+ +++ +FL F+ +++ L + ++ F+ + +
Sbjct: 619 FPL-PDGYSSLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIER 677
Query: 796 IRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLS------TKLLVPSLMKFYTDVE 849
++NP+L AKL EV+ P + + + L +L+K + D+E
Sbjct: 678 MKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQLAEALIKVFVDIE 737
Query: 850 HTGATSEFYDKFTIRYHISTIFKSLW---------QNIAHHGTFMEEFNSGKQFVRYINM 900
TG +F KF R + I + +W +++A + + E + F+R++N+
Sbjct: 738 FTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNL 797
Query: 901 LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL 960
L+ND FLLDE+++ L +I ++Q+ K++ +WD L + ++ +++ L +++R + +
Sbjct: 798 LMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWDSLTPEARREKEAGLQMFGQLARFHNIM 856
Query: 961 ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK 1020
+ ET+ LT +++ F+ P L R+ +MLN+ LQ L GPK LKV++ ++ F+P+
Sbjct: 857 SNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQ 916
Query: 1021 KLLDQLTDIYLQL-DCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1079
+L+ + IYL L D F + D RSYS LF + + ++K K I F LA
Sbjct: 917 QLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKIN-KPGNMIMAFSNLA 975
Query: 1080 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI-MDRSIILRHLLNSPT 1138
E+++ + + E Y+DA DEF DP+M TLM DPV LPS + +DRS I RHLL+ T
Sbjct: 976 ERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQT 1035
Query: 1139 DPFNRQTLTESMLEPVPELKEQIQAWMREKQ 1169
DPFNR LT + P ELKE+IQ W+ E++
Sbjct: 1036 DPFNRSPLTMDQIRPNTELKEKIQRWLAERK 1066
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 43.1 bits (100), Expect = 0.002
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 20/188 (10%)
Query: 22 TSQPTTPL-----TSPQRENPPGPPIAASAPG-PSQSLGLNVHNMTPATSPIGASGVAHR 75
T QP TP+ +PQ P+ A PG P ++ N P S + AS +
Sbjct: 889 TPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSV-ASAETNS 947
Query: 76 SQSSEGVSSLSSSPSNSLET------QSQSLSRSQSMDIDGVSCEKSMSQVDV-DSGIEN 128
Q V L E +S+ RS+ M+ D + + D+ + E
Sbjct: 948 QQPGPDVPVLEMKTETQAEDTEPDPGESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEP 1007
Query: 129 MEVDENDRREKRSLSDKEPSS--GPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQ 186
MEVDE K + ++E SS G Q KIF K + + +L A
Sbjct: 1008 MEVDEKKPEVKVEVKEEEESSSNGTASQSTSPSQPRKKIF----KPEELRQALMPTLEAL 1063
Query: 187 FKQNPKEV 194
++Q+P+ +
Sbjct: 1064 YRQDPESL 1071
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 43.1 bits (100), Expect = 0.002
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 20/188 (10%)
Query: 22 TSQPTTPL-----TSPQRENPPGPPIAASAPG-PSQSLGLNVHNMTPATSPIGASGVAHR 75
T QP TP+ +PQ P+ A PG P ++ N P S + AS +
Sbjct: 927 TPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSV-ASAETNS 985
Query: 76 SQSSEGVSSLSSSPSNSLET------QSQSLSRSQSMDIDGVSCEKSMSQVDV-DSGIEN 128
Q V L E +S+ RS+ M+ D + + D+ + E
Sbjct: 986 QQPGPDVPVLEMKTETQAEDTEPDPGESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEP 1045
Query: 129 MEVDENDRREKRSLSDKEPSS--GPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQ 186
MEVDE K + ++E SS G Q KIF K + + +L A
Sbjct: 1046 MEVDEKKPEVKVEVKEEEESSSNGTASQSTSPSQPRKKIF----KPEELRQALMPTLEAL 1101
Query: 187 FKQNPKEV 194
++Q+P+ +
Sbjct: 1102 YRQDPESL 1109
>gi|7662344 U-box domain containing 5 isoform a [Homo sapiens]
Length = 541
Score = 40.0 bits (92), Expect = 0.013
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 1098 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNS------PTDPFNRQTLT-ESM 1150
D P+EF DP+ +M P+ LPSG ++D+S + + + P+DPF T S
Sbjct: 258 DVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKCNRSEATWGRVPSDPFTGVAFTPHSQ 317
Query: 1151 LEPVPELKEQIQAWM 1165
P P LK +I ++
Sbjct: 318 PLPHPSLKARIDHFL 332
>gi|40806196 U-box domain containing 5 isoform b [Homo sapiens]
Length = 487
Score = 40.0 bits (92), Expect = 0.013
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 1098 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNS------PTDPFNRQTLT-ESM 1150
D P+EF DP+ +M P+ LPSG ++D+S + + + P+DPF T S
Sbjct: 258 DVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKCNRSEATWGRVPSDPFTGVAFTPHSQ 317
Query: 1151 LEPVPELKEQIQAWM 1165
P P LK +I ++
Sbjct: 318 PLPHPSLKARIDHFL 332
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 39.3 bits (90), Expect = 0.022
Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 19/205 (9%)
Query: 70 SGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENM 129
SG +S+G S S + ++ + + + + + S + D++ E
Sbjct: 415 SGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ 474
Query: 130 EVDENDRREKRSLS----DKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSA 185
E DE + E+ + + DK P S ++S E+ L+ +I R S + +++ I SL +
Sbjct: 475 EDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLS 534
Query: 186 QFK------------QNPKEVFSDFKDLIGQIL---MEVLMMSTQTRDENPFASLTATSQ 230
+ + P+E+ + + + Q+ +E L + T + E +S S+
Sbjct: 535 EEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSE 594
Query: 231 PIAAAARSPDRNLLLNTGSNPGTSP 255
++ +T N G SP
Sbjct: 595 EPFTTVLENGAGMVSSTSFNGGVSP 619
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 39.3 bits (90), Expect = 0.022
Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 19/205 (9%)
Query: 70 SGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENM 129
SG +S+G S S + ++ + + + + + S + D++ E
Sbjct: 415 SGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ 474
Query: 130 EVDENDRREKRSLS----DKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSA 185
E DE + E+ + + DK P S ++S E+ L+ +I R S + +++ I SL +
Sbjct: 475 EDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLS 534
Query: 186 QFK------------QNPKEVFSDFKDLIGQIL---MEVLMMSTQTRDENPFASLTATSQ 230
+ + P+E+ + + + Q+ +E L + T + E +S S+
Sbjct: 535 EEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSE 594
Query: 231 PIAAAARSPDRNLLLNTGSNPGTSP 255
++ +T N G SP
Sbjct: 595 EPFTTVLENGAGMVSSTSFNGGVSP 619
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 39.3 bits (90), Expect = 0.022
Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 19/205 (9%)
Query: 70 SGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENM 129
SG +S+G S S + ++ + + + + + S + D++ E
Sbjct: 427 SGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ 486
Query: 130 EVDENDRREKRSLS----DKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSA 185
E DE + E+ + + DK P S ++S E+ L+ +I R S + +++ I SL +
Sbjct: 487 EDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLS 546
Query: 186 QFK------------QNPKEVFSDFKDLIGQIL---MEVLMMSTQTRDENPFASLTATSQ 230
+ + P+E+ + + + Q+ +E L + T + E +S S+
Sbjct: 547 EEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSE 606
Query: 231 PIAAAARSPDRNLLLNTGSNPGTSP 255
++ +T N G SP
Sbjct: 607 EPFTTVLENGAGMVSSTSFNGGVSP 631
>gi|56181387 STIP1 homology and U-box containing protein 1 [Homo
sapiens]
Length = 303
Score = 38.9 bits (89), Expect = 0.029
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 1098 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-SPTDPFNRQTLTESMLEPVPE 1156
D PD + LM +P PSG DR I HL DP R LT+ L P
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLA 285
Query: 1157 LKEQIQAWMRE 1167
+KE I A++ E
Sbjct: 286 MKEVIDAFISE 296
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 38.1 bits (87), Expect = 0.050
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 74 HRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDE 133
H+S SS SS SSS + + E+ S+S S ++ I +K+ SG N + +E
Sbjct: 255 HKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKC-----SGHNNSDSEE 309
Query: 134 NDRREKRSLSDKEPSS 149
D+ +KR L ++ SS
Sbjct: 310 KDKSKKRKLHEELSSS 325
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 38.1 bits (87), Expect = 0.050
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 18/188 (9%)
Query: 25 PTTPLTSPQRENPPGPPIAASA------PGPSQSLGLNVHNMT-PATSPIGASGVAHRSQ 77
PT P T ++ P P A SA P QS +V T P P A+ ++ +
Sbjct: 886 PTPPTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQPAV 945
Query: 78 SSEG-VSSLSSSPSNSLETQ-------SQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENM 129
S EG VS+ S+ S + +Q SQ + M++D + + +S +E+
Sbjct: 946 SIEGQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPEPADTQPEDISESKVEDC 1005
Query: 130 EVDENDRREKRS---LSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQ 186
+++ + E+ + KE P S Q+ + + +K + + +L A
Sbjct: 1006 KMESTETEERSTELKTEIKEEEDQPSTSATQSSPAPGQSKKKIFKPEELRQALMPTLEAL 1065
Query: 187 FKQNPKEV 194
++Q+P+ +
Sbjct: 1066 YRQDPESL 1073
>gi|189571685 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 38.1 bits (87), Expect = 0.050
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 1061 MRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPS 1120
+ K + + IE L ++ + +I + + S PDEF P+ LM DPV
Sbjct: 366 LTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDPVIASD 425
Query: 1121 GTIMDRSIILRHLLNSP-TDPFNRQTLTESMLEPVPELKEQIQAWMREKQ 1169
G ++ + + T P L ++L P LK I W+ Q
Sbjct: 426 GYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQ 475
>gi|189571683 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 38.1 bits (87), Expect = 0.050
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 1061 MRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPS 1120
+ K + + IE L ++ + +I + + S PDEF P+ LM DPV
Sbjct: 366 LTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDPVIASD 425
Query: 1121 GTIMDRSIILRHLLNSP-TDPFNRQTLTESMLEPVPELKEQIQAWMREKQ 1169
G ++ + + T P L ++L P LK I W+ Q
Sbjct: 426 GYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQ 475
>gi|189571681 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 38.1 bits (87), Expect = 0.050
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 1061 MRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPS 1120
+ K + + IE L ++ + +I + + S PDEF P+ LM DPV
Sbjct: 366 LTKESLADDLKIESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDPVIASD 425
Query: 1121 GTIMDRSIILRHLLNSP-TDPFNRQTLTESMLEPVPELKEQIQAWMREKQ 1169
G ++ + + T P L ++L P LK I W+ Q
Sbjct: 426 GYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQ 475
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 37.7 bits (86), Expect = 0.065
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 14 LARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVA 73
++ L G+ + T P P G + +APG + GL + T+P
Sbjct: 1277 ISGLPSGEVLETTAPGVEEISGLPSGEVLETTAPGVDEISGLPSGEVLETTAP------- 1329
Query: 74 HRSQSSEGVSSLSSSPSNS-LETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVD 132
GV +S PS LET + ++ + G E S+S V+ SG+ + EV
Sbjct: 1330 -------GVEEISGLPSGEVLETSTSAVGDLSGLPSGGEVLEISVSGVEDISGLPSGEVV 1382
Query: 133 ENDRREKRSLSDKEPSSGPEVS 154
E +S+ G E S
Sbjct: 1383 ETSASGIEDVSELPSGEGLETS 1404
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 37.7 bits (86), Expect = 0.065
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 14 LARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVA 73
++ L G+ + T P P G + +APG + GL + T+P
Sbjct: 1277 ISGLPSGEVLETTAPGVEEISGLPSGEVLETTAPGVDEISGLPSGEVLETTAP------- 1329
Query: 74 HRSQSSEGVSSLSSSPSNS-LETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVD 132
GV +S PS LET + ++ + G E S+S V+ SG+ + EV
Sbjct: 1330 -------GVEEISGLPSGEVLETSTSAVGDLSGLPSGGEVLEISVSGVEDISGLPSGEVV 1382
Query: 133 ENDRREKRSLSDKEPSSGPEVS 154
E +S+ G E S
Sbjct: 1383 ETSASGIEDVSELPSGEGLETS 1404
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 37.7 bits (86), Expect = 0.065
Identities = 28/98 (28%), Positives = 39/98 (39%)
Query: 54 GLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSC 113
G N + A+S + + S SS SS SSS S+S + S S S S S S
Sbjct: 2596 GTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2655
Query: 114 EKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGP 151
S S S + DE+ + P++GP
Sbjct: 2656 SSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGP 2693
Score = 33.5 bits (75), Expect = 1.2
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 43 AASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSR 102
AAS S S + + + ++S +S + S SS SS SSS S+S + S S S
Sbjct: 2609 AASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2668
Query: 103 SQSMDIDGVSC 113
S S + SC
Sbjct: 2669 SSSTTDEDSSC 2679
>gi|150010577 tyrosine kinase, non-receptor, 1 [Homo sapiens]
Length = 661
Score = 37.7 bits (86), Expect = 0.065
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 16 RLAGGQTSQPTTPLTSPQRENPPG----PPIAASAPGPSQSLGLNV---HNMTPATSPIG 68
R GG +S P + PPG PP+++S+P PSQ + P P+G
Sbjct: 507 RPTGGGSSPPEIRQARAVPQGPPGLPPRPPLSSSSPQPSQPSRERLPWPKRKPPHNHPMG 566
Query: 69 ASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVS---CEKSMSQV--DVD 123
G + S G+ S + + Q + + GV+ C+ ++ DV
Sbjct: 567 MPGARKAAALSGGLLS---------DPELQRKIMEVELSVHGVTHQECQTALGATGGDVV 617
Query: 124 SGIENMEVDENDRREKRSLSD 144
S I N++VD+ RS +D
Sbjct: 618 SAIRNLKVDQLFHLSSRSRAD 638
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 37.4 bits (85), Expect = 0.085
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 11 RRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGAS 70
RRRL+ + + P +T QR PP PP A +PG + G + +P A+
Sbjct: 5 RRRLSD-SNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAP--AA 61
Query: 71 GVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVS 112
A S S G SS SN+++ + + + + S + G S
Sbjct: 62 SPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGS 103
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 37.4 bits (85), Expect = 0.085
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 11 RRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGAS 70
RRRL+ + + P +T QR PP PP A +PG + G + +P A+
Sbjct: 5 RRRLSD-SNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAP--AA 61
Query: 71 GVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVS 112
A S S G SS SN+++ + + + + S + G S
Sbjct: 62 SPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGS 103
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 36.6 bits (83), Expect = 0.14
Identities = 22/61 (36%), Positives = 28/61 (45%)
Query: 31 SPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPS 90
SP PP PP AAS PGP + ++ + G G A S SS +SSPS
Sbjct: 52 SPGTPGPPPPPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPS 111
Query: 91 N 91
+
Sbjct: 112 S 112
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 36.6 bits (83), Expect = 0.14
Identities = 58/266 (21%), Positives = 98/266 (36%), Gaps = 6/266 (2%)
Query: 2 EELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMT 61
E S R R RL+ + S T P + + P+A SA P+ + + +
Sbjct: 747 EPRSPSHSMRTRSGRLSSSELSPLTPPSSVSSSLSISVSPLATSALNPTFTFPSHSLTQS 806
Query: 62 PATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVD 121
++ S +E SS S +P T R ++ D + E+ D
Sbjct: 807 GESAEKNQRPRKQTSAPAEPFSSSSPTPLFPWFTPGSQTERGRNKD---KAPEELSKDRD 863
Query: 122 VDSGIENMEVDENDR-REKRSLSDKEPSSGPEVSEEQALQLVCKIFRVS-WKDRDRDVIF 179
D +E + E DR REK + + + SE Q+ + + RVS K DV
Sbjct: 864 ADKSVEKDKSRERDREREKENKRESRKEKRKKGSEIQSSSALYPVGRVSKEKVVGEDVAT 923
Query: 180 LSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSP 239
SS + D+ L + + T+ + +L T+ + A S
Sbjct: 924 SSSAKKATGRKKSSSHDSGTDITSVTLGDTTAVKTKILIKKGRGNLEKTNLDLGPTAPSL 983
Query: 240 DRNLLLNTGSNPGTSPMFCSVASFGA 265
++ L S P +S + S +S G+
Sbjct: 984 EKEKTLCL-STPSSSTVKHSTSSIGS 1008
Score = 34.3 bits (77), Expect = 0.72
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 37 PPGPPIAASAPG-----PSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSN 91
PPGPP+ PG P+ + + A P GA+ + S SS SS SSS ++
Sbjct: 41 PPGPPVGGGGPGAPPSPPAVAAAAAAAGSSGAGVPGGAAAASAASSSSASSSSSSSSSAS 100
Query: 92 S 92
S
Sbjct: 101 S 101
Score = 31.2 bits (69), Expect = 6.1
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 37 PPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPS 90
PP PP A+A + S G V A S +S + S SS SS SS P+
Sbjct: 54 PPSPPAVAAAAAAAGSSGAGVPGGAAAASAASSSSASSSSSSS---SSASSGPA 104
>gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens]
Length = 1012
Score = 36.6 bits (83), Expect = 0.14
Identities = 33/146 (22%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 970 ILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDI 1029
+L ++ K F+ PE+ +F + + R L+ EN E+ +P ++
Sbjct: 829 LLEEEAVKEFIEPEIDE------SFKEDEEESKEDRKLQEENKERAEEQPSTSTEK---- 878
Query: 1030 YLQLDCARFAKAIADDQRSYSKELFE-EVISKMRKAGIKSTIAIEKFKLLA------EKV 1082
+ + I +D+ +SK LFE +V+S R++ + T+A + + +A EK+
Sbjct: 879 ------EKLIRFIGEDENVHSKPLFETDVLSSWRESAKQGTLAQKYLEAMAVIEHMQEKL 932
Query: 1083 EEIVAKNARAEIDYSDAPDEFRDPLM 1108
E+ + +AE + DA ++ L+
Sbjct: 933 LEVENRARQAEEKFEDAYEKLHHTLI 958
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 36.2 bits (82), Expect = 0.19
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Query: 56 NVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEK 115
++H + ++S +S + S SS SS SSS S+S + S S S S S + K
Sbjct: 145 SIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHK 204
Query: 116 SMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQAL-QLVCKIFRVSWKDRD 174
D + D + S K+P + EE+ + ++ K + K+
Sbjct: 205 EKPSKDSREHKSAFKEPSRDHNKSSKESSKKPKENKPLKEEKIVPKMAFKEPKPMSKEPK 264
Query: 175 RDVIFLSSLSAQFKQNPKE 193
D L+ S Q K+ P +
Sbjct: 265 PDSNLLTITSGQDKKAPSK 283
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 35.8 bits (81), Expect = 0.25
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 908 LLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDM 967
L E+ E L+ + + +NKE + L ++ Q+ ++ +D+ + R L TE
Sbjct: 692 LTKENQEPLRSLED-----ENKEAFRSLEKENQEPLKTLEEEDQSIVRP---LETENHKS 743
Query: 968 FHILTKQVQKPF--LRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ 1025
L +Q Q+ L E R ++ + + + PEK EP K LDQ
Sbjct: 744 LRSLEEQDQETLRTLEKETQQRRRSLGEQD----------QMTLRPPEKVDLEPLKSLDQ 793
Query: 1026 LTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAG 1065
L+ + F K++ ++ K L E++ ++ AG
Sbjct: 794 EIARPLENENQEFLKSLKEESVEAVKSLETEILESLKSAG 833
>gi|138175817 zinc finger protein 236 [Homo sapiens]
Length = 1845
Score = 35.8 bits (81), Expect = 0.25
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 18 AGGQTSQPTTPLTSPQRE-----NPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGV 72
A +SQP++ S + + P P + +P P Q L + V +
Sbjct: 342 ATSASSQPSSQAVSDVIQQLLELSEPAPVESGQSPQPGQQLSITVGIN---------QDI 392
Query: 73 AHRSQSSEGVSSLSSS--PSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENME 130
++ + G+SS+ ++ P++S ++ S +Q+ D+ VS E++ D + E
Sbjct: 393 LQQALENSGLSSIPAAAHPNDSCHAKT-SAPHAQNPDVSSVSNEQT-DPTDAEQEKEQES 450
Query: 131 VDENDRREKRSLSDKEPSSGPEVSEEQALQ 160
++ D++EK+ + K P + EE ++
Sbjct: 451 PEKLDKKEKKMIKKKSPFLPGSIREENGVR 480
>gi|40538736 RAN binding protein 10 [Homo sapiens]
Length = 620
Score = 35.4 bits (80), Expect = 0.32
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 9 IRRRRLARLAGGQTSQPTTPLT-SPQRENP-PGPPIAASAPGPSQSLGLNVHNMTPATSP 66
++ R+ + G S+ + + SP+ ++ PG P + GPS S ++HN T A SP
Sbjct: 332 LKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSS---HMHN-TGADSP 387
Query: 67 IGASGVAH----RSQSSEGVSSLSSSPSNSLETQS-QSLSRSQSMDIDGVSCEKSMSQVD 121
++GVA ++ S S SSS S+S + S S++ S+S D + S +
Sbjct: 388 SCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN 447
Query: 122 VDSGIENMEVD 132
++ ME++
Sbjct: 448 QETSDSEMEME 458
>gi|239742580 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 897
Score = 35.0 bits (79), Expect = 0.42
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 13/144 (9%)
Query: 25 PTTPLTSPQRENPPGPPIAASAPGPSQSL----GLNVHNMTPATSPIGASGVAHRSQSSE 80
P+T S ++ PPGP ++S P P+ S V ++ PAT + R S
Sbjct: 268 PSTAPVSGKKHRPPGPLFSSSDPLPATSYHSRDTAQVTSLIPATFTAASRDAGMRRTRSA 327
Query: 81 GVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDR---- 136
++ ++ P ++L S SL + +DG ++ + + EV N R
Sbjct: 328 PAAATAAPPPSTLNNTSGSLLNA----VDG-GPSHFLASATAAARAQRSEVRYNQRSQTS 382
Query: 137 REKRSLSDKEPSSGPEVSEEQALQ 160
R + L SS S + LQ
Sbjct: 383 RTRSCLKRNASSSSSSHSSTEGLQ 406
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,367,353
Number of Sequences: 37866
Number of extensions: 2032627
Number of successful extensions: 11400
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 11065
Number of HSP's gapped (non-prelim): 442
length of query: 1173
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1060
effective length of database: 13,968,660
effective search space: 14806779600
effective search space used: 14806779600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.