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Search of human proteins with 38202250
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38202250 sulfatase modifying factor 1 [Homo sapiens]
(374 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38202250 sulfatase modifying factor 1 [Homo sapiens] 802 0.0
gi|194248088 sulfatase modifying factor 2 isoform b precursor [H... 269 3e-72
gi|194248087 sulfatase modifying factor 2 isoform c precursor [H... 240 1e-63
gi|226437577 sulfatase modifying factor 2 isoform g [Homo sapiens] 221 1e-57
gi|194248090 sulfatase modifying factor 2 isoform e precursor [H... 218 5e-57
gi|194248084 sulfatase modifying factor 2 isoform d precursor [H... 87 3e-17
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 35 0.14
gi|157412280 ash2-like isoform a [Homo sapiens] 34 0.19
gi|109948292 hypothetical protein LOC57614 [Homo sapiens] 33 0.32
gi|239751502 PREDICTED: hypothetical protein XP_002347876 [Homo ... 33 0.54
gi|187761351 growth factor independent 1 [Homo sapiens] 32 0.71
gi|187761349 growth factor independent 1 [Homo sapiens] 32 0.71
gi|71037377 growth factor independent 1 [Homo sapiens] 32 0.71
gi|89257348 homeo box HB9 [Homo sapiens] 32 0.71
gi|239755398 PREDICTED: hypothetical protein [Homo sapiens] 32 0.93
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 32 1.2
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s... 32 1.2
gi|31791018 keratin associated protein 19-7 [Homo sapiens] 32 1.2
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 32 1.2
gi|226437579 NAC alpha domain containing [Homo sapiens] 31 1.6
gi|23397672 homeobox D4 [Homo sapiens] 31 1.6
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 31 1.6
gi|5032007 purine-rich element binding protein A [Homo sapiens] 31 1.6
gi|22538470 eomesodermin [Homo sapiens] 31 1.6
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 31 1.6
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 31 1.6
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 31 1.6
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 31 1.6
gi|120953251 neuron navigator 3 [Homo sapiens] 31 1.6
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 31 2.1
>gi|38202250 sulfatase modifying factor 1 [Homo sapiens]
Length = 374
Score = 802 bits (2072), Expect = 0.0
Identities = 374/374 (100%), Positives = 374/374 (100%)
Query: 1 MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGA 60
MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGA
Sbjct: 1 MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGA 60
Query: 61 HGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVT 120
HGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVT
Sbjct: 61 HGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVT 120
Query: 121 IDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWW 180
IDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWW
Sbjct: 121 IDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWW 180
Query: 181 LPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLH 240
LPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLH
Sbjct: 181 LPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLH 240
Query: 241 NRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWE 300
NRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWE
Sbjct: 241 NRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWE 300
Query: 301 WTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSASN 360
WTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSASN
Sbjct: 301 WTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSASN 360
Query: 361 LGFRCAADRLPTMD 374
LGFRCAADRLPTMD
Sbjct: 361 LGFRCAADRLPTMD 374
>gi|194248088 sulfatase modifying factor 2 isoform b precursor [Homo
sapiens]
Length = 320
Score = 269 bits (687), Expect = 3e-72
Identities = 134/283 (47%), Positives = 178/283 (62%), Gaps = 20/283 (7%)
Query: 89 SKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTE 148
+ MV + G F MGT+ P +DGE P R T+ F +D + V+N +F FV Y TE
Sbjct: 47 TSMVQLQGGRFLMGTNSPD-SRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTE 105
Query: 149 AEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLH 208
AE FG SFVFE +S++++ Q + + WWLPV+ A WR P GP S I R +HPVLH
Sbjct: 106 AEMFGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLH 165
Query: 209 VSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVT 268
VSWNDA AYC W GKRLPTE EWE++ RGGL +++PWGN QP + N+WQG+FP
Sbjct: 166 VSWNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQP---NRTNLWQGKFPKG 222
Query: 269 NTGEDGFQGTAPVDAFP-PNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDR 327
+ EDGF G +PV+AFP N YGLY+++GN WEWT+ + + + E+ + R
Sbjct: 223 DKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTA---SPYQAAEQDM----------R 269
Query: 328 VKKGGSYM--CHRSYCYRYRCAARSQNTPDSSASNLGFRCAAD 368
V +G S++ S +R R R NTPDS++ NLGFRCAAD
Sbjct: 270 VLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAAD 312
>gi|194248087 sulfatase modifying factor 2 isoform c precursor [Homo
sapiens]
Length = 305
Score = 240 bits (613), Expect = 1e-63
Identities = 128/283 (45%), Positives = 170/283 (60%), Gaps = 35/283 (12%)
Query: 89 SKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTE 148
+ MV + G F MGT+ P +DGE P R T+ F +D + V+N +F FV Y TE
Sbjct: 47 TSMVQLQGGRFLMGTNSPD-SRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTE 105
Query: 149 AEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLH 208
AE FG SFVFE +S++++ Q P+K P GP S I R +HPVLH
Sbjct: 106 AEMFGWSFVFEDFVSDELRNKATQ---------PMK------PAGPGSGIRERLEHPVLH 150
Query: 209 VSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVT 268
VSWNDA AYC W GKRLPTE EWE++ RGGL +++PWGN QP + N+WQG+FP
Sbjct: 151 VSWNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQP---NRTNLWQGKFPKG 207
Query: 269 NTGEDGFQGTAPVDAFP-PNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDR 327
+ EDGF G +PV+AFP N YGLY+++GN WEWT+ + + + E+ + R
Sbjct: 208 DKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTA---SPYQAAEQDM----------R 254
Query: 328 VKKGGSYM--CHRSYCYRYRCAARSQNTPDSSASNLGFRCAAD 368
V +G S++ S +R R R NTPDS++ NLGFRCAAD
Sbjct: 255 VLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAAD 297
>gi|226437577 sulfatase modifying factor 2 isoform g [Homo sapiens]
Length = 213
Score = 221 bits (562), Expect = 1e-57
Identities = 108/220 (49%), Positives = 143/220 (65%), Gaps = 19/220 (8%)
Query: 152 FGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSW 211
FG SFVFE +S++++ Q + + WWLPV+ A WR P GP S I R +HPVLHVSW
Sbjct: 2 FGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSW 61
Query: 212 NDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTG 271
NDA AYC W GKRLPTE EWE++ RGGL +++PWGN QP + N+WQG+FP +
Sbjct: 62 NDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQP---NRTNLWQGKFPKGDKA 118
Query: 272 EDGFQGTAPVDAFP-PNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKK 330
EDGF G +PV+AFP N YGLY+++GN WEWT+ + + + E+ + RV +
Sbjct: 119 EDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTA---SPYQAAEQDM----------RVLR 165
Query: 331 GGSYM--CHRSYCYRYRCAARSQNTPDSSASNLGFRCAAD 368
G S++ S +R R R NTPDS++ NLGFRCAAD
Sbjct: 166 GASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAAD 205
>gi|194248090 sulfatase modifying factor 2 isoform e precursor [Homo
sapiens]
Length = 358
Score = 218 bits (556), Expect = 5e-57
Identities = 103/203 (50%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 89 SKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTE 148
+ MV + G F MGT+ P +DGE P R T+ F +D + V+N +F FV Y TE
Sbjct: 47 TSMVQLQGGRFLMGTNSPD-SRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTE 105
Query: 149 AEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLH 208
AE FG SFVFE +S++++ Q + + WWLPV+ A WR P GP S I R +HPVLH
Sbjct: 106 AEMFGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLH 165
Query: 209 VSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVT 268
VSWNDA AYC W GKRLPTE EWE++ RGGL +++PWGN QP + N+WQG+FP
Sbjct: 166 VSWNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQP---NRTNLWQGKFPKG 222
Query: 269 NTGEDGFQGTAPVDAFP-PNGYG 290
+ EDGF G +PV+AFP N YG
Sbjct: 223 DKAEDGFHGVSPVNAFPAQNNYG 245
>gi|194248084 sulfatase modifying factor 2 isoform d precursor [Homo
sapiens]
Length = 236
Score = 86.7 bits (213), Expect = 3e-17
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 16/110 (14%)
Query: 262 QGEFPVTNTGEDGFQGTAPVDAFPP-NGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKG 320
+G+FP + EDGF G +PV+AFP N YGLY+++GN WEWT+ + + + E+ +
Sbjct: 132 KGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTA---SPYQAAEQDM---- 184
Query: 321 PPSGKDRVKKGGSYM--CHRSYCYRYRCAARSQNTPDSSASNLGFRCAAD 368
RV +G S++ S +R R R NTPDS++ NLGFRCAAD
Sbjct: 185 ------RVLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAAD 228
Score = 70.9 bits (172), Expect = 2e-12
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 89 SKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTE 148
+ MV + G F MGT+ P +DGE P R T+ F +D + V+N +F FV Y TE
Sbjct: 47 TSMVQLQGGRFLMGTNSPD-SRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTE 105
Query: 149 AEKFGDSFVFEGMLSEQVKTNIQQ 172
AE FG SFVFE +S++++ Q
Sbjct: 106 AEMFGWSFVFEDFVSDELRNKATQ 129
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 34.7 bits (78), Expect = 0.14
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 31 AAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHG 62
A G+ GTG+GA C CG P RPG G
Sbjct: 154 AGGAGGTGTGSGASCCPCCCCCGCPDRPGRRG 185
>gi|157412280 ash2-like isoform a [Homo sapiens]
Length = 628
Score = 34.3 bits (77), Expect = 0.19
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 30 GAAGSQEAGTGAGAGSLAGSCGCGTPQ-RPGAHGSSAAAHRYSREANAPGPVPGERQLAH 88
GA QEAG G G G++A + G + +P A G++A A P GE +
Sbjct: 5 GAGPGQEAGAGPGPGAVANATGAEEGEMKPVAAGAAAPPGEGISAAPTVEPSSGEAEGGE 64
Query: 89 SKMVPIPAGVFT 100
+ +V + G+ T
Sbjct: 65 ANLVDVSGGLET 76
>gi|109948292 hypothetical protein LOC57614 [Homo sapiens]
Length = 1216
Score = 33.5 bits (75), Expect = 0.32
Identities = 48/156 (30%), Positives = 58/156 (37%), Gaps = 35/156 (22%)
Query: 40 GAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVF 99
GAG+G GS G +PQ P A GSSA PG +PGE A V
Sbjct: 42 GAGSGLDPGSAGSLSPQDPVALGSSA----------RPG-LPGEAS---------AAAVA 81
Query: 100 TMGTDDPQIKQDGEAPARRVTIDA----FYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDS 155
GT GE PA R++IDA D Y ++ E + +G E + D
Sbjct: 82 LGGT--------GETPA-RLSIDAIAAQLLRDQYLLTALELHTELLESG--RELPRLRDY 130
Query: 156 FVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHP 191
F G Q T P V GA R P
Sbjct: 131 FSNPGNFERQSGTPPGMGAPGVPGAAGVGGAGGREP 166
>gi|239751502 PREDICTED: hypothetical protein XP_002347876 [Homo
sapiens]
Length = 74
Score = 32.7 bits (73), Expect = 0.54
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 31 AAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYS-----REANAPGPVPGERQ 85
A GS+E TGA AG A + G PG GSS A R S A A P
Sbjct: 6 ALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSL 65
Query: 86 LAHSKMVPI 94
L S VP+
Sbjct: 66 LVPSLQVPV 74
>gi|187761351 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.71
Identities = 32/85 (37%), Positives = 35/85 (41%), Gaps = 16/85 (18%)
Query: 6 LGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSC--GCGTPQRPG---- 59
LGL C PE G L G + A GAGAG+ GSC G G PG
Sbjct: 151 LGLFCEPAPEPGHPAALY---------GPKRAAGGAGAGA-PGSCSAGAGATAGPGLGLY 200
Query: 60 AHGSSAAAHRYSREANAPGPVPGER 84
SAAA Y R A G + ER
Sbjct: 201 GDFGSAAAGLYERPTAAAGLLYPER 225
>gi|187761349 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.71
Identities = 32/85 (37%), Positives = 35/85 (41%), Gaps = 16/85 (18%)
Query: 6 LGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSC--GCGTPQRPG---- 59
LGL C PE G L G + A GAGAG+ GSC G G PG
Sbjct: 151 LGLFCEPAPEPGHPAALY---------GPKRAAGGAGAGA-PGSCSAGAGATAGPGLGLY 200
Query: 60 AHGSSAAAHRYSREANAPGPVPGER 84
SAAA Y R A G + ER
Sbjct: 201 GDFGSAAAGLYERPTAAAGLLYPER 225
>gi|71037377 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.71
Identities = 32/85 (37%), Positives = 35/85 (41%), Gaps = 16/85 (18%)
Query: 6 LGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSC--GCGTPQRPG---- 59
LGL C PE G L G + A GAGAG+ GSC G G PG
Sbjct: 151 LGLFCEPAPEPGHPAALY---------GPKRAAGGAGAGA-PGSCSAGAGATAGPGLGLY 200
Query: 60 AHGSSAAAHRYSREANAPGPVPGER 84
SAAA Y R A G + ER
Sbjct: 201 GDFGSAAAGLYERPTAAAGLLYPER 225
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 32.3 bits (72), Expect = 0.71
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Query: 21 LLLLLSLLCGAAGSQEAGTGAGA-GSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGP 79
L L+ SL A+G+ G G GA G +GSC + + P A A P
Sbjct: 28 LALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPAD---------RLRAESP 78
Query: 80 VPGERQLAHSKMVPIP 95
P AH ++P P
Sbjct: 79 SPPRLLAAHCALLPKP 94
>gi|239755398 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 32.0 bits (71), Expect = 0.93
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Query: 30 GAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGP-----VPGER 84
GA G + G A SC G P R GA G AAA + A +P P P
Sbjct: 53 GARGGGDPGRPGARAFSAASCQAGRPWRCGAAGGRAAAALW--RAGSPNPENPRYPPPSH 110
Query: 85 QLAHSKM 91
Q H K+
Sbjct: 111 QHQHEKL 117
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 12 RCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCG-CGTPQRPGAHGSSAAA-HR 69
R L L L L L+ G + GA AG+ G G G P G
Sbjct: 1256 RLSRLSLALPPLTLTPFPGPGPRRPPWEGADAGAAGGEAGGAGAPGPAEEDGEDEDEDEE 1315
Query: 70 YSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTD 104
EA APG G R ++ P+P V + D
Sbjct: 1316 EDEEAAAPGAAAGPRGPGRARAAPVPVVVSSADAD 1350
>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
sapiens]
Length = 1690
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 14 PELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGC----GTPQRPGAHG 62
P L L+L+ L L+ AAG + G G +GSC C G RPG G
Sbjct: 3 PGLWLLLVTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIG 55
>gi|31791018 keratin associated protein 19-7 [Homo sapiens]
Length = 63
Score = 31.6 bits (70), Expect = 1.2
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 32 AGSQEAGTGAGAGSLAG-----SCGCGTPQRPGAHGSSAAAHRYS 71
+GS G G G G G SCGCG+ +R G +G +RYS
Sbjct: 4 SGSYYGGLGYGCGGFGGLGYGYSCGCGSFRRLG-YGCGYGGYRYS 47
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 31.6 bits (70), Expect = 1.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 29 CGAAGSQEAGTGAGAGSLAGSC-GCGT 54
CG GS G G+G G + SC GCG+
Sbjct: 28 CGGCGSGRGGCGSGCGGCSSSCGGCGS 54
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 45 SLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTD 104
+L GC PG + A + EA P P P E+ A VP PA + + D
Sbjct: 947 TLQAEAGCA----PGTEPVATMAQQEVGEALGPRPAPEEKNAA-LPTVPEPAALDQVQQD 1001
Query: 105 DPQIKQDGEAP 115
DPQ + P
Sbjct: 1002 DPQPAAEAGTP 1012
>gi|23397672 homeobox D4 [Homo sapiens]
Length = 255
Score = 31.2 bits (69), Expect = 1.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 38 GTGAGAGSLAGSCGCGT-PQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPA 96
G+G G GS + G G P PG H ++ + A P P+PG R + S P+
Sbjct: 64 GSGPGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPPAPPPAPLPGARAYSQSDPKQPPS 123
Query: 97 G 97
G
Sbjct: 124 G 124
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 36 EAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYS----REANAPGPVPGERQLAHSKM 91
EAG G+ G+P PGA+G AA R P +PGE+ A +
Sbjct: 451 EAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERG 510
Query: 92 VPIPAG 97
P PAG
Sbjct: 511 APGPAG 516
>gi|5032007 purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 31.2 bits (69), Expect = 1.6
Identities = 19/63 (30%), Positives = 25/63 (39%)
Query: 32 AGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKM 91
+GS++ G G+G G G G+ G G APG + E Q SK
Sbjct: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKR 65
Query: 92 VPI 94
V I
Sbjct: 66 VDI 68
>gi|22538470 eomesodermin [Homo sapiens]
Length = 686
Score = 31.2 bits (69), Expect = 1.6
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 33 GSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPG 82
G + G GAGAGS AG G G ++YS+ A GP PG
Sbjct: 204 GRAQFGPGAGAGSGAGGSSGG--------GGGPGTYQYSQGAPLYGPYPG 245
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 45 SLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTD 104
+L GC PG + A + EA P P P E+ A VP PA + + D
Sbjct: 907 TLQAEAGCA----PGTEPVATMAQQEVGEALGPRPAPEEKNAA-LPTVPEPAALDQVQQD 961
Query: 105 DPQIKQDGEAP 115
DPQ + P
Sbjct: 962 DPQPAAEAGTP 972
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 45 SLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTD 104
+L GC PG + A + EA P P P E+ A VP PA + + D
Sbjct: 907 TLQAEAGCA----PGTEPVATMAQQEVGEALGPRPAPEEKNAA-LPTVPEPAALDQVQQD 961
Query: 105 DPQIKQDGEAP 115
DPQ + P
Sbjct: 962 DPQPAAEAGTP 972
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 45 SLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTD 104
+L GC PG + A + EA P P P E+ A VP PA + + D
Sbjct: 947 TLQAEAGCA----PGTEPVATMAQQEVGEALGPRPAPEEKNAA-LPTVPEPAALDQVQQD 1001
Query: 105 DPQIKQDGEAP 115
DPQ + P
Sbjct: 1002 DPQPAAEAGTP 1012
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 45 SLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTD 104
+L GC PG + A + EA P P P E+ A VP PA + + D
Sbjct: 907 TLQAEAGCA----PGTEPVATMAQQEVGEALGPRPAPEEKNAA-LPTVPEPAALDQVQQD 961
Query: 105 DPQIKQDGEAP 115
DPQ + P
Sbjct: 962 DPQPAAEAGTP 972
>gi|120953251 neuron navigator 3 [Homo sapiens]
Length = 2363
Score = 31.2 bits (69), Expect = 1.6
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 43 AGSLAGSCGCGTPQRPGAHGSSAAAH-----RYSREANAPGPVPGERQLAHSKMVPIPAG 97
AG + G P+ P G A+ + R +A G P RQ A + + P
Sbjct: 957 AGGKWKTVSSGLPEDPEKAGQKASLSVSQTGSWRRGMSAQGGAPS-RQKAGTSALKTPGK 1015
Query: 98 VFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFG 153
TDD + + G+AP + ++ DA + S E +K + G T FG
Sbjct: 1016 -----TDDAKASEKGKAPLKGSSLQRSPSDAGKSSGDEGKKPPSGIGRSTATSSFG 1066
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo
sapiens]
Length = 1669
Score = 30.8 bits (68), Expect = 2.1
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 14 PELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGC-GTPQRPGAHG 62
P L + LLLL +LL S+ A G AGS G C C G + G G
Sbjct: 3 PRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERG 52
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,817,203
Number of Sequences: 37866
Number of extensions: 979762
Number of successful extensions: 4041
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 3852
Number of HSP's gapped (non-prelim): 250
length of query: 374
length of database: 18,247,518
effective HSP length: 104
effective length of query: 270
effective length of database: 14,309,454
effective search space: 3863552580
effective search space used: 3863552580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.