Guide to the Human Genome
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Name: SUMF2 Sequence: fasta or formatted (213aa) NCBI GI: 226437577
Description:

sulfatase modifying factor 2 isoform g

Referenced in:

Phosphatases and Sulfatases
Additional Protein Modifications

Other entries for this name:
alt prot [236aa] sulfatase modifying factor 2 isoform d precursor
alt prot [305aa] sulfatase modifying factor 2 isoform c precursor
alt prot [320aa] sulfatase modifying factor 2 isoform b precursor
alt prot [358aa] sulfatase modifying factor 2 isoform e precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         22           2
 C cysteine            0.9          2           1
 D aspartate           5.6         12           1
 E glutamate           6.1         13           3
 F phenylalanine       5.2         11           1
 G glycine             9.9         21           2
 H histidine           1.9          4           1
 I isoleucine          0.9          2           1
 K lysine              3.8          8           1
 L leucine             6.6         14           2
 M methionine          1.9          4           1
 N asparagine          5.6         12           2
 P proline             7.0         15           2
 Q glutamine           3.8          8           1
 R arginine            7.5         16           1
 S serine              5.2         11           1
 T threonine           3.8          8           2
 V valine              5.6         12           1
 W tryptophan          6.1         13           2
 Y tyrosine            2.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sulfatase modifying factor 2 isoform g 
SUMF2                 1.000   sulfatase modifying factor 2 isoform b precursor [H...
SUMF2                 0.898   sulfatase modifying factor 2 isoform c precursor [H...
SUMF2                 0.646   sulfatase modifying factor 2 isoform e precursor [H...
SUMF2                 0.451   sulfatase modifying factor 2 isoform d precursor [H...
SUMF1                 0.444   sulfatase modifying factor 1 
LOC729722             0.011   PREDICTED: ankyrin repeat domain-containing protein...
LOC729722             0.011   PREDICTED: ankyrin repeat domain-containing protein...
LOC100292217          0.009   PREDICTED: hypothetical protein 
LOC100288033          0.009   PREDICTED: hypothetical protein 
LOC100288033          0.009   PREDICTED: hypothetical protein XP_002343859 
NUDCD2                0.007   NudC domain containing 2 
EYS                   0.005   eyes shut homolog isoform 2 
EYS                   0.005   eyes shut homolog isoform 1 
EYS                   0.005   eyes shut homolog isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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