Guide to the Human Genome
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Name: GFI1 Sequence: fasta or formatted (422aa) NCBI GI: 71037377
Description:

growth factor independent 1

Referenced in:

Hematopoiesis and Erythrocytes
Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [422aa] growth factor independent 1
alt mRNA [422aa] growth factor independent 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         39           3
 C cysteine            4.5         19           1
 D aspartate           3.6         15           1
 E glutamate           5.5         23           1
 F phenylalanine       4.3         18           1
 G glycine            10.9         46           3
 H histidine           5.2         22           1
 I isoleucine          1.2          5           1
 K lysine              6.9         29           2
 L leucine             8.1         34           3
 M methionine          0.9          4           1
 N asparagine          0.7          3           1
 P proline             8.3         35           2
 Q glutamine           2.8         12           1
 R arginine            6.6         28           2
 S serine             11.4         48           2
 T threonine           3.8         16           1
 V valine              3.1         13           1
 W tryptophan          0.5          2           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth factor independent 1 
GFI1                  1.000   growth factor independent 1 
GFI1                  1.000   growth factor independent 1 
GFI1B                 0.362   growth factor independent 1B transcription represso...
GFI1B                 0.242   growth factor independent 1B transcription represso...
ZNF91                 0.182   zinc finger protein 91 
ZNF85                 0.180   zinc finger protein 85 
ZNF493                0.180   zinc finger protein 493 isoform 1 
ZNF493                0.180   zinc finger protein 493 isoform 3 
ZNF714                0.180   zinc finger protein 714 
ZNF726                0.179   PREDICTED: zinc finger protein 726 
ZNF66                 0.179   PREDICTED: zinc finger protein 66 
ZNF726                0.179   PREDICTED: zinc finger protein 726 
ZNF66                 0.179   PREDICTED: zinc finger protein 66 
ZNF726                0.179   PREDICTED: zinc finger protein 726 
ZNF66                 0.179   PREDICTED: zinc finger protein 66 
ZNF836                0.179   zinc finger protein 836 
LOC646864             0.178   PREDICTED: similar to hCG36734 
LOC646864             0.178   PREDICTED: similar to hCG36734 
LOC646864             0.178   PREDICTED: similar to hCG36734 
ZNF596                0.178   zinc finger protein 596 
ZNF596                0.178   zinc finger protein 596 
ZNF596                0.178   zinc finger protein 596 
ZNF214                0.178   zinc finger protein 214 
ZNF626                0.177   zinc finger protein 626 isoform 1 
ZNF227                0.177   zinc finger protein 227 
ZNF205                0.177   zinc finger protein 205 
ZNF205                0.177   zinc finger protein 205 
ZNF431                0.176   zinc finger protein 431 
ZNF568                0.176   zinc finger protein 568 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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