Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 38146113
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
(375 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 730 0.0
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 713 0.0
gi|38146109 arginine/serine-rich coiled-coil 2 isoform c [Homo s... 392 e-109
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 112 7e-25
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 111 9e-25
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 107 2e-23
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 106 3e-23
gi|52426743 cisplatin resistance-associated overexpressed protei... 103 3e-22
gi|19923485 cisplatin resistance-associated overexpressed protei... 103 3e-22
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 102 6e-22
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 102 6e-22
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 100 2e-21
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 100 3e-21
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 99 8e-21
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 98 1e-20
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 97 2e-20
gi|116812577 LUC7-like 2 [Homo sapiens] 96 7e-20
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 95 9e-20
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 93 3e-19
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 93 4e-19
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 93 4e-19
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 92 6e-19
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 92 6e-19
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 92 8e-19
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 92 8e-19
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 91 2e-18
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 90 3e-18
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 90 4e-18
gi|41393554 LUC7-like isoform b [Homo sapiens] 89 8e-18
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 88 1e-17
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 730 bits (1884), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Query: 1 MIRTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKS 60
MIRTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKS
Sbjct: 1 MIRTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKS 60
Query: 61 SRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSR 120
SRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSR
Sbjct: 61 SRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSR 120
Query: 121 SRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEAL 180
SRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEAL
Sbjct: 121 SRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEAL 180
Query: 181 ARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQM 240
ARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQM
Sbjct: 181 ARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQM 240
Query: 241 AALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNF 300
AALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNF
Sbjct: 241 AALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNF 300
Query: 301 GNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRG 360
GNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRG
Sbjct: 301 GNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRG 360
Query: 361 MGLGFTSSMRGMDAV 375
MGLGFTSSMRGMDAV
Sbjct: 361 MGLGFTSSMRGMDAV 375
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 713 bits (1840), Expect = 0.0
Identities = 366/367 (99%), Positives = 367/367 (100%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
K+GRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR
Sbjct: 68 KEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 127
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR
Sbjct: 128 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 187
Query: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK 188
HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK
Sbjct: 188 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK 247
Query: 189 KLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKAL 248
KLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKAL
Sbjct: 248 KLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKAL 307
Query: 249 AETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVK 308
AETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVK
Sbjct: 308 AETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVK 367
Query: 309 FRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSS 368
FRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSS
Sbjct: 368 FRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSS 427
Query: 369 MRGMDAV 375
MRGMDAV
Sbjct: 428 MRGMDAV 434
>gi|38146109 arginine/serine-rich coiled-coil 2 isoform c [Homo
sapiens]
Length = 202
Score = 392 bits (1007), Expect = e-109
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 174 MDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQ 233
MDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQ
Sbjct: 1 MDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQ 60
Query: 234 IAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAE 293
IAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAE
Sbjct: 61 IAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAE 120
Query: 294 IWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARS 353
IWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARS
Sbjct: 121 IWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARS 180
Query: 354 QTHTQRGMGLGFTSSMRGMDAV 375
QTHTQRGMGLGFTSSMRGMDAV
Sbjct: 181 QTHTQRGMGLGFTSSMRGMDAV 202
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 112 bits (279), Expect = 7e-25
Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 16/172 (9%)
Query: 50 EDRHKRKERKSSRGRSHSRSRSRERRH-RSRSRERKKSRSRSRERKKSRSRSRERKKSRS 108
E RH RK R +SRGRS SRSRSR RS+ + ++SRSR R+R++ RSRSR++++SRS
Sbjct: 4 ESRHYRK-RSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRS 62
Query: 109 RSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKR---------IEKPRRFSRSLS 159
R R+R RR RSR R RSR R R+RSR R RSRSR R +R +K SRS
Sbjct: 63 RDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKE 122
Query: 160 RT----PSPPPFRGRNTAMDAQEALARRLERAKKLQEQRE-KEMVEKQKQQE 206
+T S + ++ D +E A ++ K +E R+ KE VEK ++++
Sbjct: 123 KTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQ 174
Score = 96.3 bits (238), Expect = 4e-20
Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 18/189 (9%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
+R S+ +S + +S +DK S +G +R + S DR +R+ER SR + SRSR
Sbjct: 10 KRSASRGRSGSRSRSRSPSDKR--SKRGDDRRSRSR---DRDRRRERSRSRDKRRSRSRD 64
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 131
R+R RSRSRE R RSRER+ RSRSR+R++SRSRSR R+ R S + +R+
Sbjct: 65 RKRLRRSRSRE----RDRSRERR--RSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRS 118
Query: 132 RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQ 191
RS+ +T ++K+ +K + G +E + +R ER +K +
Sbjct: 119 RSKEKTDGGESSKEKKKDKD-------DKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWR 171
Query: 192 EQREKEMVE 200
E++ K+ +E
Sbjct: 172 EEQRKKAME 180
Score = 82.4 bits (202), Expect = 6e-16
Identities = 55/136 (40%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Query: 72 RERRH-RSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
RE RH R RS R +S SRSR R S RS+ RSRSR+R RR R RSRSR + R R
Sbjct: 3 RESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRR-RERSRSRDKRRSR 61
Query: 131 TRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKL 190
+R R R R RSR R++ + RR SRS R S RGR + + +++ E +
Sbjct: 62 SRDRKRLR-RSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS 120
Query: 191 QEQREKEMVEKQKQQE 206
+E+ + K+K+++
Sbjct: 121 KEKTDGGESSKEKKKD 136
Score = 75.1 bits (183), Expect = 1e-13
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 KQGRRHESKDKSSKKHK-SEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+ G R S+ S K+ K ++ + D+ RER S + R R ++ R RS
Sbjct: 17 RSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR-SRDRKRLRRSRSRE 75
Query: 68 RSRSRERRHRSRSRERKKSRSRSRERK-------------KSRSRSRERKKSRSRSRERK 114
R RSRERR RSRSR+R++SRSRSR R+ ++RSRS+E+ S+E+K
Sbjct: 76 RDRSRERR-RSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKK 134
Query: 115 RRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSR 156
+ + + + +++ R RK+R+EK R R
Sbjct: 135 KDKDDKEDEKEKDAGNF-DQNKLEEEMRKRKERVEKWREEQR 175
Score = 52.8 bits (125), Expect = 5e-07
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR------- 64
RR S+ + ++ +S + S + R+R R +R+ R SRGR
Sbjct: 48 RRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSP 107
Query: 65 ------SHSRSRSRERRHRSR-SRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRI 117
+ +RSRS+E+ S+E+KK + + K+ + + ++ K R+RK R+
Sbjct: 108 GNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERV 167
Query: 118 RSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRR 153
+ R R + + KK IE+ ++
Sbjct: 168 ---------EKWREEQRKKAMENIGELKKEIEEMKQ 194
Score = 40.4 bits (93), Expect = 0.003
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKS---SRGRSH 66
+GRR S +K K+E + + +D G ++ +D+ KE+ + + +
Sbjct: 98 RGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLE 157
Query: 67 SRSRSR-ERRHRSRSRERKKSRSRSRERKKSRSRSRERKK 105
R R ER + R +RKK+ E KK ++ KK
Sbjct: 158 EEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 111 bits (278), Expect = 9e-25
Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
+ E + + +K + E ++E ++ RER E +R K KER+ R R R R++
Sbjct: 297 KKEKERQEIEKERRERERERERERER-REREREREREREREKEKERERERERDRDRDRTK 355
Query: 73 ER-RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR-RIRSRSRSRSRHRHR 130
ER R R R R+R + R RS +R K RSRSRE+ + R R RER+R R R R R R R R R
Sbjct: 356 ERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERER 415
Query: 131 TRSRSRTRSRSRDRKKRIEKP-------RRFSRSLSRTPSPPPFRGRNTAMDAQEALARR 183
R R R R R +D+K+ E+ R+ R L + R +N + + R
Sbjct: 416 EREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEI-RERKKTRE 474
Query: 184 LERAKKLQEQREKEMVEKQKQ 204
E+ + +E+R +EM ++ K+
Sbjct: 475 YEKEAEREEERRREMAKEAKR 495
Score = 99.4 bits (246), Expect = 5e-21
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 41 ERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRS 100
++L + +++ +++ K R R R R RERR R R RER++ R + +ER++ R R
Sbjct: 289 KKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERD 348
Query: 101 RERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSR 160
R+R +++ R R+R R R R R R R R + RSR+R +SRDR++ E+ R R R
Sbjct: 349 RDRDRTKERDRDRDRE-RDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERER 407
Query: 161 TPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAA 209
R R + + ++ +R + ++ E+ +E++ +++ AA
Sbjct: 408 EREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAA 456
Score = 97.1 bits (240), Expect = 2e-20
Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 27 EEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKS 86
E+ N E DK D HK+ E + + + +ERR R R RER++
Sbjct: 262 EDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERE 321
Query: 87 RSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKK 146
R R RER++ R R RE++K R R RER R R R++ R R R R R R R R RS DR K
Sbjct: 322 R-REREREREREREREKEKERERERERDRD-RDRTKERDRDRDRERDRDRDRERSSDRNK 379
Query: 147 RIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
+ R SR R R R + + R ER ++ + +RE+E +K+ ++E
Sbjct: 380 DRSRSREKSRDRERERE----REREREREREREREREREREREREREREREKDKKRDREE 435
Score = 97.1 bits (240), Expect = 2e-20
Identities = 70/197 (35%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDK-GRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R SK + + K EE KE + +ER E +R+ER+ R R R +
Sbjct: 279 REISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKE 338
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 131
+ER R R R+R + R++ R+R + R R R+R + RS R K R RSR +SR R R R
Sbjct: 339 KERE-RERERDRDRDRTKERDRDRDRERDRDRDRERSSDR-NKDRSRSREKSRDRERERE 396
Query: 132 RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARR-LERAKKL 190
R R R R R R+R++ E+ R R R + R+ D ++A RR LER KL
Sbjct: 397 REREREREREREREREREREREREREREREKD----KKRDREEDEEDAYERRKLER--KL 450
Query: 191 QEQREKEMVEKQKQQEI 207
+E +E E+ K EI
Sbjct: 451 RE-KEAAYQERLKNWEI 466
Score = 75.5 bits (184), Expect = 7e-14
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 13 RHESKDKSSKKHKSEEHN-DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R +D+ + +S + N D+ S +K R+R E +R + +ER+ R R R R
Sbjct: 361 RDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERE 420
Query: 72 RER-RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
RER R + + R+R++ + ER+K + RE K++ + R + IR R ++R +
Sbjct: 421 REREREKDKKRDREEDEEDAYERRKLERKLRE-KEAAYQERLKNWEIRERKKTREYEKEA 479
Query: 131 TRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRL-ERAKK 189
R R R +++ K+ E + P +RG AL +RL +R K+
Sbjct: 480 EREEERRREMAKEAKRLKEFLEDYD---DDRDDPKYYRG--------SALQKRLRDREKE 528
Query: 190 LQ-----EQREKEMVEKQKQQEIA 208
++ +REKE +E+ +Q+ +A
Sbjct: 529 MEADERDRKREKEELEEIRQRLLA 552
Score = 63.2 bits (152), Expect = 4e-10
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 33/221 (14%)
Query: 16 SKDKSSKKHKS---EEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
+KD+S + KS E ++E ++ RER E +R + +ER+ + + R
Sbjct: 378 NKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDE 437
Query: 73 ERRHRSRSRERKKSRSRS-----------RERKKSRSRSRERKKSRSRSRERKRRIR--- 118
E + R ERK + RERKK+R +E ++ R RE + +
Sbjct: 438 EDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLK 497
Query: 119 ------SRSRSRSRHRHRTRSRSRTRSR-------SRDRKKRIEKPRRFSRSLSRTPSPP 165
R ++ + + R R R RDRK+ E+ + L P
Sbjct: 498 EFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPD 557
Query: 166 PFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
P QEA RR + K+ E E+E EKQ+++E
Sbjct: 558 P--DAELQRMEQEAERRRQPQIKQEPESEEEE-EEKQEKEE 595
Score = 33.9 bits (76), Expect = 0.24
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 11/165 (6%)
Query: 19 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHK-RKERKSSRGRS-HSRSRSRERRH 76
K +++++ E ++E + +E E ED R + K RG + R R RE+
Sbjct: 470 KKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEM 529
Query: 77 RSRSRERKKSRSRSRE-RKKSRSRSRE------RKKSRSRSRERKRRIRSRSRSRSRHRH 129
+ R+RK+ + E R++ + ++ + R R+ +I+ S
Sbjct: 530 EADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEE 589
Query: 130 RTRSRSRTRSRSRDRKKRIEKP--RRFSRSLSRTPSPPPFRGRNT 172
+ + + ++ +KP + R +S PS G T
Sbjct: 590 KQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGNAT 634
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 107 bits (266), Expect = 2e-23
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 22 KKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER------- 74
+K +++ + E D+ RER N +E E+RH++++R R R R + RER
Sbjct: 7 RKRETDRGKETERERDRQRERENQTER-ENRHRQRDRHRERDRQTDREKERERQKERDRQ 65
Query: 75 RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRI-RSRSRSRSRHRHRTRS 133
R R R ER+ R R R+R++ R R +R++ + R RERKR R+R R+R R R +
Sbjct: 66 RQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQ 125
Query: 134 RSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQ 193
R R R R+R+++ E+ R+ R R R T + Q A R ER K+ +++
Sbjct: 126 TERERDRERERQRQRERERQRQRE----------RKRETDRERQR-WAEREERKKERKKE 174
Query: 194 REKEMVEKQKQQE 206
R+KE EK+K+++
Sbjct: 175 RKKERKEKKKEEK 187
Score = 89.7 bits (221), Expect = 4e-18
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 9 KQGRRHESKDKSSKKHKSEEHN-DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+Q RH +D+ + + K E +++ + RE +E +R +++ERK R
Sbjct: 38 RQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERD 97
Query: 68 RSRSRER-RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR-RIRSRSRSRS 125
+ R RER R R+RER + R R+++ R R RER++ R R RER+R R R R R
Sbjct: 98 KDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRE 157
Query: 126 RHR-----HRTRSRSRTRSRSRDRKKRIEKPR 152
R R R + R + R + R KK+ EK R
Sbjct: 158 RQRWAEREERKKERKKERKKERKEKKKEEKRR 189
Score = 64.3 bits (155), Expect = 2e-10
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 89 RSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRI 148
R RERK+ R +E ++ R R RER+ + +R R R RHR R R R + R+R+K
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKER 62
Query: 149 EKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQ 205
++ R+ R R + Q R+ ER ++ +R+K+ ++K++
Sbjct: 63 DRQRQRERETER------------ETERQRERQRQRERKRQTDRERDKDRDRERKRE 107
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 106 bits (265), Expect = 3e-23
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R E++ ++ +K +++ D++ +++ RE+ +R + ER++ R + R R
Sbjct: 214 RERETETETERKRQTDRERDRQRKTEREREKQ------AERERASERETERDKERERERD 267
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 131
R+R R +ER++ R R+R+ R R ERK+ R R RER+R R+R R R R R
Sbjct: 268 RDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERE---RNRKRERERERE 324
Query: 132 RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQ 191
R R R R RDR+K E+ R+ + R R R T + + R ER ++
Sbjct: 325 RERERQRETERDREKERERKRKRQTEMDRE------RNRQTGREGRRQAERERERERERD 378
Query: 192 EQREKEMVEKQKQQE 206
Q +E E+++ ++
Sbjct: 379 RQSAREREERERDRD 393
Score = 101 bits (251), Expect = 1e-21
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
+Q R+ K++ +K++ E + + + SE G +R + +E ++ R
Sbjct: 169 RQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQT 228
Query: 69 SRSRERRHRS-RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRH 127
R R+R+ ++ R RE++ R R+ ER+ R + RER++ R R R+R+++ R R R R
Sbjct: 229 DRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQ 288
Query: 128 RHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERA 187
R R R R R R R++ E+ R R R R R T D ++ R+ +R
Sbjct: 289 RRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQ 348
Query: 188 KKLQEQREKEMVEKQKQQ 205
++ +R ++ + ++Q
Sbjct: 349 TEMDRERNRQTGREGRRQ 366
Score = 100 bits (249), Expect = 2e-21
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRH---------KRKERK 59
++ R+ +++ + K+ + E +++E DK RER + DR ++++R+
Sbjct: 231 ERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRR 290
Query: 60 SSRGRSHSRSRSRER-RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRI- 117
+ R R R R R+R R R R R RK+ R R RER++ R R ER + + R R+RKR+
Sbjct: 291 TERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTE 350
Query: 118 --RSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMD 175
R R+R R R R R R R RDR+ E+ R R R R D
Sbjct: 351 MDRERNRQTGREGRRQAERERERERERDRQSAREREER-ERDRDRDRQKERERQTEKDRD 409
Query: 176 AQEALARRLERAKKLQEQREKEMVEKQKQQE 206
Q ++ ER K + +R +E ++++Q+
Sbjct: 410 GQRETEKQREREKDRESERGRERGREREKQK 440
Score = 96.3 bits (238), Expect = 4e-20
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENG--EDRHKRKERKSSRGRSHSRSR 70
RH +D+ ++ + E ++E +D+ R+R E ++R + ER+ RGR
Sbjct: 87 RHRKRDRHRERQRDRE-KERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDG 145
Query: 71 SRER---RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRH 127
RER R + RER+ R R R+ +++R + RER+K+R RER+R+ +++ RH
Sbjct: 146 QRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRH 205
Query: 128 RHRTRSRSRTR--SRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLE 185
R R R R R +RK++ ++ R R R R + + A R E
Sbjct: 206 SERGRERERERETETETERKRQTDRERDRQRKTERE--------REKQAERERASERETE 257
Query: 186 RAKKLQEQREKEMVEKQKQQE 206
R K+ + +R+++ ++Q+E
Sbjct: 258 RDKERERERDRDRDRDRRQKE 278
Score = 94.0 bits (232), Expect = 2e-19
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++GR ++ + ++ + + ++E +D+ R+R ++R + K R+ R R R
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERE--R 193
Query: 69 SRSRERRHRSRSRERKKSRSRSRE--------RKKSRSRSRERKKSRSRSRERKR-RIRS 119
R +E + R ER + R R RE R+ R R R+RK R R ++ +R R
Sbjct: 194 QREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASE 253
Query: 120 RSRSRSRHRHRTRSRSRTRSR---------SRDRKKRIEKPRRFSRSLSRTPSPPPFRGR 170
R R + R R R R R R R R R++R E+ R R R R R
Sbjct: 254 RETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERER 313
Query: 171 NTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQ 205
N + + R ER ++ + REKE K+K+Q
Sbjct: 314 NRKRERERERERERERQRETERDREKERERKRKRQ 348
Score = 93.2 bits (230), Expect = 3e-19
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++ R + +++ + + + KE R+R +E + +++ER+ R R R
Sbjct: 254 RETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERER 313
Query: 69 SRSRER---RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERK-RRIRSRSRSR 124
+R RER R R R R+R+ R R +ER++ R R E + R+R R+ RR R R R
Sbjct: 314 NRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERER 373
Query: 125 SRHRHRTRSRSR-TRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARR 183
R R R +R R R R RDR ++ E+ R+ + R R +++ R
Sbjct: 374 ERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERG 433
Query: 184 LERAKKLQEQREKE 197
ER K+ +R++E
Sbjct: 434 REREKQKGRERDRE 447
Score = 92.8 bits (229), Expect = 4e-19
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
+Q R ++K + +++ ++ D+ R+R E DR K +ER++ R R R
Sbjct: 58 RQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQR 117
Query: 69 SRSRER---RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRS 125
+ R R R R RE ++ R R + ++ R R R+ +K R R +R+R+ R R+R
Sbjct: 118 EKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQ-RQTERNRQ 176
Query: 126 RHRHRTRSRSRTRSRSRDRKKRIEKPRRFS---RSLSRTPSPPPFRGRNTAMDAQEALAR 182
+ R R ++R R R R R+K + R S R R R D + R
Sbjct: 177 KEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQR 236
Query: 183 RLERAKKLQEQREK---EMVEKQKQQE 206
+ ER ++ Q +RE+ E+ K++E
Sbjct: 237 KTEREREKQAERERASERETERDKERE 263
Score = 92.4 bits (228), Expect = 6e-19
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 24 HKSEEHNDKEHSSDKGRERLNSSENGE-DRHKRKERKSSRGRSHSRSRSRER-RHRSRSR 81
HK + +D+E + K RER E + +++ER+ + R R R RER R R + R
Sbjct: 46 HKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKER 105
Query: 82 ERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRS 141
ER+ R R R+R+K R+R +ER++ R ER R R R R R R + R R
Sbjct: 106 ERQTDRERDRQREKERNRQKERERETEREGERGRD-RQTDGQRERERQRDAEKERERQTD 164
Query: 142 RDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEK 201
R+R+++ E+ R+ R + R R + + R ER ++ + +RE E +
Sbjct: 165 RERQRQTERNRQKEREREKNRQERRERERQREKE-NKTEDRHSERGRERERERETETETE 223
Query: 202 QKQQ 205
+K+Q
Sbjct: 224 RKRQ 227
Score = 91.7 bits (226), Expect = 1e-18
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 16/206 (7%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 74
+ D+ + K E ++ +++ +R +DRH++++R R R + R R+
Sbjct: 50 DGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQT 109
Query: 75 -RHRSRSRERKKSRSRSRERKKSR--SRSRERKKSRSRSRERKR---RIRSRSRSRSRHR 128
R R R RE++++R + RER+ R R R+R+ R RER+R + R R R R R
Sbjct: 110 DRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQR 169
Query: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGR--------NTAMDAQEAL 180
R+R + R R ++R++R E+ R+ + ++T RGR T + +
Sbjct: 170 QTERNRQKEREREKNRQERRERERQREKE-NKTEDRHSERGRERERERETETETERKRQT 228
Query: 181 ARRLERAKKLQEQREKEMVEKQKQQE 206
R +R +K + +REK+ E+++ E
Sbjct: 229 DRERDRQRKTEREREKQ-AERERASE 253
Score = 90.1 bits (222), Expect = 3e-18
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R + + + + + E + E ++GR+R + +R + E++ R R R
Sbjct: 111 RERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQ 170
Query: 72 RERRHRSRSRERKKSRSRSRERKKSR---SRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
ER +R + RER+K+R RER++ R +++ +R R R RER+R + + R R
Sbjct: 171 TER-NRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETET---ERKR 226
Query: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMD-AQEALARRLERA 187
R R R R R+R+K+ E+ R R R R R+ D Q+ R+ +R
Sbjct: 227 QTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRK 286
Query: 188 KKLQEQREKEMVEKQKQQ 205
++ + +R++E K+++Q
Sbjct: 287 RQRRTERDRETERKRERQ 304
Score = 86.3 bits (212), Expect = 4e-17
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
K+ R +D+ + + E + + ER +E +R + +ER+ R R R
Sbjct: 260 KERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRER 319
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRS----------------RSRERKKSRSRSRE 112
R RER R R RE ++ R + RERK+ R R ER++ R R R+
Sbjct: 320 ERERERE-RERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERD 378
Query: 113 RKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNT 172
R+ R R R R R + R R + RD ++ EK R R RGR
Sbjct: 379 RQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQR------EREKDRESERGRER 432
Query: 173 AMDAQEALARRLERAKKLQEQREKE 197
+ ++ R +R ++ Q ++
Sbjct: 433 GREREKQKGRERDRERQTDRQAGRQ 457
Score = 84.3 bits (207), Expect = 2e-16
Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 37 DKGRERLNSSENGEDRHKRKERKSSRG--RSHSRSRSRERRHRSRSRERKKSRSRSRERK 94
D R R S E+ R + K + G R +R + RERR R ER+ R R R R+
Sbjct: 25 DFSRRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRRE 84
Query: 95 KSRSRSRERKKSRSRSRERKR-------RIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKR 147
K R R R+R + R R RE++R R R R + R+R + R R R R RDR+
Sbjct: 85 KDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTD 144
Query: 148 IEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
++ R R + R R + R ER K QE+RE+ E+Q+++E
Sbjct: 145 GQRERERQRDAEKERERQTDRERQRQTERNRQKER--EREKNRQERRER---ERQREKE 198
Score = 84.0 bits (206), Expect = 2e-16
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 17 KDKSSKKHKSEEHNDK-EHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRE-- 73
+++ ++ + E N K E ++ RER E DR K +ERK R R R+R+
Sbjct: 301 RERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTG 360
Query: 74 -----RRHRSRSRERKKSRSRSRERK-KSRSRSRERKKSRSRSRER---------KRRIR 118
+ R R RER++ R +RER+ + R R R+R+K R R E+ K+R R
Sbjct: 361 REGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQRER 420
Query: 119 SRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRT-PSPPPFRGRN 171
+ R R R R R R + + R RDR+++ ++ R S +PPP R+
Sbjct: 421 EKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARS 474
Score = 82.4 bits (202), Expect = 6e-16
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
K+ RR E ++ +K + + ++E ++ RER E +R + ++R++ R R R
Sbjct: 286 KRQRRTERDRETERKRERQRERERERERNRKRER----ERERERERERQRETERDREKER 341
Query: 69 SRSRERR---HRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRS 125
R R+R+ R R+R+ + R ER++ R R R+R+ +R R + R R R + R
Sbjct: 342 ERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERE 401
Query: 126 RHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARR 183
R + R R + R+R+K E R R R R R D Q R+
Sbjct: 402 RQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRK 459
Score = 65.1 bits (157), Expect = 1e-10
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++GRR +++ ++ + + + ++ R+R DR K +ER++ + R R
Sbjct: 361 REGRRQAERERERERERDRQSAREREERERDRDR--------DRQKERERQTEKDRDGQR 412
Query: 69 SRSRER-RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR 115
++R R + R ER + R R RE++K R R RER+ R R+RKR
Sbjct: 413 ETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKR 460
Score = 55.8 bits (133), Expect = 6e-08
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
+Q R +++ + + E ++E D+ R++ + +DR ++E + R R R
Sbjct: 365 RQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDR 424
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRS 108
R R R RER+K + R R+R++ R R++ RS
Sbjct: 425 E---SERGRERGREREKQKGRERDRERQTDRQAGRQRKRS 461
Score = 37.7 bits (86), Expect = 0.017
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Query: 9 KQGRRHESKDK-----SSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRG 63
K+ R KD+ + K+ + E+ + E ++GRER DR ++ +R++ R
Sbjct: 398 KERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQ 457
Query: 64 RSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 123
R S +RS + +R + +S + K + +R + SR R
Sbjct: 458 RKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKSSPEDPKAASTRFPWGRPAKASRGRV 517
Query: 124 RSRHRHRTR 132
R R R
Sbjct: 518 AGRRRWEPR 526
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 103 bits (257), Expect = 3e-22
Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRE-RLNSSENGEDRHKRKERKSSRGRSHSRSRSRE 73
E K+K K+ + + +++ + RE R E + +RK R+ R R+R RE
Sbjct: 229 ELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRE 288
Query: 74 RRHRSRSRERKKSRSR----SRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
RR RSRSR R SR+ SR R RSRSRER++SRSR R RSRS RS +H
Sbjct: 289 RRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRR-----RSRSHDRSERKH 343
Query: 130 RTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKK 189
R+RSR R RS+SRDRK + + R R RG + + ++ +R +
Sbjct: 344 RSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDT 403
Query: 190 LQEQREKE 197
E +E +
Sbjct: 404 NTESKESD 411
Score = 100 bits (250), Expect = 2e-21
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRK--ERKSSRGRSHSRS 69
R E +++ K+ + EE +KE + D+ R + + S + RH + +R+ SR R H RS
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRSRS---RHSSRTSDRRCSRSRDHKRS 317
Query: 70 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
RSRERR RSRSR+R++SRS R +K RSRSR+R++S+SR R + + RS+SR R +
Sbjct: 318 RSRERR-RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDR---KSYKHRSKSRDREQD 373
Query: 130 RTRSRSRTRSRSRDRKKRIEKPRRFSRS 157
R +S+ + + S D+K ++ R +S
Sbjct: 374 R-KSKEKEKRGSDDKKSSVKSGSREKQS 400
Score = 95.9 bits (237), Expect = 5e-20
Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 11/155 (7%)
Query: 9 KQGRRHESKDKSSK-KHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
K +R E D+ + K + +E ++E ++ RE E+ + KER R R
Sbjct: 233 KLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRER-RK 291
Query: 68 RSRSRERRHRSRSRERKKSRSR----SRERKKSRSRSRERKKSRSRSR-ERKRRIRSRSR 122
RSRSR R H SR+ +R+ SRSR SR R++ RSRSR+R++SRS R ERK R RSR R
Sbjct: 292 RSRSRSR-HSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDR 350
Query: 123 SRSRHRHRT--RSRSRTRSRSRDRKKRIEKPRRFS 155
RS+ R R + RS++R R +DRK + EK +R S
Sbjct: 351 RRSKSRDRKSYKHRSKSRDREQDRKSK-EKEKRGS 384
Score = 91.3 bits (225), Expect = 1e-18
Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
Query: 8 LKQGRRHESKDKSSKKHKSE-EHNDKEHSSDKGRERLNSSENGEDRHK-----RKERKSS 61
L++ +D+ KK K E E +KE ++ E+R K R+ RK S
Sbjct: 234 LRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Query: 62 RGRSHSRSRSRERRHRSRSRERKKSRSR----SRERKKSRSRSRERKKSRSRSRERKRRI 117
R RS SR+ +RR SRSR+ K+SRSR SR R + RSRS +R + + RSR R RR
Sbjct: 294 RSRSRHSSRTSDRRC-SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRR- 351
Query: 118 RSRSRSRSRHRHRTRSRSRTRSR-SRDRKKR 147
RS+SR R ++HR++SR R + R S++++KR
Sbjct: 352 RSKSRDRKSYKHRSKSRDREQDRKSKEKEKR 382
Score = 86.3 bits (212), Expect = 4e-17
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 50 EDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSR 109
E KR E R + RE R + R RER++ RERK+ R ER+K R+R
Sbjct: 232 EKLRKRTEEPDRDERLKKEKQEREEREKEREREREE-----RERKRRREEE-EREKERAR 285
Query: 110 SRERKRRIRSRSR--SRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPF 167
RER++R RSRSR SR+ R +RSR RSRSR+R++ + RR SRS R+
Sbjct: 286 DRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER---- 341
Query: 168 RGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
+ R+ + D + + +R + K + R++E K K++E
Sbjct: 342 KHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Score = 59.7 bits (143), Expect = 4e-09
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 12 RRHESKDKSSKKHKSEEHN---DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
RR S+ +S ++ + ++H + RER S R + +R + RS SR
Sbjct: 289 RRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSR 348
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
R RR +SR R+ K RS+SR+R++ R + ++K + S ++K ++S SR +
Sbjct: 349 DR---RRSKSRDRKSYKHRSKSRDREQDR---KSKEKEKRGSDDKKSSVKSGSREKQSED 402
Query: 129 HRTRSR 134
T S+
Sbjct: 403 TNTESK 408
Score = 42.7 bits (99), Expect = 5e-04
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RR S D+S +KH+S + R+R R K ++RKS + RS SR R
Sbjct: 331 RRSRSHDRSERKHRS-----------RSRDR--------RRSKSRDRKSYKHRSKSRDRE 371
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRS 121
++R+ + + + R +S + SR + E + S+ + K + S
Sbjct: 372 QDRKSKEKEK-RGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNGTS 420
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 103 bits (257), Expect = 3e-22
Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRE-RLNSSENGEDRHKRKERKSSRGRSHSRSRSRE 73
E K+K K+ + + +++ + RE R E + +RK R+ R R+R RE
Sbjct: 229 ELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRE 288
Query: 74 RRHRSRSRERKKSRSR----SRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
RR RSRSR R SR+ SR R RSRSRER++SRSR R RSRS RS +H
Sbjct: 289 RRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRR-----RSRSHDRSERKH 343
Query: 130 RTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKK 189
R+RSR R RS+SRDRK + + R R RG + + ++ +R +
Sbjct: 344 RSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDT 403
Query: 190 LQEQREKE 197
E +E +
Sbjct: 404 NTESKESD 411
Score = 100 bits (250), Expect = 2e-21
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRK--ERKSSRGRSHSRS 69
R E +++ K+ + EE +KE + D+ R + + S + RH + +R+ SR R H RS
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRSRS---RHSSRTSDRRCSRSRDHKRS 317
Query: 70 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
RSRERR RSRSR+R++SRS R +K RSRSR+R++S+SR R + + RS+SR R +
Sbjct: 318 RSRERR-RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDR---KSYKHRSKSRDREQD 373
Query: 130 RTRSRSRTRSRSRDRKKRIEKPRRFSRS 157
R +S+ + + S D+K ++ R +S
Sbjct: 374 R-KSKEKEKRGSDDKKSSVKSGSREKQS 400
Score = 95.9 bits (237), Expect = 5e-20
Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 11/155 (7%)
Query: 9 KQGRRHESKDKSSK-KHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
K +R E D+ + K + +E ++E ++ RE E+ + KER R R
Sbjct: 233 KLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRER-RK 291
Query: 68 RSRSRERRHRSRSRERKKSRSR----SRERKKSRSRSRERKKSRSRSR-ERKRRIRSRSR 122
RSRSR R H SR+ +R+ SRSR SR R++ RSRSR+R++SRS R ERK R RSR R
Sbjct: 292 RSRSRSR-HSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDR 350
Query: 123 SRSRHRHRT--RSRSRTRSRSRDRKKRIEKPRRFS 155
RS+ R R + RS++R R +DRK + EK +R S
Sbjct: 351 RRSKSRDRKSYKHRSKSRDREQDRKSK-EKEKRGS 384
Score = 91.3 bits (225), Expect = 1e-18
Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
Query: 8 LKQGRRHESKDKSSKKHKSE-EHNDKEHSSDKGRERLNSSENGEDRHK-----RKERKSS 61
L++ +D+ KK K E E +KE ++ E+R K R+ RK S
Sbjct: 234 LRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Query: 62 RGRSHSRSRSRERRHRSRSRERKKSRSR----SRERKKSRSRSRERKKSRSRSRERKRRI 117
R RS SR+ +RR SRSR+ K+SRSR SR R + RSRS +R + + RSR R RR
Sbjct: 294 RSRSRHSSRTSDRRC-SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRR- 351
Query: 118 RSRSRSRSRHRHRTRSRSRTRSR-SRDRKKR 147
RS+SR R ++HR++SR R + R S++++KR
Sbjct: 352 RSKSRDRKSYKHRSKSRDREQDRKSKEKEKR 382
Score = 86.3 bits (212), Expect = 4e-17
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 50 EDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSR 109
E KR E R + RE R + R RER++ RERK+ R ER+K R+R
Sbjct: 232 EKLRKRTEEPDRDERLKKEKQEREEREKEREREREE-----RERKRRREEE-EREKERAR 285
Query: 110 SRERKRRIRSRSR--SRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPF 167
RER++R RSRSR SR+ R +RSR RSRSR+R++ + RR SRS R+
Sbjct: 286 DRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER---- 341
Query: 168 RGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
+ R+ + D + + +R + K + R++E K K++E
Sbjct: 342 KHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Score = 59.7 bits (143), Expect = 4e-09
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 12 RRHESKDKSSKKHKSEEHN---DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
RR S+ +S ++ + ++H + RER S R + +R + RS SR
Sbjct: 289 RRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSR 348
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
R RR +SR R+ K RS+SR+R++ R + ++K + S ++K ++S SR +
Sbjct: 349 DR---RRSKSRDRKSYKHRSKSRDREQDR---KSKEKEKRGSDDKKSSVKSGSREKQSED 402
Query: 129 HRTRSR 134
T S+
Sbjct: 403 TNTESK 408
Score = 42.7 bits (99), Expect = 5e-04
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RR S D+S +KH+S + R+R R K ++RKS + RS SR R
Sbjct: 331 RRSRSHDRSERKHRS-----------RSRDR--------RRSKSRDRKSYKHRSKSRDRE 371
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRS 121
++R+ + + + R +S + SR + E + S+ + K + S
Sbjct: 372 QDRKSKEKEK-RGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNGTS 420
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 102 bits (254), Expect = 6e-22
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)
Query: 19 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER-RHR 77
+S K ++ + + H+ K R SS R KR + K R RSH+RSRSR++ R R
Sbjct: 296 ESGKSNERKGGRSRSHTRSKSR----SSSKSHSRRKRSQSKH-RSRSHNRSRSRQKDRRR 350
Query: 78 SRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRT 137
S+S +K+S+SR R + +SRS SR+++K + K R++ + R + R R + R + +
Sbjct: 351 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKE 410
Query: 138 RSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKE 197
R +++DR K EK R + R R + D + + ++ K+ ++ R KE
Sbjct: 411 RGKNKDRDKEREKDREKDKEKDRERE----REKEHEKDRDKEKEKEQDKEKEREKDRSKE 466
Query: 198 MVEKQKQQE 206
+ EK+K+ +
Sbjct: 467 IDEKRKKDK 475
Score = 93.6 bits (231), Expect = 3e-19
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
+ H + +S KH+S HN + S K R R S HK++ + R +S SRS S
Sbjct: 321 KSHSRRKRSQSKHRSRSHN-RSRSRQKDRRRSKSP------HKKRSKSRERRKSRSRSHS 373
Query: 72 RERR----------------HRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR 115
R++R R + RER+K R + +ER K++ R +ER+K R + +E+ R
Sbjct: 374 RDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDR 433
Query: 116 -RIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAM 174
R R + + R + + + + + + R +DR K I++ R+ + SRTP P + +
Sbjct: 434 EREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKK-SRTP-PRSYNASRRSR 491
Query: 175 DAQEALARRLERAKKLQEQREKEMVEKQKQ 204
+ RR R+ + K + K +
Sbjct: 492 SSSRERRRRRSRSSSRSPRTSKTIKRKSSR 521
Score = 92.8 bits (229), Expect = 4e-19
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++ R+ S+ S K K KE K ++R E ++R K KER ++ R R
Sbjct: 362 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKER 421
Query: 69 SRSRER---RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRS 125
+ RE+ + R R RE++ + R +E++K + + +ER+K RS+ + KR+ +SR+
Sbjct: 422 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 481
Query: 126 R-----HRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEAL 180
R R R+ SR R R RSR + + R SR+PSP R RN +
Sbjct: 482 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP---RSRN------KKD 532
Query: 181 ARRLERAKKLQEQREKE 197
+R + + E+RE+E
Sbjct: 533 KKREKERDHISERRERE 549
Score = 85.9 bits (211), Expect = 5e-17
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+K+ R + KD+ K+ + E+ +KE K ++R E ++ K K+R+ R + H
Sbjct: 384 IKEKERVKEKDRE-KEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHE 442
Query: 68 RSRSRER-RHRSRSRERKKSRSRS-----RERKKSRSRSRE---RKKSRSRSRERKRRIR 118
+ R +E+ + + + +ER+K RS+ ++ KKSR+ R ++SRS SRER+RR R
Sbjct: 443 KDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR-R 501
Query: 119 SRSRSRSRHRHRTRSRSRTRS---RSRDRK-KRIEKPRRFSRSLSRTPSPPPFRGRNTAM 174
SRS SRS +T R +RS RSR++K K+ EK R R +
Sbjct: 502 SRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDR 561
Query: 175 DAQEALARRLERAKKLQEQREKE 197
D +E L + K+ + +E +
Sbjct: 562 DGKEKLEKNSTSLKEKEHNKEPD 584
Score = 46.6 bits (109), Expect = 4e-05
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+ + R+ + K ++ + + + S ++ R R SS K +RKSSR S
Sbjct: 467 IDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPS-- 524
Query: 68 RSRSRERRHRSRSRERKK-SRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 126
RSR ++ + R +ER S R RER S +S S R+ K ++ S S
Sbjct: 525 -PRSRNKKDKKREKERDHISERRERERSTSMRKS-------SNDRDGKEKLEKNSTSLKE 576
Query: 127 HRHRTRSRSRTRSRSRDR 144
H S D+
Sbjct: 577 KEHNKEPDSSVSKEVDDK 594
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 102 bits (254), Expect = 6e-22
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 10/189 (5%)
Query: 19 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER-RHR 77
+S K ++ + + H+ K R SS R KR + K R RSH+RSRSR++ R R
Sbjct: 180 ESGKSNERKGGRSRSHTRSKSR----SSSKSHSRRKRSQSKH-RSRSHNRSRSRQKDRRR 234
Query: 78 SRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRT 137
S+S +K+S+SR R + +SRS SR+++K + K R++ + R + R R + R + +
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKE 294
Query: 138 RSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKE 197
R +++DR K EK R + R R + D + + ++ K+ ++ R KE
Sbjct: 295 RGKNKDRDKEREKDREKDKEKDRERE----REKEHEKDRDKEKEKEQDKEKEREKDRSKE 350
Query: 198 MVEKQKQQE 206
+ EK+K+ +
Sbjct: 351 IDEKRKKDK 359
Score = 93.6 bits (231), Expect = 3e-19
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
+ H + +S KH+S HN + S K R R S HK++ + R +S SRS S
Sbjct: 205 KSHSRRKRSQSKHRSRSHN-RSRSRQKDRRRSKSP------HKKRSKSRERRKSRSRSHS 257
Query: 72 RERR----------------HRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR 115
R++R R + RER+K R + +ER K++ R +ER+K R + +E+ R
Sbjct: 258 RDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDR 317
Query: 116 -RIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAM 174
R R + + R + + + + + + R +DR K I++ R+ + SRTP P + +
Sbjct: 318 EREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKK-SRTP-PRSYNASRRSR 375
Query: 175 DAQEALARRLERAKKLQEQREKEMVEKQKQ 204
+ RR R+ + K + K +
Sbjct: 376 SSSRERRRRRSRSSSRSPRTSKTIKRKSSR 405
Score = 92.8 bits (229), Expect = 4e-19
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++ R+ S+ S K K KE K ++R E ++R K KER ++ R R
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKER 305
Query: 69 SRSRER---RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRS 125
+ RE+ + R R RE++ + R +E++K + + +ER+K RS+ + KR+ +SR+
Sbjct: 306 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 365
Query: 126 R-----HRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEAL 180
R R R+ SR R R RSR + + R SR+PSP R RN +
Sbjct: 366 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP---RSRN------KKD 416
Query: 181 ARRLERAKKLQEQREKE 197
+R + + E+RE+E
Sbjct: 417 KKREKERDHISERRERE 433
Score = 85.9 bits (211), Expect = 5e-17
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+K+ R + KD+ K+ + E+ +KE K ++R E ++ K K+R+ R + H
Sbjct: 268 IKEKERVKEKDRE-KEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHE 326
Query: 68 RSRSRER-RHRSRSRERKKSRSRS-----RERKKSRSRSRE---RKKSRSRSRERKRRIR 118
+ R +E+ + + + +ER+K RS+ ++ KKSR+ R ++SRS SRER+RR R
Sbjct: 327 KDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR-R 385
Query: 119 SRSRSRSRHRHRTRSRSRTRS---RSRDRK-KRIEKPRRFSRSLSRTPSPPPFRGRNTAM 174
SRS SRS +T R +RS RSR++K K+ EK R R +
Sbjct: 386 SRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDR 445
Query: 175 DAQEALARRLERAKKLQEQREKE 197
D +E L + K+ + +E +
Sbjct: 446 DGKEKLEKNSTSLKEKEHNKEPD 468
Score = 46.6 bits (109), Expect = 4e-05
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+ + R+ + K ++ + + + S ++ R R SS K +RKSSR S
Sbjct: 351 IDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPS-- 408
Query: 68 RSRSRERRHRSRSRERKK-SRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 126
RSR ++ + R +ER S R RER S +S S R+ K ++ S S
Sbjct: 409 -PRSRNKKDKKREKERDHISERRERERSTSMRKS-------SNDRDGKEKLEKNSTSLKE 460
Query: 127 HRHRTRSRSRTRSRSRDR 144
H S D+
Sbjct: 461 KEHNKEPDSSVSKEVDDK 478
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 100 bits (249), Expect = 2e-21
Identities = 73/164 (44%), Positives = 96/164 (58%), Gaps = 21/164 (12%)
Query: 50 EDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSR 109
ED+ + R+S G SRSRSR RR RSRSR R+ SRSRSR KSRSRSR R K RSR
Sbjct: 180 EDKPRTSHRRSYSG---SRSRSRSRR-RSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSR 235
Query: 110 SRERKRRIRSRSRS-----RSRHRH-RTRS-----RSRTRSRSRDRKKRIE---KPRRFS 155
SR + R+ RS+S+S R H H R+RS +SR+RSRSR K+ + K + S
Sbjct: 236 SRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRS 295
Query: 156 RSLSRTPSP---PPFRGRNTAMDAQEALARRLERAKKLQEQREK 196
RS SR+ SP PP + R+ + + A +R R++ R +
Sbjct: 296 RSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSR 339
Score = 85.9 bits (211), Expect = 5e-17
Identities = 71/199 (35%), Positives = 101/199 (50%), Gaps = 17/199 (8%)
Query: 3 RTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHS--SDKGRERLNSSENGEDRHKRKERKS 60
RTN + + R + ++ K E N + DK R S +G R R+S
Sbjct: 145 RTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRS 204
Query: 61 -SRGRSHSRSRSRE-RRHRSRSRERKKSRSRSRER-KKSRSRSRERKKS--------RSR 109
SR R SRSRSR + RSRSR R K RSRSR + +KSRS+S+ + KS RSR
Sbjct: 205 RSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSR 264
Query: 110 SRERKRRIRSRSRSRS-RHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFR 168
S++ + RSRSRSRS + + +S++RSRS+ R P S +R+ SPPP R
Sbjct: 265 SKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRS---NSPLPVPPSKARSVSPPPKR 321
Query: 169 GRNTAMDAQEALARRLERA 187
+ + + +R R+
Sbjct: 322 ATSRSRSRSRSKSRSRSRS 340
Score = 80.1 bits (196), Expect = 3e-15
Identities = 62/165 (37%), Positives = 80/165 (48%), Gaps = 36/165 (21%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 74
E K ++S + + S + R R S R K R SR RS RSRSR +
Sbjct: 180 EDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSK 239
Query: 75 RHRSRSRERKK----------SRSRSR-ERKKSRSRSRERK---------KSRSRSRERK 114
+SRS+ + K SRSRS+ E +KSRSRSR R KS+SRSR +
Sbjct: 240 GRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQS 299
Query: 115 R----------RIRS------RSRSRSRHRHRTRSRSRTRSRSRD 143
R + RS R+ SRSR R R++SRSR+RS SRD
Sbjct: 300 RSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD 344
Score = 61.6 bits (148), Expect = 1e-09
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 38/142 (26%)
Query: 12 RRHESKDKSSKKHKSE---EHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRG-RSHS 67
RR S+ + S + +S + + S KGR R S + + KS RG SHS
Sbjct: 202 RRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHS 261
Query: 68 RSRSRERRHRSRSRERK-------------KSRSRSRERKKS------------------ 96
RSRS++ +SRSR R KSRSRS+ R S
Sbjct: 262 RSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKR 321
Query: 97 ---RSRSRERKKSRSRSRERKR 115
RSRSR R KSRSRSR R
Sbjct: 322 ATSRSRSRSRSKSRSRSRSSSR 343
Score = 57.4 bits (137), Expect = 2e-08
Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSS----DKGRERLNS---SENGEDRHKRKERKSSR 62
+GR+ SK KS K H+ S +K R R S ENG+ K K R S+
Sbjct: 239 KGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQ 298
Query: 63 GRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSR 107
RS+S + RS S K++ SRSR R +S+SRSR R SR
Sbjct: 299 SRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSR 343
Score = 34.3 bits (77), Expect = 0.19
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 115 RRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAM 174
R I + R+ S R + SRSR+RSR R R + R SRS+S++ S R + +
Sbjct: 177 RLIEDKPRT-SHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSR 235
Query: 175 DAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
+ R + K + R + + ++
Sbjct: 236 SRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKD 267
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 100 bits (248), Expect = 3e-21
Identities = 72/233 (30%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSS-DKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
++G S D+ ++ K + ++E +K R R S + G +R + + R+ R RS S
Sbjct: 283 REGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRS 342
Query: 68 RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSR------- 120
R R +RR R R RE++ R R R+R + R ER+K R RSRER + RSR
Sbjct: 343 RDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKK 402
Query: 121 -----------------------SRSRSRHR-HRTRSRSRT---RSRSRDRKKRIEKPRR 153
SRSRSR R HR+RSRSR RSRSR ++K K +
Sbjct: 403 HKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKS-SKHKN 461
Query: 154 FSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
S+ S S +GR +++ + + K + R KE K+ +
Sbjct: 462 ESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSD 514
Score = 96.7 bits (239), Expect = 3e-20
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH-SRSRS 71
R S+D+ + + +KE+ + R+R E G +R K +ER R + SR
Sbjct: 339 RSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEV 398
Query: 72 RERRH-------------RSRSRERKKSRSRSRERK-KSRSRSRER-KKSRSRSRERKRR 116
E++H R +E+K SRSRSRERK +SRSRSR K+SRSRS+E+ +
Sbjct: 399 EEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSK 458
Query: 117 IRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDA 176
++ S+ +S R R+ S+ RT S + +K+ + SR SR+ R + + D
Sbjct: 459 HKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQ 518
Query: 177 QEALARRLERAKKLQEQREKEMVEKQK 203
+ RR ++ + QE +EK+ K +
Sbjct: 519 SDKHDRRRSQSIE-QESQEKQHKNKDE 544
Score = 93.6 bits (231), Expect = 3e-19
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 23/219 (10%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RR S+++ + +S + D+ RE+ N DR KER + R + RSR
Sbjct: 328 RRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRE 387
Query: 72 RERRHRSRS----RERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRS-----R 122
R + RSR ++ K+ + R R R +E+K SRSRSRERK R RSRS R
Sbjct: 388 RSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKR 447
Query: 123 SRSRHRHRT---------RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTA 173
SRSR + ++ +S R+RS S+ R +EK ++ S S+ S R + +
Sbjct: 448 SRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERS 507
Query: 174 -----MDAQEALARRLERAKKLQEQREKEMVEKQKQQEI 207
D+++ + R + EQ +E K K + +
Sbjct: 508 HKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKDETV 546
Score = 84.7 bits (208), Expect = 1e-16
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RR S +S ++ +S H+ + H S + DR +E++ R ++ R
Sbjct: 264 RRSLSPRRSPRRSRSRSHHREGHGS-----------SSFDRELEREKERQRLEREAKERE 312
Query: 72 RER-----------RHRSRSRERKKSRSRSRERK-KSRSRSRERKKSRSRSRERKRRI-R 118
+ER R RSRSRER +SRSRSR+RK R R RER+K R R R R +
Sbjct: 313 KERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDK 372
Query: 119 SRSRSRSRHRHRTRSRS---RTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMD 175
R R + R R+R RS R+R ++K + +K R R R R+ + +
Sbjct: 373 ERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRE 432
Query: 176 AQEALARRLERAKKLQEQREKEMVEKQKQQ 205
+ R A K R KE K K +
Sbjct: 433 RKHRSRSRSRNAGKRSRSRSKEKSSKHKNE 462
Score = 82.0 bits (201), Expect = 8e-16
Identities = 61/159 (38%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 51 DRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRS 110
DRH + R S RS S RS RR RSRS R+ S S +R+ R + R+R + ++
Sbjct: 252 DRHVERRRSRSPRRSLSPRRS-PRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKE 310
Query: 111 RERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGR 170
RE++RR RSRS R R R+RSR R RSRSR R + K R R R R R
Sbjct: 311 REKERR-RSRSIDRGLERRRSRSRERHRSRSRSRDR---KGDRRDRDREREKENERGRRR 366
Query: 171 NTAMDAQEALARRLERAK---KLQEQREKEMVEKQKQQE 206
+ D + R ER + + +EQR + VE++K +E
Sbjct: 367 DRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKE 405
Score = 61.2 bits (147), Expect = 1e-09
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 9 KQGRRHESKDKSSKKHKSE--------EHNDKEHSSDKGRERLNSSENGEDRHKRKERKS 60
K RRH + SKK K +H + S + G+ + S+ +HK + ++
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEK 466
Query: 61 SRGRSHSRSRSR-----ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR 115
S RS S S+ R + + R S ++KSR RSR +++S R K +S +R R
Sbjct: 467 SNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDR-R 525
Query: 116 RIRSRSRSRSRHRHRTRSRS 135
R +S + +H+ + +
Sbjct: 526 RSQSIEQESQEKQHKNKDET 545
Score = 47.4 bits (111), Expect = 2e-05
Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 73 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERK-RRIRSRSRSRSRHRH-- 129
+++ ++R R+ KK +E + R ER++SRS R RR RSRSRS HR
Sbjct: 230 DQQIKTRPRKIKKD---GKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGH 286
Query: 130 ------RTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARR 183
R R + R R K EK RR SRS+ R R R + R+
Sbjct: 287 GSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRK 346
Query: 184 LERAKKLQEQREKE 197
+R + +REKE
Sbjct: 347 GDRRDR-DREREKE 359
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 98.6 bits (244), Expect = 8e-21
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
+ + +D+ K+ + +KE + ++ RE+ E +R K+K R+ R R R R
Sbjct: 87 KTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERD 146
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 131
R+ R + R R+ +K R RE + R R RER+K + R ER R R R + R R
Sbjct: 147 RD-REKERERQTEKDRDGQRETETERERDREREKQKERETERD---RDRQRDTEKERERQ 202
Query: 132 RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQ 191
R R R R +++ E R R R R R D + R+ ER K+ +
Sbjct: 203 TDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRER--DRKEERKKERK 260
Query: 192 EQREKEMVEKQKQQE 206
++R+KE EK+K+++
Sbjct: 261 KERKKERKEKKKEEK 275
Score = 85.5 bits (210), Expect = 7e-17
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 9 KQGRRHESKDKSSKKHKSEE-----HNDKEHSSDKGRERLNSS----ENGEDRHKRKERK 59
K+ R K+K + +++ E D+E KGRER E DR K +ER+
Sbjct: 97 KRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQ 156
Query: 60 SSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRI-- 117
+ + R R ER R R RE++K R R+R + R +ER++ R R+R+R+
Sbjct: 157 TEKDRDGQRETETERE-RDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQT 215
Query: 118 -------RSRSRSRSRHRHRTRSRSR--TRSRSRDRKKRIEKPRRFSRSLSR 160
R R R R R R R R R R RDRK+ +K R+ R R
Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKER 267
Score = 81.3 bits (199), Expect = 1e-15
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 9 KQGRRHESKDKSSKKHKS-----EEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRG 63
KQ R +D+ ++ + E E D RE E +R K+KER++ R
Sbjct: 129 KQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERD 188
Query: 64 RSHSRSRSRERRH---RSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER-KRRIRS 119
R R +ER R R R+RK R RE + R +R++ R R R+R K R R
Sbjct: 189 RDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRE 248
Query: 120 RSRSRSRHRHRTRSRSRTR-SRSRDRKKRIEKPRRFSRSLS 159
R R R + R + R + R + ++ K+R +K R++ +S
Sbjct: 249 RDRKEERKKERKKERKKERKEKKKEEKRREDKKRKWGEGIS 289
Score = 78.6 bits (192), Expect = 9e-15
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 37 DKGRERLNSSENGEDRHKRKERKSSRG--RSHSRSRSRERRHRSRSRERKKSRSRSR-ER 93
D R RL S E+ + K + G R R R RE+ + R R+RK+ R R R E+
Sbjct: 48 DFSRGRLGSQESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEK 107
Query: 94 KKSRSRSRERKKSRSRSRER---KRRIRSRSRSRSRHRHRTRSRSRTRSRSRDR------ 144
+ +R+R RE++ R RER K R R R R R R R R R + R R +DR
Sbjct: 108 ETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRET 167
Query: 145 KKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKE 197
+ E+ R + R R R+T + + R +R +K Q +R++E
Sbjct: 168 ETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRE 220
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 98.2 bits (243), Expect = 1e-20
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 10 QGRRHE-SKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
QGR E +D+ ++ + + +D+ ++ RER E +R + +ER+ R R R
Sbjct: 648 QGRNDELERDERREERRVDRVDDRR--DERARERDRERERDRERERERERERDREREKER 705
Query: 69 SRSRER-RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRH 127
RER R R R RE+++ R R R+R R R RER++ R + RER+R R R R R R
Sbjct: 706 ELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERE 765
Query: 128 RHRTRSRSRTRSRSRDRKKRIEK 150
R R R R R R+R RD+++ ++
Sbjct: 766 RERERERERERARERDKERERQR 788
Score = 96.3 bits (238), Expect = 4e-20
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
RH+ ++ ++ + E + D+ ER + +R + +ER+ R R R + R
Sbjct: 646 RHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKER 705
Query: 73 E-RRHRSRSRERKKSRSRSRERKKSR--SRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
E R R+R RER++ + R RER + R R RER++ R R +ER+R R R R R R
Sbjct: 706 ELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERE 765
Query: 130 RTRSRSRTRSRSRDRKKRIEKPR 152
R R R R R R+R+R K E+ R
Sbjct: 766 RERERERERERARERDKERERQR 788
Score = 90.5 bits (223), Expect = 2e-18
Identities = 63/194 (32%), Positives = 93/194 (47%), Gaps = 18/194 (9%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRH------KRKERKSSRGRS 65
RRH +D+ + + + + + E L E E+R +R ER R R
Sbjct: 624 RRHGERDRRDNRERDQRPSSPIRHQGRNDE-LERDERREERRVDRVDDRRDERARERDRE 682
Query: 66 HSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR---RIRSRSR 122
R R RER R R R+R++ + R ER+++R R RER+K R R R+R R R R R R
Sbjct: 683 RERDRERERE-RERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERER 741
Query: 123 SRSRHRHRTRSR-SRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALA 181
R R + R R R R R R R+R++ E+ R R+ R + R D ++
Sbjct: 742 ERDREKEREREREERERERERERERERERERERERARERD------KERERQRDWEDKDK 795
Query: 182 RRLERAKKLQEQRE 195
R +R +K +E RE
Sbjct: 796 GRDDRREKREEIRE 809
Score = 90.1 bits (222), Expect = 3e-18
Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RR E + + E +++ ++ RER E DR + KER+ R R+ R R
Sbjct: 659 RREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELERERARERERE 718
Query: 72 RER---RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
RE+ R R R R+ + R R RER + + R RER++ R R RER+R R R R R R R
Sbjct: 719 REKERDRERDRDRDHDRERERERERDREKEREREREE-RERERERERE-RERERERERER 776
Query: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPP 165
R R + R R R + K + RR R R P
Sbjct: 777 ARERDKERERQRDWEDKDKGRDDRREKREEIREDRNP 813
Score = 87.4 bits (215), Expect = 2e-17
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
R +D+ ++ + E D+E ++ ER + E +R K ++R+ R R H R R R
Sbjct: 681 RERERDRERERERERER-DREREKERELERERAREREREREKERDRERDRDRDHDRERER 739
Query: 73 ER---RHRSRSRER-KKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR-H 127
ER R + R RER ++ R R RER++ R R RER+++R R +ER+R+ + + R
Sbjct: 740 ERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDD 799
Query: 128 RHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDA 176
R R R RD + +R+ S +P P R R + D+
Sbjct: 800 RREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDS 848
Score = 85.9 bits (211), Expect = 5e-17
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 74
E++ ++ + E ++++ + D ER + + D +R +R SS R R+ ER
Sbjct: 597 ETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELER 656
Query: 75 RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSR 134
R ER+ R R +++R R RER++ R R RER+R R R R + R R R+R
Sbjct: 657 DERRE--ERRVDRVDDRRDERARERDRERERDRERERERERE-RDREREKERELERERAR 713
Query: 135 SRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQR 194
R R R ++R + ++ R R R + R + +E R ER ++ + +R
Sbjct: 714 EREREREKERDRERDRDRDHDRERERERERDREKEREREREERER-ERERERERERERER 772
Query: 195 EKEMV-EKQKQQE 206
E+E E+ K++E
Sbjct: 773 ERERARERDKERE 785
Score = 85.1 bits (209), Expect = 9e-17
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGED--RHKRKERKSSRGRSHSRS 69
R + +D+ +++ E D+E ++ RER E + R + +ER+ R + R
Sbjct: 667 RVDDRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRE 726
Query: 70 RSRERRH-RSRSRERKKSRSRSRERKKS-RSRSRERKKSRSRSRERKRRIRSRSRSRSRH 127
R R+R H R R RER++ R + RER++ R R RER++ R R RER+R R+R R + R
Sbjct: 727 RDRDRDHDRERERERERDREKEREREREERERERERERERERERERERE-RARERDKERE 785
Query: 128 RHRT-RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARR 183
R R + + R R++++ I + R S +R + Q RR
Sbjct: 786 RQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRR 842
Score = 82.0 bits (201), Expect = 8e-16
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 9 KQGRRHESKDKSSKKHKS-EEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
++ R +D+ +K + E +E ++ +ER + D + +ER+ R R
Sbjct: 689 RERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKE 748
Query: 68 RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERK---------KSRSRSRERKRRIR 118
R R RE R R R RER++ R R RER+++R R +ER+ K R RE++ IR
Sbjct: 749 REREREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIR 808
Query: 119 SRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRR-----------------FSRSLSRT 161
R H R +S+ R R+ ++ K RR R LS+
Sbjct: 809 EDRNPRDGHDER-KSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQV 867
Query: 162 PSPPPFRG---------RNTAMDAQEALARRLERAKKLQEQREKE---MVEKQKQQ 205
P R R ++ R E +++ +EQ KE V+KQ++Q
Sbjct: 868 VRPQESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQ 923
Score = 77.8 bits (190), Expect = 1e-14
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 30/232 (12%)
Query: 5 NFFLKQGRRHESKDKSSKKHKSEEHNDKEHSS--------DKGRE-----RLNSSENGED 51
N ++ R E +++S + +SE ND+ S +KG +++S + +
Sbjct: 532 NHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSN 591
Query: 52 RHKRKERKSSR----------GRSHSRSRSRERRHRSRSRERKKSRSR---SRERKKSRS 98
H E +SS R +R S ERRH R R + R + S R + R+
Sbjct: 592 YHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRN 651
Query: 99 RSRERKKSRSRSR----ERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRF 154
ER + R R + +R R+R R R R R R R R R R R R+R+K E R
Sbjct: 652 DELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELERER 711
Query: 155 SRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
+R R R R+ D R ER ++ + +RE+E E+++++E
Sbjct: 712 AREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERE 763
Score = 62.0 bits (149), Expect = 8e-10
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 74
E +D S +S + D + D R G D H++++ RS+ R+ RE
Sbjct: 481 EMRDYSRDTKESRDPRDSRSTRDAHDYR---DREGRDTHRKEDTYPEESRSYGRNHLREE 537
Query: 75 RHRS--RSRERKKSRSRSRERKKSRSRSRERKKSRSRSR-ERKRRIRSRS---------R 122
R+ R+ R +SRS R + RSR R + SR R +I S S
Sbjct: 538 SSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWE 597
Query: 123 SRSRHRHRTRSRSR-TRSRSRD---RKKRIEKPRRFSRSLSRTPSPP-PFRGRNTAMDAQ 177
+RS + R R R R ++RD ++ E+ RR +R + PS P +GRN ++
Sbjct: 598 TRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERD 657
Query: 178 EALARRLERAKKLQEQREKEMVEKQKQQE 206
E R R ++ ++R++ E+ +++E
Sbjct: 658 E--RREERRVDRVDDRRDERARERDRERE 684
Score = 60.8 bits (146), Expect = 2e-09
Identities = 65/207 (31%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 3 RTNFFLKQGRRHESKDKSSKKHKSEEHNDKE--HSSDKGRERLNSSE-NGE-----DRHK 54
R+N GR + S+ + ++ K HS + RE+ S E GE D+ K
Sbjct: 1196 RSNRSHTSGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKTKSLEITGERKSRIDQLK 1255
Query: 55 RKE--RKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKK-SRSRSR 111
R E R +S R SRS S RR S + SRS S + SR R +ER + R R
Sbjct: 1256 RGEPSRSTSSDRQDSRSHS-SRRSSPESDRQVHSRSGSFD---SRDRLQERDRYEHDRER 1311
Query: 112 ERKRR-IRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGR 170
ER+RR R R R + R+R R R R R+R++ +K R R R S R R
Sbjct: 1312 ERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVERDR 1371
Query: 171 NTAMDAQEALARRLERAKKLQEQREKE 197
+ D + + ++E K+ + + E E
Sbjct: 1372 DRDRD-RTFESSQIESVKRCEAKLEGE 1397
Score = 57.0 bits (136), Expect = 3e-08
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 31 DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRS 90
D++ SS G R N S + R R R SR RE+ KS +
Sbjct: 1185 DQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKTKSLEIT 1244
Query: 91 RERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEK 150
ERK + + + SRS S +R+ SRS S R + + +RS S D + R+++
Sbjct: 1245 GERKSRIDQLKRGEPSRSTSSDRQ---DSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQE 1301
Query: 151 PRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKE 197
R+ R R R DA + R +R + + +RE+E
Sbjct: 1302 RDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERE 1348
Score = 56.6 bits (135), Expect = 4e-08
Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSS--ENGEDRHKRKERKSSRGRS 65
++ + + D+ +++ H+S + R N S +G+D+ RK S R
Sbjct: 1175 IEDAQHRKPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRD 1234
Query: 66 HSRSRSRERRHRSRSR-----ERKKSRSRSRERKKSRSRSRERKK--------SRSRSRE 112
+++S E +SR + SRS S +R+ SRS S R SRS S +
Sbjct: 1235 REKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFD 1294
Query: 113 RKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNT 172
+ R++ R R R R R R TR R DR + PR R R R R
Sbjct: 1295 SRDRLQERDR-YEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRE------RERER 1347
Query: 173 AMDAQEALARRLERAKKLQEQREKE 197
D + L R ER +R+++
Sbjct: 1348 ERDKRRDLDRERERLISDSVERDRD 1372
Score = 55.8 bits (133), Expect = 6e-08
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 16/161 (9%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSE--NGEDRHKRKERKSSRGRSHSRS 69
RR +++ K ++ S E + E R+ + E +G DR ++ + R SR
Sbjct: 416 RREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRD 475
Query: 70 RSRERRHRSRSRERKKSRS-------------RSRE-RKKSRSRSRERKKSRSRSRERKR 115
R R SR+ K+SR R RE R R ++SRS R R
Sbjct: 476 MRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLR 535
Query: 116 RIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSR 156
SR+ R+ R+ +RS R R R + E P + SR
Sbjct: 536 EESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSR 576
Score = 53.5 bits (127), Expect = 3e-07
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHK--RKERKSSRGRSHSRSR 70
RH S + +H +H S D+ ER + DR K R+ER+ + +S SR
Sbjct: 390 RHRSPMREKGRH---DHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDH 446
Query: 71 --------SRERRHRSRSRERKKSRSR--SRERKKSRSRSRERKKSR----SRS------ 110
R+RR +R+R++ R R+ ++ R SR+ K+SR SRS
Sbjct: 447 RDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHD 506
Query: 111 -RERKRRIRSR--------SRSRSR-HRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSR 160
R+R+ R R SRS R H SR+ R+ SR+ + + R RS R
Sbjct: 507 YRDREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGR 566
Query: 161 TPSPP 165
P P
Sbjct: 567 VPELP 571
Score = 52.4 bits (124), Expect = 7e-07
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 46/237 (19%)
Query: 11 GRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR---SHS 67
GR H ++ S + ++E N E S+ +R+ S K + SRG SHS
Sbjct: 530 GRNHLREESSRTEIRNESRN--ESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHS 587
Query: 68 RSRSRERRHRSRSRERKKSRSRSRE-RKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 126
+ + +RS ++ R R+ R ++R S ER+ R+ + R + R S
Sbjct: 588 SNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQ---RPSSP 644
Query: 127 HRH-------------------------------------RTRSRSRTRSRSRDRKKRIE 149
RH R R R R R R RDR++ E
Sbjct: 645 IRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKE 704
Query: 150 KPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
+ R+ R R R D R ER + +++RE+E E+++++E
Sbjct: 705 RELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERE 761
Score = 48.9 bits (115), Expect = 7e-06
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGE--DRHK---RKERKSSRGR 64
+GR E + + K +S + HS R +SS++G RH R++R S
Sbjct: 300 RGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSY 359
Query: 65 SHS------RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIR 118
+ RS S H S +RK+S R R + + R + S+S R +RR
Sbjct: 360 QRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERRED 419
Query: 119 SR-SRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQ 177
+R R R + R + +S SRD + E P R R A D +
Sbjct: 420 TRGKRDREKDSREEREYEQDQSSSRDHRDDRE--------------PRDGRDRRDARDTR 465
Query: 178 EALARRLERAKKLQEQRE 195
+ R L ++ +++ RE
Sbjct: 466 D--RRELRDSRDMRDSRE 481
Score = 46.6 bits (109), Expect = 4e-05
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Query: 14 HESKDKSSKKHKSEEHNDKEHSSDKGR-ERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
+ S SS + K + +KGR + +S++ + RH+R+E +RG+ SR
Sbjct: 374 YPSHSLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERRE--DTRGKRDREKDSR 431
Query: 73 ERRHRSRSRERKKSRSRSRERKKSRSR-----SRERKKSR-SRSRERKRRIRSRSRSRSR 126
E R + + + RE + R R +R+R++ R SR R +R SR
Sbjct: 432 EEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKE 491
Query: 127 HRHRTRSRS-RTRSRSRDRKKR 147
R SRS R RDR+ R
Sbjct: 492 SRDPRDSRSTRDAHDYRDREGR 513
Score = 46.2 bits (108), Expect = 5e-05
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 52 RHKRKERKSSRGRSHSRSRSRERRHRSRS-----RERKKSRSRSRERKKSRSRSRERKKS 106
RH+ R+ R S+S +RRH R R+R+K RE ++ +S SR+ +
Sbjct: 390 RHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDD 449
Query: 107 RSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPP 166
R R RR +R R R R R R + + R SRS
Sbjct: 450 REPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRD 509
Query: 167 FRGRNT 172
GR+T
Sbjct: 510 REGRDT 515
Score = 40.4 bits (93), Expect = 0.003
Identities = 49/253 (19%), Positives = 89/253 (35%), Gaps = 52/253 (20%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLN------SSENGEDRHKRKERKSSR 62
++ R ++++ ++ + + DK+ D RE+ + +G D K K+R +
Sbjct: 770 RERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNE 829
Query: 63 GRSHSRSRSRERRHRSRSRERKKSRSRSRER----------KKSRSRS--------RERK 104
G R + RR S + S E+ ++SRS S + R
Sbjct: 830 GSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHLTEDRQGRW 889
Query: 105 KSRSRSRERKRRIR--------------------------SRSRSRSRHRHRTRSRSRTR 138
K R ERK R SR R++ H T
Sbjct: 890 KEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRETS 949
Query: 139 SRSRDRKKRIEKPRRFSRSLSRTPSPPPFRG--RNTAMDAQEALARRLERAKKLQEQREK 196
R+ D K+ K ++ + RG T+ D Q ++ ++ K ++++R+K
Sbjct: 950 DRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKRKK 1009
Query: 197 EMVEKQKQQEIAA 209
+ E AA
Sbjct: 1010 SKGDSDISDEEAA 1022
Score = 37.4 bits (85), Expect = 0.022
Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 18/199 (9%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 69
+GR E +D K ++ E ++ + R+ ++ + D + R +
Sbjct: 118 RGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQREL 177
Query: 70 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
E+ + + E + S E +S+ + S+S +RK +S S S+
Sbjct: 178 MKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKSSSASK----- 232
Query: 130 RTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPP-----------FRGRNTAMDAQE 178
+ R S S D+++ K + + RTPSPPP ++ + D E
Sbjct: 233 KDRKTSAVSSPLLDQQRN-SKTNQSKKKGPRTPSPPPPIPEDIALGKKYKEKYKVKDRIE 291
Query: 179 ALAR-RLERAKKLQEQREK 196
R +R + + QREK
Sbjct: 292 EKTRDGKDRGRDFERQREK 310
Score = 37.0 bits (84), Expect = 0.029
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR------S 65
R E + + +++ + + DK+ ++ R+RL E +R KR++ R R
Sbjct: 1309 RERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVE 1368
Query: 66 HSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER 113
R R R+R S E K E + R + S + +ER
Sbjct: 1369 RDRDRDRDRTFESSQIESVKRCEAKLEGEHERDLESTSRDSLALDKER 1416
Score = 35.4 bits (80), Expect = 0.084
Identities = 28/144 (19%), Positives = 61/144 (42%), Gaps = 33/144 (22%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDR------HKRKERKSSR 62
K+ R + +SS++++ +E +K S DK RE+ E+ R H + E + +
Sbjct: 890 KEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRETS 949
Query: 63 GRSHSRSRSRERRHRSRSRERK---------------------------KSRSRSRERKK 95
R+H ++ + + + +++K K +S ++RKK
Sbjct: 950 DRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKRKK 1009
Query: 96 SRSRSRERKKSRSRSRERKRRIRS 119
S+ S + ++ ++KR R+
Sbjct: 1010 SKGDSDISDEEAAQQSKKKRGPRT 1033
Score = 31.2 bits (69), Expect = 1.6
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
K R+ +D+ ++ + E DK D+ RERL S DR + ++R + S
Sbjct: 1329 KDWPRNRDRDRLRERERERER-DKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESV 1387
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSR 97
R + R+ + + S K R
Sbjct: 1388 KRCEAKLEGEHERDLESTSRDSLALDKER 1416
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 97.4 bits (241), Expect = 2e-20
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 69
+GR++E + + +K ++ ++ E+ +R+ SR S SRS
Sbjct: 137 KGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRS 196
Query: 70 RSR-ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
RSR R+ RSRS K S S+SR R +S SRSR + +SRS+SR R ++ +SRS S+ + R
Sbjct: 197 RSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSR 256
Query: 129 HRTRSRSRTRSRSRDR-KKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERA 187
R+ S ++RS+S+D+ +++I+ + SR+PS R ++ + + RR+E
Sbjct: 257 SRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS----RHKSKSKSRSRSQERRVEEE 312
Query: 188 KKLQEQREKEMVEKQKQQEIAAAAATGGS 216
K+ R + EK +Q + + + GGS
Sbjct: 313 KRGSVSRGRSQ-EKSLRQSRSRSRSKGGS 340
Score = 97.4 bits (241), Expect = 2e-20
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSS-----ENGEDRHKRKERKSSRGRSHS 67
R SK + S+ E+ + HS+ K R + +N ++ K K R SR +S S
Sbjct: 239 RSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKS 298
Query: 68 RSRSRERRHRSRSRERKK-SRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 126
+SRSR + R +R SR RS+E+ +SRSR R K SRSR R R +S+ + + R
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRS-KSKDKRKGR 357
Query: 127 HRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLER 186
R R SRSR+RSRS+ + R +R S++ S R+ + ++++ E
Sbjct: 358 KRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREH 417
Query: 187 AKKLQEQRE 195
AK QRE
Sbjct: 418 AKSESSQRE 426
Score = 96.3 bits (238), Expect = 4e-20
Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 38/232 (16%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
K G R S+ H S + HS K R R SS++ + + + R SR RS SR
Sbjct: 176 KPGSRRRRSYSRSRSH-SRSRSRSRHSR-KSRSRSGSSKSSHSKSRSRSRSGSRSRSKSR 233
Query: 69 SRS----RERRHRSRSRERKKSRSRSRERKKSRSRS-----------------------R 101
SRS R ++ +SRS ++KSRSRS KSRS+S R
Sbjct: 234 SRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSR 293
Query: 102 ERKKSRSRSRERKRRI---------RSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPR 152
+ KS+SRSR ++RR+ R RS+ +S + R+RSRS+ SRSR R + K +
Sbjct: 294 HKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDK 353
Query: 153 RFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQ 204
R R SR S R R+ + +++ ++R +A +++++++ Q +
Sbjct: 354 RKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSR 405
Score = 91.7 bits (226), Expect = 1e-18
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 20/219 (9%)
Query: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLN-SSENGEDRHKRKERKS-SRGRSHSRSRSRER 74
+DK + + + HS + R R + S + K KS SR RS SRSRS+ R
Sbjct: 174 EDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSR 233
Query: 75 -RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER-KRRIRS-------RSRSRS 125
R +SRSR KK +SRS ++KSRSRS KSRS+S+++ + +I++ +SRS S
Sbjct: 234 SRSQSRSRS-KKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 292
Query: 126 RHRHRTRSRSRTRSRSRDRKKR--------IEKPRRFSRSLSRTPSPPPFRGRNTAMDAQ 177
RH+ +++SRSR++ R + +KR EK R SRS SR+ R R+ +
Sbjct: 293 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 352
Query: 178 EALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGS 216
+ R+ R + R + E+ +++ + G S
Sbjct: 353 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSS 391
Score = 91.3 bits (225), Expect = 1e-18
Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 9 KQGRRHESKDKSSKKHKSEEHN---DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRS 65
++ R E K S + +S+E + + S KG R S + + KRK RK SR S
Sbjct: 305 QERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREES 364
Query: 66 HSRSRSRERRHRSRSR-------------ERKKSRSRSRERKKSRSRSRERKKSRSRSRE 112
SRSRSR + RSR R ++K+ RS+ R SRS S+ER+ ++S S +
Sbjct: 365 RSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQ 424
Query: 113 RKRRIRSRS-----RSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPF 167
R+ R S + +RSR R ++S+ S SR R K K R S+S SR+ S P
Sbjct: 425 REGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPS 484
Query: 168 RGRN 171
R R+
Sbjct: 485 RSRS 488
Score = 86.3 bits (212), Expect = 4e-17
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 13 RHESKDKS-SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RH+SK KS S+ + +K S +GR + S R + K SR RS S+S+
Sbjct: 293 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 352
Query: 72 RERRHRSRSRERKKSRSRSRER-KKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
+ R+ R RSRE +SRSRSR + ++SR R +R S+++K+ RS+SRS R
Sbjct: 353 K-RKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSV 411
Query: 131 TRSRSRTRSRSRDRKKRIE--------KPRRFSRSLSRTPSPPPFRGRNTAMDAQEALAR 182
++ R +S S R+ R E + R SRS S++ P R+ + A + +R
Sbjct: 412 SKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSR 471
Query: 183 RLERAK 188
R++
Sbjct: 472 SKSRSR 477
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 95.5 bits (236), Expect = 7e-20
Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 54 KRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER 113
KR + R+ R + RE R R + ++SRS S+ K+SRSR R +SRS SRER
Sbjct: 229 KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRER 288
Query: 114 KRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTA 173
KRR RS+SR + RHRHR+RS SR+RSRS R + + R RS R S FR ++ A
Sbjct: 289 KRRTRSKSREK-RHRHRSRSSSRSRSRSHQRSRHSSRDRSRERS-KRRSSKERFRDQDLA 346
Query: 174 MDAQEALARRLERAKKLQEQREKEMVEKQKQQEIA 208
+ +R+ + + R+++ +K++ E A
Sbjct: 347 SCDR-------DRSSRDRSPRDRDRKDKKRSYESA 374
Score = 84.3 bits (207), Expect = 2e-16
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 33 EHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRE 92
E + +ERL + E+R + + K R RSHS++ +R RSR R +SRS SRE
Sbjct: 234 EKQEKRNQERL---KRREEREREEREKLRRSRSHSKN---PKRSRSREHRRHRSRSMSRE 287
Query: 93 RKK-SRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKP 151
RK+ +RS+SRE K+ R RSR R RSRS RSRH R RSR R++ RS + R +
Sbjct: 288 RKRRTRSKSRE-KRHRHRSRSSSRS-RSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDL 345
Query: 152 RRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEM 198
R S P R R + E+ R E + +E+ E+
Sbjct: 346 ASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
Score = 80.9 bits (198), Expect = 2e-15
Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 19 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKR-KERKSSRGRSHSRSRSRERRHR 77
+ +K E +E + RE+L S + KR + R+ R RS S SR R+RR R
Sbjct: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTR 293
Query: 78 SRSRE-RKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR---HRTRS 133
S+SRE R + RSRS R +SRS R R SR RSRER +R S+ R R + R RS
Sbjct: 294 SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRS 353
Query: 134 RSRTRSRSRDRKKRIEKPRRFSRSLSRT 161
R RDRK +K R + + R+
Sbjct: 354 SRDRSPRDRDRK---DKKRSYESANGRS 378
Score = 77.4 bits (189), Expect = 2e-14
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
KQ +R++ + K ++ + EE S + S RH+ + R R +R
Sbjct: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR-RTR 293
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
S+SRE+RHR RSR SRSRSR ++SR SR+R + RS+ R K R R + +
Sbjct: 294 SKSREKRHRHRSRS--SSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRD 351
Query: 129 HRTRSRSRTRSRSRDRKKR 147
+R RS R R R KKR
Sbjct: 352 RSSRDRS-PRDRDRKDKKR 369
Score = 70.5 bits (171), Expect = 2e-12
Identities = 50/140 (35%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 12 RRHESKDKSSKKHKSEEHN-DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSR 70
RR S K+ K+ +S EH + S + R+R S++ E RH R RS S SR
Sbjct: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRH--------RHRSRSSSR 310
Query: 71 SRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
SR R H+ R R SR RSRER K RS + S +R R R RS + +
Sbjct: 311 SRSRSHQ---RSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDK 367
Query: 131 TRSRSRTRSRSRDRKKRIEK 150
RS RS DR+ E+
Sbjct: 368 KRSYESANGRSEDRRSSEER 387
Score = 64.7 bits (156), Expect = 1e-10
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRS-RSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
RE+ + +K R++ER K R R RE ++ RSR + + RSRSR RHR
Sbjct: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPK-RSRSREHRRHR 280
Query: 131 TRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKL 190
+RS SR R R K R ++ R SRS SR+ S R R+++ D ++R ++
Sbjct: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERF 340
Query: 191 QEQ 193
++Q
Sbjct: 341 RDQ 343
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 95.1 bits (235), Expect = 9e-20
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 32/250 (12%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 69
+ R + + +S + H+ + + R R + G R + R+ SR R+ +R
Sbjct: 544 RSRNTQRRGRSRSARRGRSHSRSPATRGRSRSR-TPARRGRSRSRTPARRRSRSRTPTRR 602
Query: 70 RSRER------RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 123
RSR R R RSR+ R++SR+RS R++SRSRS R+ RSRSR RR RSRSR+
Sbjct: 603 RSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRT 662
Query: 124 RSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP------------------SPP 165
+R R RSRSRT +R R + R P R RS SRTP P
Sbjct: 663 PAR---RGRSRSRTPAR-RSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTP 718
Query: 166 PFRGRNTAMDAQEALARRLERAKKLQEQRE--KEMVEKQKQQEIAAAAATGGSVLNVAAL 223
RGR+ + ++ +R +R + E K + ++ + +++ + S L++
Sbjct: 719 QRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRS 778
Query: 224 LASGTQVTPQ 233
L SG+ P+
Sbjct: 779 L-SGSSPCPK 787
Score = 89.0 bits (219), Expect = 6e-18
Identities = 67/174 (38%), Positives = 90/174 (51%), Gaps = 14/174 (8%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERL-NSSENGEDRHKRKERKSSR-----G 63
Q RR S + + + G R N+ G R R+ R SR G
Sbjct: 512 QWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRG 571
Query: 64 RSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 123
RS SR+ +R R RSR+ R++SRSR+ R++SRSR+ R + RSRSR RR RSR+RS
Sbjct: 572 RSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARR-RSRTRS 629
Query: 124 RSRHRHRTRS------RSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRN 171
R R R+RS RSR+R+ +R + R P R RS SRTP+ R R+
Sbjct: 630 PVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRS 683
Score = 80.5 bits (197), Expect = 2e-15
Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 26/242 (10%)
Query: 16 SKDKS---SKKHKSEEHNDKEH--------SSDKGRERLNS-SENGEDRHKRKE-RKSSR 62
SK++S +K+ KS H ++ +GR R + ++ G R + + R+S
Sbjct: 459 SKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRS 518
Query: 63 GRSHSRSRSRERRHRSRSRER----------KKSRSRSRERKKSRSRSRERKKSRSRSRE 112
+ RSRS +RR RSRS +R ++ RSRS R +S SRS + RSRSR
Sbjct: 519 AQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRS-PATRGRSRSRT 577
Query: 113 RKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKR-IEKPRRFSRSLSRTPSPPPFRGRN 171
RR RSRSR+ +R R R+R+ +R RSRSR +R + R +R SRT SP R R+
Sbjct: 578 PARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS 637
Query: 172 TAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVT 231
+ + +R A++ R + + + + A +G S A T
Sbjct: 638 RSPARRSGRSRSRTPARR-GRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRT 696
Query: 232 PQ 233
P+
Sbjct: 697 PR 698
Score = 78.6 bits (192), Expect = 9e-15
Identities = 64/180 (35%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R S S + DK HS R S + R ++ R HSRSRS
Sbjct: 451 REISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRS 510
Query: 72 RERRHRSRSRER--------KKSRSRSRER--------KKSRSRSRERKKSRSRSRERKR 115
+ R RSRS +R ++ RSRS +R + R RSR ++ RS SR
Sbjct: 511 PQWR-RSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPAT 569
Query: 116 RIRSRSRS---RSRHRHRTRSRSRTRSRSRDRKK-RIEKPRRFSRSLSRTPSPPPFRGRN 171
R RSRSR+ R R R RT +R R+RSR+ R++ R P R RS SRTP+ R R+
Sbjct: 570 RGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRS 629
Score = 74.3 bits (181), Expect = 2e-13
Identities = 73/208 (35%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
RH S S K + +E SS + N S R K SR SRS +
Sbjct: 432 RHASSSPESPKPAPAPGSHREISSSPTSK--NRSHGRAKRDKSHSHTPSRRMGRSRSPAT 489
Query: 73 ERRHRSRSR---ERKKSRSRSRERKKSRS------------RSRERKKSR---SRSRERK 114
+R RSRSR +R SRSRS + ++SRS R R R R SRSR +
Sbjct: 490 AKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQ 549
Query: 115 RRIRSRSRSRSRHRHR---TRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRN 171
RR RSRS R R R TR RSR+R+ +R + R P R RS SRTP+ R R
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPAR-RRSRSRTPTRRRSRSRT 608
Query: 172 TA---MDAQEALARRLERAKKLQEQREK 196
A ARR R + +R +
Sbjct: 609 PARRGRSRSRTPARRRSRTRSPVRRRSR 636
Score = 74.3 bits (181), Expect = 2e-13
Identities = 77/236 (32%), Positives = 103/236 (43%), Gaps = 46/236 (19%)
Query: 3 RTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSS- 61
RT ++GR K + ++ +S +K ++ + R+R SS++ R +R +S
Sbjct: 1752 RTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRR-RDRSGSSQSTSRRRQRSRSRSRV 1810
Query: 62 ----RGRS--HSRSRSRE-------RRHRSRSRERKKSRSRSRER------KKSRSR--- 99
RG S HSRS +R+ RR R RSR SR RSR R K+SRSR
Sbjct: 1811 TRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASP 1870
Query: 100 -----------------SRERKK--SRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSR 140
SR R SR RSR R R RSRSR+ R RSRSRT
Sbjct: 1871 ATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPV 1930
Query: 141 SRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREK 196
+R R+ R P RS SRT PP R R+ + R R + +R +
Sbjct: 1931 TR-RRSRSRTPTTRRRSRSRT--PPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSR 1983
Score = 72.0 bits (175), Expect = 8e-13
Identities = 61/210 (29%), Positives = 88/210 (41%), Gaps = 19/210 (9%)
Query: 15 ESKDKSSKKHK------SEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
E++ ++ +H+ S E +K SS + R + R R RG SR
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSR 1774
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSR------SRERKRRIRSRSR 122
SRSR + R+ R + S+S R++ RSRSR R R R SR R+ SR+
Sbjct: 1775 SRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTS 1834
Query: 123 SRSRH-RHRTRSRSRTRSRSR------DRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMD 175
SR R R RT SR RSRSR R + P RS SRTP R R+
Sbjct: 1835 SRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSP 1894
Query: 176 AQEALARRLERAKKLQEQREKEMVEKQKQQ 205
+R + + + V +++ +
Sbjct: 1895 VSRRRSRSRTSVTRRRSRSRASPVSRRRSR 1924
Score = 70.1 bits (170), Expect = 3e-12
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 45/294 (15%)
Query: 3 RTNFFLKQGRRH----ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKER 58
RT+ ++GR K S+ + + +S R S R + + R
Sbjct: 1832 RTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSR 1891
Query: 59 KSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRER------KKSRSR---SRERKKSRS- 108
S R SRSR+ R RSRSR SR RSR R ++SRSR +R R +SR+
Sbjct: 1892 TSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTP 1951
Query: 109 -----RSRER-----KRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFS--- 155
RSR R +RR RSR+ +R R R+R+ TR RSR R + + R S
Sbjct: 1952 PVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTS 2011
Query: 156 -----RSLSRTP--------SPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEK- 201
RS SRTP S P R + RR R++ + R K + +
Sbjct: 2012 PVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRS 2071
Query: 202 ----QKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAET 251
+++ +++ S A SG++ P +++M+ +++ T
Sbjct: 2072 PPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPT 2125
Score = 69.7 bits (169), Expect = 4e-12
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 10/184 (5%)
Query: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLNSSENG-EDRHKRKERKSSRGRSHSRSRSRERR 75
K + S++ +S + + S R R + S + E K + + R S R+++ RR
Sbjct: 1700 KARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRR 1759
Query: 76 HRSRS---RERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTR 132
RS S R ++SRSRSR K +R R+R S S+S R+R+ RSRSRSR R R
Sbjct: 1760 GRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGS-SQSTSRRRQ-RSRSRSRVTRRRRGG 1817
Query: 133 SRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQE 192
S +RS +R R RR R SRT PP R R+ + + R RA
Sbjct: 1818 SGYHSRSPARQESSRTSSRRR--RGRSRT--PPTSRKRSRSRTSPAPWKRSRSRASPATH 1873
Query: 193 QREK 196
+R +
Sbjct: 1874 RRSR 1877
Score = 69.3 bits (168), Expect = 5e-12
Identities = 64/200 (32%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH----SR 68
R ES SS++ + S + R R + + R + R RS SR
Sbjct: 1827 RQESSRTSSRRRRGRSRTPPT-SRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISR 1885
Query: 69 SRSRER-----RHRSRSRE---RKKSRSRSR--ERKKSRSRSR--ERKKSRSRSRERKRR 116
RSR R R RSRSR R++SRSR+ R++SRSR+ R++SRSR+ +RR
Sbjct: 1886 RRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRR 1945
Query: 117 IRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDA 176
RSR+ +R R R+R+ TR RSR R I + R SR+ + P R R+ + +
Sbjct: 1946 SRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRR------SRSRTSPVTRRRSRSRTS 1999
Query: 177 QEALARRLERAKKLQEQREK 196
R R + +R +
Sbjct: 2000 PVTRRRSRSRTSPVTRRRSR 2019
Score = 65.9 bits (159), Expect = 6e-11
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++ R + S+ + + S R + S R + + R +R SR
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSR 682
Query: 69 SRSRERRHRSRSRERKKSRSRSR---ERKKSRSRSRERKKSRSRSRERKRRIR-SRSRSR 124
SR+ RR RSRSR ++ RSRSR R +S SR+ +R+ S ERK + R S+ RSR
Sbjct: 683 SRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSR 742
Query: 125 SR----------HRHRTRSRSRTRSRSRDR--------------KKRIEKPRRFSRSLSR 160
S R+RS S RS+++ R K++ + P R SRS S
Sbjct: 743 SNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSS 802
Query: 161 TPS----PPPFRGRNTA 173
P PP R R+++
Sbjct: 803 QPKAKSRTPPRRSRSSS 819
Score = 65.5 bits (158), Expect = 8e-11
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 44 NSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRER 103
+SS + + K+K++K RGR S R R +S +++ +S S S++RK + +
Sbjct: 178 SSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSK 237
Query: 104 KKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPS 163
+KS+ + R+R R +SR HR + + + SR R + + R+PS
Sbjct: 238 RKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPS 297
Query: 164 P 164
P
Sbjct: 298 P 298
Score = 64.7 bits (156), Expect = 1e-10
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RR S+ ++ + + + +GR R + G R + R RGRSHSR+
Sbjct: 665 RRGRSRSRTPARRSGRSRS--RTPARRGRSRSRTPRRGRSRSRSLVR---RGRSHSRTPQ 719
Query: 72 R--------ERRHRSRSRERKKSRSRSRERKKSR-----SRSRERKKSRSRSRERKRRIR 118
R ER+++SR+ +R+ + S E KKSR SRS +S+++SR RR
Sbjct: 720 RRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSL 779
Query: 119 SRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQE 178
S S + + +T R R+RS S K + P R SRS S SPPP + T
Sbjct: 780 SGSSPCPKQKSQTPPR-RSRSGSSQPKAKSRTPPRRSRSSS---SPPPKQKSKTPSRQSH 835
Query: 179 ALARRLERAKKLQEQREKEMVEKQKQQE 206
+ + + K R+ + Q ++
Sbjct: 836 SSSSPHPKVKSGTPPRQGSITSPQANEQ 863
Score = 60.5 bits (145), Expect = 2e-09
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGR---ERLNSSENGEDRHKRKERKSSRGRSH 66
Q S + + ++ + SS KGR +SS H K R + RG
Sbjct: 1615 QSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRS 1674
Query: 67 S-----RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRS 121
S +SR+ RR SRS ++R R +S S S E +RSR+ R RR S S
Sbjct: 1675 SPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPE---TRSRTPPRHRRSPSVS 1731
Query: 122 ------RSRSRHRHRTRSRSRTRSRSRDRKKRIEKPR--RFSRSLSRTPSPPPFRGRNTA 173
+SRS R R+ S RT++ SR + KPR + SRS SR R R+ +
Sbjct: 1732 SPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRS 1791
Query: 174 MDAQEALARRLERAKKLQEQREKEMVEKQKQ 204
+Q RR Q R + V ++++
Sbjct: 1792 GSSQSTSRRR-------QRSRSRSRVTRRRR 1815
Score = 58.9 bits (141), Expect = 7e-09
Identities = 69/209 (33%), Positives = 94/209 (44%), Gaps = 35/209 (16%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDK------GRERLNSSENGEDRHKRKERKSS 61
L Q ES S + K H S K ++SS ++R ++
Sbjct: 412 LPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNR---SHGRAK 468
Query: 62 RGRSHSRSRSRERRHRSRS-RERKKSRSRSRE-RKKSRSRSRERKKSRSRSRERKRRIRS 119
R +SHS + SR R RSRS K+ RSRSR K+ SRSR + RSRS +R R RS
Sbjct: 469 RDKSHSHTPSR-RMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRS 527
Query: 120 RSRSRSRHRHRTRSRSRTR---SRSRDRKKR-IEKPRRFSRSLSRTPS--------PPPF 167
R R RSRS R SRSR+ ++R + R RS SR+P+ P
Sbjct: 528 PQR-------RGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPAR 580
Query: 168 RGRNTAMDAQEALARRLERAKKLQEQREK 196
RGR+ + ARR R++ +R +
Sbjct: 581 RGRSRS----RTPARRRSRSRTPTRRRSR 605
Score = 57.4 bits (137), Expect = 2e-08
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH-SRSRSRERR 75
++ SS + + + K+ D+GR +SS +R+ +KSS+ + H S S S++R+
Sbjct: 175 RESSSSRSPTPKQKKKKKKKDRGRRSESSSP------RRERKKSSKKKKHRSESESKKRK 228
Query: 76 HRS-----RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
HRS + + + K R RSR + R + + + S RSRSRS + H
Sbjct: 229 HRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHT 288
Query: 131 TRSRSRTRSRSRDRKKRIEKP 151
T R+ S + R+ + P
Sbjct: 289 TALAGRSPSPASGRRGEGDAP 309
Score = 54.7 bits (130), Expect = 1e-07
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 7 FLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH 66
F Q R E+K + + K + SS + + +DR +R E S R
Sbjct: 151 FDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERK 210
Query: 67 SRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 126
S+ ++ R S S++RK + ++KS+ + R+R +S + + + +R RS S +
Sbjct: 211 KSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSAS 270
Query: 127 HRHRTRSRSRT 137
+RSRSR+
Sbjct: 271 SSDTSRSRSRS 281
Score = 52.4 bits (124), Expect = 7e-07
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 21 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRS 80
++ H+ E N+K++ ERL ++ D + + R+ + + S
Sbjct: 119 TETHQLAELNEKKN------ERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYS 172
Query: 81 RERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSR 140
R+ S SRS K+ + + ++ + RS S RR R +S + +HR + S+ R
Sbjct: 173 LVRESSSSRSPTPKQKKKKKKKDRGRRSESSS-PRRERKKSSKKKKHRSESESKKRKHRS 231
Query: 141 SRDRKKRIEKPRRFSRSLSRTPSPPPFRG-RNTAMDA 176
+ KR K ++ RS S TP+P R R+T+ D+
Sbjct: 232 PTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADS 268
Score = 50.4 bits (119), Expect = 3e-06
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 3 RTNFFLKQGRRHE-SKDKSSKKHKSEEHNDKEHSSDKGRERLNSS-ENGEDR-HKRKERK 59
R+ +++GR H + + + S E +K +S + R R NSS E + R R+ R
Sbjct: 703 RSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQR-RSRSNSSPEMKKSRISSRRSRS 761
Query: 60 SSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRS 119
S RS ++SR RR S S K +S++ R +SRS S + K ++SR RR RS
Sbjct: 762 LSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPR-RSRSGSSQPK---AKSRTPPRRSRS 817
Query: 120 RSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRR 153
S + + +T SR S S K + P R
Sbjct: 818 SSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPR 851
Score = 48.5 bits (114), Expect = 1e-05
Identities = 48/174 (27%), Positives = 68/174 (39%), Gaps = 23/174 (13%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 69
+GRR ES ++ KS + K S + ++R + S + + K K++K R RS + +
Sbjct: 196 RGRRSESSSPRRERKKSSKKK-KHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPA 254
Query: 70 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERK------KSRSRSRERKRR------- 116
R HRS S + S SR SRSRS K RS S RR
Sbjct: 255 PKSRRAHRSTSADSASSSDTSR----SRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPF 310
Query: 117 ----IRSRSRSRSRHRHRTRSRSRTRSRSRDRK-KRIEKPRRFSRSLSRTPSPP 165
S R S + S + +D+K K +P S P PP
Sbjct: 311 SEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPP 364
Score = 45.8 bits (107), Expect = 6e-05
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 33/209 (15%)
Query: 21 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH----SRSRSRERRH 76
S+ S+E + K +S + R +SS + + + + R+ SR S S+SR RR
Sbjct: 1537 SRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRS 1596
Query: 77 RSRSRERKKSRSRSRERKKSRSRSRERKK----------SRSRSRERKR----------- 115
RS S K + R+ R +S S S K SRS S + R
Sbjct: 1597 RSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTE 1656
Query: 116 --------RIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPF 167
+R SRS +T+SR+ R RS + + R SR S P
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPET 1716
Query: 168 RGRNTAMDAQEALARRLERAKKLQEQREK 196
R R + E A+K + R +
Sbjct: 1717 RSRTPPRHRRSPSVSSPEPAEKSRSSRRR 1745
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Query: 40 RERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRE---RKKSRSRSRERKKS 96
R SS + E + + R S G S R +S +S SR + K ++ R++S
Sbjct: 870 RSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRS 929
Query: 97 RSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSR 156
S S SR SR RR RS S + S + S S D K + E P R S
Sbjct: 930 HSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSH 989
Query: 157 SLSRTPSP 164
S S +P P
Sbjct: 990 SGSISPYP 997
Score = 40.8 bits (94), Expect = 0.002
Identities = 54/210 (25%), Positives = 80/210 (38%), Gaps = 48/210 (22%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSS--DKGRERLN-------SSENGEDRHKRKERKS 60
Q R + KK + + SS K + RL+ SS + + + R+S
Sbjct: 738 QRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRS 797
Query: 61 SRGRSHSRSRSRE--RRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIR 118
G S +++SR RR RS S K +S++ R+ S S S K +S + R+ I
Sbjct: 798 RSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQ-SHSSSSPHPKVKSGTPPRQGSIT 856
Query: 119 S------------------------RSRSRSRHRHRTRSRSRTRSRSRDRK--------- 145
S +SR+ SRH S R +S + R+
Sbjct: 857 SPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQ 916
Query: 146 ---KRIEKPRRFSRSLSRTPSPPPFRGRNT 172
K I PR+ S S S +PSP R T
Sbjct: 917 PKVKAIISPRQRSHSGSSSPSPSRVTSRTT 946
Score = 40.0 bits (92), Expect = 0.003
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSEN---GEDRHKRKERKSSRGRS 65
++GR S ++ +K S+ + S + + R++S + R K K R S R RS
Sbjct: 720 RRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLR-RS 778
Query: 66 HSRS------RSRERRHRSRS-RERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIR 118
S S +S+ RSRS + K++SR+ R +SRS S K +S++ R+
Sbjct: 779 LSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPR-RSRSSSSPPPKQKSKTPSRQSHSS 837
Query: 119 SRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRS-----LSRTPS 163
S + + R S T ++ ++ ++ F S SRTPS
Sbjct: 838 SSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPS 887
Score = 39.7 bits (91), Expect = 0.004
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 21 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR-------SRSRE 73
S+ S E N+K + RER S + + + + R RS S S S +
Sbjct: 1497 SRSPSSPELNNKCLTPQ--RERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQ 1554
Query: 74 RRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRS 133
R S S K+++R+ R++SRS S S+SR R+ R S + + R R+
Sbjct: 1555 ERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRA 1614
Query: 134 RSRTRSRSRDR----KKRIEKPRRFSRSLSRTPSP 164
+S + S + + + R S S R PSP
Sbjct: 1615 QSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSP 1649
Score = 37.0 bits (84), Expect = 0.029
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
R S+ SS + K+ + S LN+ R + S ++ +R+
Sbjct: 1475 RGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLG 1534
Query: 73 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTR 132
+R S+E S S + ++S S S K+++R+ +R RSRS S ++
Sbjct: 1535 QRSRSGSSQELDVKPSASPQ-ERSESDSSPDSKAKTRT-----PLRQRSRSGSSPEVDSK 1588
Query: 133 SR-SRTRSRSRDRKKRIEKPRRFSRSLSRTPSPP 165
SR S RSRS + +KPR R+ S + S P
Sbjct: 1589 SRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSP 1622
Score = 36.6 bits (83), Expect = 0.038
Identities = 37/163 (22%), Positives = 54/163 (33%), Gaps = 8/163 (4%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+++GR E K+ S + SS +SS + SS S
Sbjct: 2590 VREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSP 2649
Query: 68 RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSR---ERKRRI-----RS 119
+ + KK R + R + SRS S ER+R R
Sbjct: 2650 SPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRD 2709
Query: 120 RSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP 162
+ S S R R +RS S R++ PR SR+P
Sbjct: 2710 QQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752
Score = 35.8 bits (81), Expect = 0.064
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
Query: 54 KRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER 113
K + SS S ++ RH S S E K ++ S S++RS R
Sbjct: 411 KLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPT----SKNRSHGR 466
Query: 114 KRRIRSRSRSRSRHRHRTRSRS---RTRSRSRDRKKRIEKPRRFSRSLSRTP 162
+R +S S + SR R+RS + R RSRSR KR S SR+P
Sbjct: 467 AKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKR-------GHSRSRSP 511
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 93.2 bits (230), Expect = 3e-19
Identities = 66/173 (38%), Positives = 88/173 (50%), Gaps = 26/173 (15%)
Query: 59 KSSRGRSHSRSRSRERRHRSRSRER-KKSRSRSRERKKSRSRSRERKKS----RSRSRER 113
K R HSRSRSR RR R+ S R ++SRSRSR R S+SRSR R KS RS SRER
Sbjct: 241 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER 300
Query: 114 KRRIRSRSRSRSR--------------------HRHRTRSRSRTRSRSRDRKKRIEKPRR 153
RR RS S++R + R R+ SR R R RSR + +KPR
Sbjct: 301 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS 360
Query: 154 FSRSLSRTPSPPPF-RGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQ 205
R LSR+PSP + + D + + R K ++ ++KE ++K +
Sbjct: 361 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE 413
Score = 84.0 bits (206), Expect = 2e-16
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
RR SK +S ++ KS + HS ++GR ++S+ + + + KE+K R ++ +S S
Sbjct: 275 RRSHSKSRSRRRSKSPRRR-RSHSRERGRRSRSTSKTRDKKKEDKEKK--RSKTPPKSYS 331
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRS----RSRERKRRIRSRSRSRSRH 127
RR RS SRER++ RSRS R + RS +RK SRS R ++ K++ + + RSR
Sbjct: 332 TARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDER 391
Query: 128 RHRTRSRSRTRSRSRDRKKRIEKPR 152
T + +++ + +DR+++ E +
Sbjct: 392 ERSTSKKKKSKDKEKDRERKSESDK 416
Score = 81.6 bits (200), Expect = 1e-15
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++ RRH S++ ++ + S + R R +S + R +R+ + R RSHSR
Sbjct: 243 EEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHS----KSRSRRRSKSPRRRRSHSR 298
Query: 69 SRSRERRHRSRSRERKKS---RSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRS 125
R R R S++R++KK + RS+ KS S +R +SRS SRER+RR RSRS +RS
Sbjct: 299 ERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTAR---RSRSASRERRRR-RSRSGTRS 354
Query: 126 RHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLE 185
+ R+ R +RS S R K+ EK + + SR + + D ++ R+ E
Sbjct: 355 PKKPRSPKRKLSRSPSPRRHKK-EKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE 413
Query: 186 RAKKLQ-------EQREKEMVEKQKQQE 206
K ++ E+ + EK+K++E
Sbjct: 414 SDKDVKQVTRDYDEEEQGYDSEKEKKEE 441
Score = 59.3 bits (142), Expect = 5e-09
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 42 RLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSR 101
+LN G K SS+ + R RE + + + R +SRSRSR
Sbjct: 197 KLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSR 256
Query: 102 ERKKSRSRSRERKRRIRSRSRSRSRHRHRTRS---------------RSRTRSRSRDRKK 146
R+++ S SR R+ R RSR RS S+ R R RS RSR+ S++RD+KK
Sbjct: 257 -RRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKK 315
Query: 147 R------------------------IEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALAR 182
E+ RR SRS +R+P P R ++ R
Sbjct: 316 EDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKL---SRSPSPR 372
Query: 183 RLERAKKLQEQREKEMVEKQK 203
R ++ KK + +E+ E+++
Sbjct: 373 RHKKEKKKDKDKERSRDERER 393
Score = 50.1 bits (118), Expect = 3e-06
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 85 KSRSRSRERKKSRSRSRERKKSRSRSRE--RKRRIRSRSRSRSRHRHRTRSRSRTRSRSR 142
KS + S+E +++ R RE + S + E +K R SRSRSR R R S RSR
Sbjct: 211 KSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSR 270
Query: 143 DRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQ 202
R +R R S+S SR S P R R+ + + R R++ + R+K+ +K+
Sbjct: 271 SRSRR----RSHSKSRSRRRSKSPRRRRSHSRE-------RGRRSRSTSKTRDKKKEDKE 319
Query: 203 KQQ 205
K++
Sbjct: 320 KKR 322
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 92.8 bits (229), Expect = 4e-19
Identities = 78/221 (35%), Positives = 107/221 (48%), Gaps = 50/221 (22%)
Query: 7 FLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH 66
F+K HE SKK+K+ + +KE D +S + R K E KS + S
Sbjct: 1793 FVKVKDTHEK----SKKNKNRDKGEKEKKRD------SSLRSRSKRSKSSEHKSRKRTSE 1842
Query: 67 SRSRSRER-----------RHRSRSRERK---KSRSRSRERK-----------KSRSRSR 101
SRSR+R+R R RSRSR R+ +SRS+SR R+ K RS+SR
Sbjct: 1843 SRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSR 1902
Query: 102 ERKKSRSRSRERKRRIRSRSRSRSR--------HRHRTRSRSRTRS-------RSRDRKK 146
ERK+ RS SR+ ++ +R+RSR+ SR R R+RS R RS RSR +
Sbjct: 1903 ERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR 1962
Query: 147 RIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERA 187
R P R SR+ SR P R R + ++ RR R+
Sbjct: 1963 RSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRS 2003
Score = 87.8 bits (216), Expect = 1e-17
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 34/279 (12%)
Query: 2 IRTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSS 61
+R+ + H+S+ ++S+ + S + + R S R+ R+SS
Sbjct: 1822 LRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRS-------RSRRRRRSS 1874
Query: 62 RGRSHSRSR---SRERR-----HRSRSRERKKSRSRSRERKKS-RSRSR-ERKKSRSRSR 111
R RS SR R S+E+R HRS+SRERK+ RS SR+ +K+ R+RSR ++SRS +
Sbjct: 1875 RSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTP 1934
Query: 112 ERKRRIRSRSRSRS-----RHRHRTRS-RSRTRS-RSRDRKKRIEKPRRFSRSLSRTPSP 164
R+RR RS R RS R RT S RSRT S RSR +R P R SR+ SR
Sbjct: 1935 SRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1994
Query: 165 PPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALL 224
P R R+ ++ + + + R ++ + + +++ + ++ G S + L
Sbjct: 1995 PSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLTDL- 2053
Query: 225 ASGTQVTPQIAMAAQMAALQAKAL-AETGIAVPSYYNPA 262
A ++A A A+ A+ G+ +P PA
Sbjct: 2054 --------DKAQLLEIAKANAAAMCAKAGVPLPPNLKPA 2084
Score = 81.3 bits (199), Expect = 1e-15
Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 16 SKDKSSKKHKSEEHNDKEH--SSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRE 73
S + + + SEE +D E E+ ++N + K K+R SS RS+S E
Sbjct: 1774 SMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSE 1833
Query: 74 RRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR--------- 124
+ R R+ E +SR+R R K RS+ R +SRSR R R R RS+SR R
Sbjct: 1834 HKSRKRTSE-SRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRK 1892
Query: 125 --SRHRHRTRSRSRTRSRSRDRKKRIEKPRR--FSRSLSRTPS 163
+HR ++R R R RS SRD +K + R RS S TPS
Sbjct: 1893 RSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPS 1935
Score = 75.1 bits (183), Expect = 1e-13
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 33 EHSSDKGRERLNSSE---NGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSR 89
E +S+ E + E +D H++ ++ +R + + + R+ RSRS+ K S +
Sbjct: 1777 ERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGE-KEKKRDSSLRSRSKRSKSSEHK 1835
Query: 90 SRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR-HRTRSRSRTRSRSRDRKKRI 148
SR+R S SRSR RK+S S+S+ + + RSRSRSR R R R+RS+SR R RS ++KR
Sbjct: 1836 SRKRT-SESRSRARKRS-SKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGR-RSVSKEKRK 1892
Query: 149 EKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIA 208
P+ S+S R R + A+ R R+ +R V +++ I+
Sbjct: 1893 RSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSIS 1952
Score = 66.6 bits (161), Expect = 3e-11
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 43 LNSSENGEDRHKRKERKSSRGRSHSRSRSRER-----------RHRSRSRERKKSRSRSR 91
L +S+ G DR SS S S S E+ H + + + +
Sbjct: 1756 LLASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKE 1815
Query: 92 ERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKP 151
+++ S RSR ++ S + RKR SRSR+R R RS+TRSRSR R++
Sbjct: 1816 KKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRR----- 1870
Query: 152 RRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAA 211
RR SRS S++ RGR + ++E R + K +E++ K + ++ + A +
Sbjct: 1871 RRSSRSRSKS------RGRRSV--SKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARS 1922
Query: 212 AT 213
T
Sbjct: 1923 RT 1924
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 92.8 bits (229), Expect = 4e-19
Identities = 78/221 (35%), Positives = 107/221 (48%), Gaps = 50/221 (22%)
Query: 7 FLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH 66
F+K HE SKK+K+ + +KE D +S + R K E KS + S
Sbjct: 1793 FVKVKDTHEK----SKKNKNRDKGEKEKKRD------SSLRSRSKRSKSSEHKSRKRTSE 1842
Query: 67 SRSRSRER-----------RHRSRSRERK---KSRSRSRERK-----------KSRSRSR 101
SRSR+R+R R RSRSR R+ +SRS+SR R+ K RS+SR
Sbjct: 1843 SRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSR 1902
Query: 102 ERKKSRSRSRERKRRIRSRSRSRSR--------HRHRTRSRSRTRS-------RSRDRKK 146
ERK+ RS SR+ ++ +R+RSR+ SR R R+RS R RS RSR +
Sbjct: 1903 ERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR 1962
Query: 147 RIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERA 187
R P R SR+ SR P R R + ++ RR R+
Sbjct: 1963 RSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRS 2003
Score = 87.8 bits (216), Expect = 1e-17
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 34/279 (12%)
Query: 2 IRTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSS 61
+R+ + H+S+ ++S+ + S + + R S R+ R+SS
Sbjct: 1822 LRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRS-------RSRRRRRSS 1874
Query: 62 RGRSHSRSR---SRERR-----HRSRSRERKKSRSRSRERKKS-RSRSR-ERKKSRSRSR 111
R RS SR R S+E+R HRS+SRERK+ RS SR+ +K+ R+RSR ++SRS +
Sbjct: 1875 RSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTP 1934
Query: 112 ERKRRIRSRSRSRS-----RHRHRTRS-RSRTRS-RSRDRKKRIEKPRRFSRSLSRTPSP 164
R+RR RS R RS R RT S RSRT S RSR +R P R SR+ SR
Sbjct: 1935 SRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1994
Query: 165 PPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALL 224
P R R+ ++ + + + R ++ + + +++ + ++ G S + L
Sbjct: 1995 PSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLTDL- 2053
Query: 225 ASGTQVTPQIAMAAQMAALQAKAL-AETGIAVPSYYNPA 262
A ++A A A+ A+ G+ +P PA
Sbjct: 2054 --------DKAQLLEIAKANAAAMCAKAGVPLPPNLKPA 2084
Score = 81.3 bits (199), Expect = 1e-15
Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 16 SKDKSSKKHKSEEHNDKEH--SSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRE 73
S + + + SEE +D E E+ ++N + K K+R SS RS+S E
Sbjct: 1774 SMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSE 1833
Query: 74 RRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR--------- 124
+ R R+ E +SR+R R K RS+ R +SRSR R R R RS+SR R
Sbjct: 1834 HKSRKRTSE-SRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRK 1892
Query: 125 --SRHRHRTRSRSRTRSRSRDRKKRIEKPRR--FSRSLSRTPS 163
+HR ++R R R RS SRD +K + R RS S TPS
Sbjct: 1893 RSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPS 1935
Score = 75.1 bits (183), Expect = 1e-13
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 33 EHSSDKGRERLNSSE---NGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSR 89
E +S+ E + E +D H++ ++ +R + + + R+ RSRS+ K S +
Sbjct: 1777 ERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGE-KEKKRDSSLRSRSKRSKSSEHK 1835
Query: 90 SRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR-HRTRSRSRTRSRSRDRKKRI 148
SR+R S SRSR RK+S S+S+ + + RSRSRSR R R R+RS+SR R RS ++KR
Sbjct: 1836 SRKRT-SESRSRARKRS-SKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGR-RSVSKEKRK 1892
Query: 149 EKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIA 208
P+ S+S R R + A+ R R+ +R V +++ I+
Sbjct: 1893 RSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSIS 1952
Score = 66.6 bits (161), Expect = 3e-11
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 43 LNSSENGEDRHKRKERKSSRGRSHSRSRSRER-----------RHRSRSRERKKSRSRSR 91
L +S+ G DR SS S S S E+ H + + + +
Sbjct: 1756 LLASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKE 1815
Query: 92 ERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKP 151
+++ S RSR ++ S + RKR SRSR+R R RS+TRSRSR R++
Sbjct: 1816 KKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRR----- 1870
Query: 152 RRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAA 211
RR SRS S++ RGR + ++E R + K +E++ K + ++ + A +
Sbjct: 1871 RRSSRSRSKS------RGRRSV--SKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARS 1922
Query: 212 AT 213
T
Sbjct: 1923 RT 1924
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 92.4 bits (228), Expect = 6e-19
Identities = 75/235 (31%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 11 GRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRG-RSHSRS 69
GRR ++ S+ + ++H + SS R S + G + + K R SR + S S
Sbjct: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
Query: 70 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
R RRHRS S SR R R R +SR R + + RSRS+ R RR RSR R RS R
Sbjct: 62 YDRRRRHRSSSSSSYGSR-RKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 120
Query: 130 RTRS---RSRTRSRSRDRKKRIEKPRRFS----------RSLSRTPSPPPFRGRNTAMDA 176
RS R+R+RSR R+R+K +K +R ++ R S G A
Sbjct: 121 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
Query: 177 QEALARR---LERAKKLQE-----QREKEMVEKQKQQEIAAAAATGGSVLNVAAL 223
++A AR LE A K E +R +E +++K+++ A V + A+
Sbjct: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAI 235
Score = 50.4 bits (119), Expect = 3e-06
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 27/235 (11%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKG---RERLNSSENGEDRHKRKERKSSRGRSHSR 68
RR + SS + S + S +G R + + S++ R + + R S RS R
Sbjct: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER 123
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
S R R RSR RER+K R + + RE++K + + +E R S +
Sbjct: 124 SSHRRTRSRSRDRERRKGRDKEK---------REKEKDKGKDKELHNIKRGESGNIKAGL 174
Query: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK 188
+ ++R + + K ++ R + + Q L +++R K
Sbjct: 175 EHLPPAEQAKARLQLVLEAAAKADEALKAKERNEE----EAKRRKEEDQATLVEQVKRVK 230
Query: 189 KLQE-----------QREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTP 232
+++ + KE+ + + E+ A +T G VA ++ ++ P
Sbjct: 231 EIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDP 285
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 92.4 bits (228), Expect = 6e-19
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 32/233 (13%)
Query: 3 RTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSR 62
R N K+ + H+S K ++ E +DK + K R + S +++ K KER S
Sbjct: 418 RKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKH 477
Query: 63 GRSHS---RSRSRERRHRSRSRERKKSRSRSRERKKSRSR-------SRERKKSRSRSRE 112
R+ RSRS+ R H + + K+S S+ +++++SRS+ S+ + S+S+E
Sbjct: 478 NRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKE 537
Query: 113 RKRRIRSRSRSR--SRHRHRTRSRSRTRSRSRDRKKRI--------------------EK 150
+ RR +SRSR ++ +H SR+R RSRSRDR +R+ ++
Sbjct: 538 KDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQE 597
Query: 151 PRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQK 203
RR RS SR PP R R+ + +R ER + ++K ++ K
Sbjct: 598 YRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESK 650
Score = 89.0 bits (219), Expect = 6e-18
Identities = 75/226 (33%), Positives = 109/226 (48%), Gaps = 44/226 (19%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEH----SSDKGRERLNSSEN---GEDRHKRKERKSS 61
K R +SK+KS K + +HN E S KGR+ N E + + K +ER S
Sbjct: 457 KSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRS 516
Query: 62 RGRS-----------HSRSRSRERRHRSRSRE------------RKKSRSRSRER-KKSR 97
+ +S HS+S+ ++RR +SRSRE R + RSRSR+R ++ R
Sbjct: 517 KEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVR 576
Query: 98 SRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRS 157
SR+ +R +SRS+ R R R R RSR R R RSRS+DR++R RR SRS
Sbjct: 577 SRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPG--RSRSKDRRRR----RRDSRS 630
Query: 158 LSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQK 203
R S R ++ + + + R E + + EK M K +
Sbjct: 631 SEREESQS--RNKDKYRNQESKSSHRKENS-----ESEKRMYSKSR 669
Score = 82.4 bits (202), Expect = 6e-16
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 9 KQGRRHESKDKSSK-KHKSEEHNDKEHSSDKGRERLNSSENGE---DRHKRKERKSSRGR 64
K R SK+KS + + KS EH +HS K ++R S + E + K +R R
Sbjct: 509 KDQERSRSKEKSKQLESKSNEH---DHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRER 565
Query: 65 SHSRSRSRERRHRSRSRERKKSRS--RSRE---RKKSRSRSRERKKSRSRSRERKRRIRS 119
S SR RSR R R+ R+R +S+ R RE R++ RSRSRER+ RSR + RR R
Sbjct: 566 SRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRR-RR 624
Query: 120 RSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEA 179
R SRS R ++SR++ + R+++ K K S + S R N++ +++E
Sbjct: 625 RRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKS----RDHNSSNNSREK 680
Query: 180 LARR----LERAKKLQEQRE-KEMVEKQKQQE 206
A R + K+ + E K + K K+ E
Sbjct: 681 KADRDQSPFSKIKQSSQDNELKSSMLKNKEDE 712
Score = 68.9 bits (167), Expect = 7e-12
Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 70/381 (18%)
Query: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGR---ERLNSSENGEDRHKRKERKSSRGRSH 66
Q R S ++ K KSE + KE+ R ++ N + RK K + + H
Sbjct: 370 QRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDH 429
Query: 67 SRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERK------RRIRSR 120
+S S+ER R S + K +++ ++R KS+SRS+ ++KS+S+ R+ K +R+RSR
Sbjct: 430 -KSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSR 488
Query: 121 SRSR-------------SRHRHRTRSRSR-------TRSRSRDRKKRIEKPRRF---SRS 157
S+ R S+ + + RSRS+ ++S D K EK RR SR
Sbjct: 489 SKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRE 548
Query: 158 LSRTPSPPPFRGRNTAMDAQEALARRL---------ERAKKLQEQREKEMVEKQKQQEIA 208
T + R +RR+ R+K+ RE+E + + +
Sbjct: 549 CDITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRE 608
Query: 209 AAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMK 268
G S + + + + +++ Q++ Y N + + +
Sbjct: 609 RRTPPGRS-------RSKDRRRRRRDSRSSEREESQSR-------NKDKYRNQESKSSHR 654
Query: 269 FAEQEKKRKMLWQGK----------KEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSE 318
E +++M + + K+ D+ QS + K+ ++D +K L E
Sbjct: 655 KENSESEKRMYSKSRDHNSSNNSREKKADRDQSP--FSKIKQSSQDNELKSSMLK--NKE 710
Query: 319 DEAGCSSVDEESYKTLKQQEE 339
DE SSV++E+ K+ Q+ +
Sbjct: 711 DEKIRSSVEKENQKSKGQEND 731
Score = 58.5 bits (140), Expect = 9e-09
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 33/184 (17%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++ +RH+S SS + + SS + +++E + K+K RK+SR +
Sbjct: 186 EEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSR-KHKKE 244
Query: 69 SRSRERRHRSRSRE-----------------------------RKKSRSRSRERKKSRSR 99
+ R++ +S S E RK + +K+R R
Sbjct: 245 KKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERKNRER 304
Query: 100 SRERKKSRSRSRE---RKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSR 156
RER+ + S+ ++R + +RS + + R R R+ +RSRSRDR +R E P + +
Sbjct: 305 ERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPSRSRSRDRFRRSETPPHWRQ 364
Query: 157 SLSR 160
+ R
Sbjct: 365 EMQR 368
Score = 57.0 bits (136), Expect = 3e-08
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 74
E + K+ ++ + E N + RL + +G K K R R R+ SRSRSR+R
Sbjct: 296 EKERKNRERERERECNPPNSQPASYQRRLLVTRSGR---KIKGRGPRRYRTPSRSRSRDR 352
Query: 75 RHRSRS---------------------------------RERKKSRSRSRERK------- 94
RS + +E ++S R +ERK
Sbjct: 353 FRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERKITDHRNV 412
Query: 95 -KSRSRSRERKKS----RSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIE 149
+S +R E++K +S S+ER R S + +++ + R++S++RS+S+++ K E
Sbjct: 413 SESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKE 472
Query: 150 KPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
+ + +R+ + R R+ D + + + K ++Q EK KQ E
Sbjct: 473 RDSKHNRNEEKR-----MRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLE 524
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/207 (19%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEH-SSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS- 69
RR+ + +S + + H + R + +GE K + + + + + RS
Sbjct: 339 RRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSP 398
Query: 70 -RSRERR---HRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERK------RRIRS 119
R +ER+ HR+ S + + ++ K +S S+ER R+ ++ K +R +S
Sbjct: 399 VRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKS 458
Query: 120 RSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEA 179
+SRS+S+ + +++ R +R+ +++ R R ++ +G++ +
Sbjct: 459 KSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKD------QE 512
Query: 180 LARRLERAKKLQEQREKEMVEKQKQQE 206
+R E++K+L+ + + K K+++
Sbjct: 513 RSRSKEKSKQLESKSNEHDHSKSKEKD 539
Score = 50.8 bits (120), Expect = 2e-06
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKE--RKSSRGRSHSRSR 70
R S+ K +++ +E+ + S + R +DR +R+ R S R S SR++
Sbjct: 582 RDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNK 641
Query: 71 SRERRHRSRSRERKKSRSRSRERKKSRSR-------SRERKKSRSRSRERKRRIRSR--- 120
+ R S+S RK++ S S +R S+SR SRE+K R +S K + S+
Sbjct: 642 DKYRNQESKSSHRKEN-SESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNE 700
Query: 121 ---SRSRSRHRHRTRS---RSRTRSRSRDRKKRIEKPRRFSRSLS 159
S +++ + RS + +S+ ++ EK ++F S
Sbjct: 701 LKSSMLKNKEDEKIRSSVEKENQKSKGQENDHVHEKNKKFDHESS 745
Score = 46.6 bits (109), Expect = 4e-05
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 3 RTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSR 62
R + ++GR + ++ + + + ER S +D+++ +E KSS
Sbjct: 594 REQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSH 653
Query: 63 GRSHSRS------RSRERRHRSRSRERKKSRSRSRERK-KSRSRSRERKKSRSRSRERKR 115
+ +S S +SR+ + SRE+K R +S K K S+ E K S +++E
Sbjct: 654 RKENSESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKE-DE 712
Query: 116 RIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIE 149
+IRS S + +S+ + ++ K+ +
Sbjct: 713 KIRS-----SVEKENQKSKGQENDHVHEKNKKFD 741
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 92.0 bits (227), Expect = 8e-19
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 21 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKR---KERKSSRGRSHSRSRSRERRHR 77
SK H + E + D+ RER ++ DR K ++R S R R R R+RER
Sbjct: 3 SKTEGRHTHTETE-TMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRER--- 58
Query: 78 SRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRI-RSRSRSRSRHRHRTRSRSR 136
R RER+K R ER++ R R R+R++ R R+++R R R R + + R R
Sbjct: 59 DRDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMER 118
Query: 137 TRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQ-EALARRLERAKKLQEQRE 195
R R R+++K + + R+ R R R R T + + E R ER +K + +R+
Sbjct: 119 VRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERK 178
Query: 196 KEMVEKQKQQEI 207
+E E+++ ++
Sbjct: 179 RETKERERHTDM 190
Score = 85.1 bits (209), Expect = 9e-17
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++ RR +++ K E E + RER + +R K+ +R+ R R R
Sbjct: 21 RERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERER 80
Query: 69 SRSRERR-HRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR---RIRSRSRSR 124
R R+R R R +ER+ R +R++ + + RE ++ R R RE+++ R R R
Sbjct: 81 DRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRET 140
Query: 125 SRHRHRTRSRSRTRSRSR---DRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALA 181
R R R R R R R DR + E+ R+ R R R R+T M+ +
Sbjct: 141 DRERERQAERERETGRERKTEDRHRERERERKRERERKRETKE---RERHTDMERE---- 193
Query: 182 RRLERAKKLQEQREKE 197
R+ E +K QRE E
Sbjct: 194 RQRETDRKRDRQRESE 209
Score = 81.6 bits (200), Expect = 1e-15
Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 13 RHESKDKSSKKHKSEEHN-----DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
R + D+ ++ + E + + E DK RE +E +R K+KER+ R R
Sbjct: 64 REKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDRE 123
Query: 68 RSRSRER-RHRSRSRERKKSRSRSRER-------KKSRSRSRERKKSRSRSRERKRRIRS 119
R + +E R R RE + R R ER +K+ R RER++ R R RERKR
Sbjct: 124 REKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKR---- 179
Query: 120 RSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPR 152
++ R RH R R R R RDR++ E+ R
Sbjct: 180 ETKERERHTDMERERQRETDRKRDRQRESERER 212
Score = 79.0 bits (193), Expect = 7e-15
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R+ E++ + K+ +++ H + + K +ER E DR + K+++ R R R
Sbjct: 84 RQRETERERDKERETDRHTETDRERQKQKER--EMERVRDREREKQKEMGRERQTDRETD 141
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 131
RER R RER+ R R E + R R RERK+ R R RE K R R R R R
Sbjct: 142 RERE-RQAERERETGRERKTE-DRHRERERERKRERERKRETKERERHTDMERERQRETD 199
Query: 132 RSRSRTRSRSRDR 144
R R R R R+R
Sbjct: 200 RKRDRQRESERER 212
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 92.0 bits (227), Expect = 8e-19
Identities = 68/161 (42%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR---SHSRSRS 71
E +D+ K+K +E D E +D + L++SE ED +K+K + SR + SHSRS S
Sbjct: 158 EDEDEDLSKYKLDEDED-EDDADLSKYNLDASEE-EDSNKKKSNRRSRSKSRSSHSRSSS 215
Query: 72 R-----ERRHRSRSRERKKSRSRSRERKKSRSRSRER-KKSRSRSRE-------RKRRIR 118
R R RSRSR R S S+SR R SR RSR R KSRS SR RKR
Sbjct: 216 RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYS 275
Query: 119 SRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLS 159
S S S R+R R+RSRS + + R+ R P R RS S
Sbjct: 276 SSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSS 316
Score = 81.6 bits (200), Expect = 1e-15
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
K RR SK +SS S + S + R R SS + + R + R+ SR R S+
Sbjct: 197 KSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRG-SK 255
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
SRS R HR S RK+S S S S R+R+R +SRS S +++ R+RSRS R
Sbjct: 256 SRSSSRSHRGSSSPRKRSYSSS---SSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRH 312
Query: 129 HRTRSRSRTRSRSRDRKK 146
+ S + SRS +KK
Sbjct: 313 RSSSGSSHSGSRSSSKKK 330
Score = 64.7 bits (156), Expect = 1e-10
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 26/200 (13%)
Query: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH 76
K+ K+ + EE ++ E D + +L+ E+ +D K + S + RR
Sbjct: 146 KEVEDKESEGEEEDEDE---DLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRS 202
Query: 77 RSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSR 136
RS+SR S SRS R S S SR R R SRSRS S + R+RS SR
Sbjct: 203 RSKSRS-------------SHSRSSSRSSSPSSSRSRSR---SRSRSSSSSQSRSRSSSR 246
Query: 137 TRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREK 196
RSRSR K R S S S S P + ++ + R+ R++ K
Sbjct: 247 ERSRSRGSKSR-------SSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRK 299
Query: 197 EMVEKQKQQEIAAAAATGGS 216
+ + + E +++G S
Sbjct: 300 KRRTRSRSPERRHRSSSGSS 319
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 90.5 bits (223), Expect = 2e-18
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSH----S 67
R+ E K KK K E + K RE+ ++R KRK+ K R R
Sbjct: 54 RKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRE 113
Query: 68 RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSR-SRSRSR 126
R + +ER+ R R ++++ R R + RKK R + R+R+K R + RERKR+ R + R + R
Sbjct: 114 RKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGK-RERKRKKRKKEEREKKR 172
Query: 127 HRHR-TRSRSRTRSRSRDRKKRIEKPRR 153
R+R R + R R R+RKK +K RR
Sbjct: 173 ERNRKERKKERERKERRERKKERKKERR 200
Score = 90.5 bits (223), Expect = 2e-18
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHK-RKERKSSRGRSHS 67
K+ ++ E + +K K E KE + R+R + E + + R+ERK + R
Sbjct: 64 KKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKER 123
Query: 68 RSRSRERRHRSRSRERKKSRSRSRERKKSR-SRSRERKKSRSRSRERKRRIRSRSRSRSR 126
+++RR R R + RKK R + R+R+K R R R+RKK + RE+KR + R + R
Sbjct: 124 ERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKER 183
Query: 127 HRHRTRSRSRTRSRSRDRKKRIEKPRRFSR 156
R R R + R + R +KK +K R+ R
Sbjct: 184 ERKERRERKKERKKERRKKKERKKDRKTDR 213
Score = 89.4 bits (220), Expect = 5e-18
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
++G+ E K K +K + E + K +++ + G K+K+ + R R + +
Sbjct: 70 ERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQ 129
Query: 69 SRSRERRHRSRSRERKKSRSRSRER-KKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRH 127
R R+R+ R R ++R+K R R +ER K+ R R + +K+ R + RER R+ R + R R
Sbjct: 130 RRERKRKKR-RKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKER 188
Query: 128 RHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSR 160
R R + R + R + ++RKK + R+ + R
Sbjct: 189 RERKKERKKERRKKKERKKDRKTDRQTDSQVFR 221
Score = 88.6 bits (218), Expect = 8e-18
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R+ E +++ +K + E+ +E + ++R E KRKER+ R R
Sbjct: 36 RKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQR----KERRE 91
Query: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 131
+ERR R + +++++ + R R +K + +ER++ + RERKR+ R R + R + R R
Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKR-RKKKRRKERKRE 150
Query: 132 RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQ 191
+ R + R R RKKR ++ R R +R + R + +E R+ ER K+ +
Sbjct: 151 KERGK---RERKRKKRKKEEREKKRERNR-------KERKKERERKERRERKKERKKERR 200
Query: 192 EQREKEMVEKQKQQ 205
+++E++ K +Q
Sbjct: 201 KKKERKKDRKTDRQ 214
Score = 86.7 bits (213), Expect = 3e-17
Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 27 EEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKS 86
E KE + R+R E +R K++++K + R + RER+ + R ++RK+
Sbjct: 33 ESERKKERREREKRKREREKERKRERGKKEKKKRKK---RERGKERERKRKEREKQRKER 89
Query: 87 RSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKK 146
R + R ++K + RERK+ R R++K+ + R R + R R R + R + R ++RK+
Sbjct: 90 REKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKR 149
Query: 147 RIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQ 204
E+ +R + R + + ++ R+ R +K + ++E+ +++K+
Sbjct: 150 EKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKK 207
Score = 86.3 bits (212), Expect = 4e-17
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRER-----LNSSENGEDRHKRKERKSSRG 63
K+ R E + + +K + E KE K RER E + R +R+E++ +
Sbjct: 38 KERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKR 97
Query: 64 RSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 123
+ + R R++R R +++K+ + R RE K+ R R R++++ + R +ERKR R
Sbjct: 98 KKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRE 157
Query: 124 RSRHRHRTRSRSRTRSRSR-DRKKRIEKPRRFSRSLSR 160
R R + + R + R R+R +RKK E+ R R R
Sbjct: 158 RKRKKRKKEEREKKRERNRKERKKERERKERRERKKER 195
Score = 83.6 bits (205), Expect = 3e-16
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 46 SENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSR-ERKKSRS--RSRE 102
SE ++R +R++RK R + R R ++ + + + RER K R R R ER+K R R +E
Sbjct: 34 SERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKE 93
Query: 103 RKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP 162
R+K + ++R+R+ R R + + + R R + R R RKKR +K RR R +
Sbjct: 94 RRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKER 153
Query: 163 SPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 206
R R + R R ++ +E+ KE E++K+++
Sbjct: 154 GKRE-RKRKKRKKEEREKKRERNRKERKKERERKERRERKKERK 196
Score = 65.5 bits (158), Expect = 8e-11
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGR------ERLNSSENGEDRHKRKERKSS- 61
++GRR K K K+ + E +E K R ER E G+ KRK+RK
Sbjct: 108 QRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEE 167
Query: 62 RGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRS 121
R + R+R ++ R R R++ + R +ER+K + R ++RK R + R +R +
Sbjct: 168 REKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLRESA 227
Query: 122 RSR 124
+R
Sbjct: 228 FNR 230
Score = 63.5 bits (153), Expect = 3e-10
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 79 RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR 138
R ERKK R +RK+ R + R+R++ + ++RK+R R + R R R + + R
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE 91
Query: 139 SRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEM 198
R RKK +K R R + R + R+ R KK +++R++E
Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREK 151
Query: 199 VEKQKQQE 206
+++++
Sbjct: 152 ERGKRERK 159
Score = 62.0 bits (149), Expect = 8e-10
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 78 SRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRT 137
S S K R ERKK R +RK+ R + R+R+R + + + + R R + R R R
Sbjct: 21 SCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKR- 79
Query: 138 RSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKE 197
+ R + RK+R EK RR R + RGR +E R E ++ + +R+K
Sbjct: 80 KEREKQRKERREKERR-KRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKR 138
Query: 198 MVEKQKQQ 205
+K++++
Sbjct: 139 RKKKRRKE 146
Score = 61.6 bits (148), Expect = 1e-09
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRER-------KKSRSRSRERKRRIRSRS 121
S+ +R R +ER++ R RER+K R RER +K R R +ER+R+ + R
Sbjct: 26 SKPCTQRESERKKERREREKRKREREKE--RKRERGKKEKKKRKKRERGKERERKRKERE 83
Query: 122 RSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALA 181
+ R R + R + + + R+RK+R + R+ + R R +
Sbjct: 84 KQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKE-------RERENKQRRERKRK 136
Query: 182 RRLERAKKLQEQREKEMVEKQKQQE 206
+R ++ ++ + +REKE +++++++
Sbjct: 137 KRRKKKRRKERKREKERGKRERKRK 161
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 90.1 bits (222), Expect = 3e-18
Identities = 75/174 (43%), Positives = 92/174 (52%), Gaps = 30/174 (17%)
Query: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR---SHSRSRS 71
E +D+ K+K +E D E +D + L++SE ED +K+K + SR + SHSRS S
Sbjct: 158 EDEDEDLSKYKLDEDED-EDDADLSKYNLDASEE-EDSNKKKSNRRSRSKSRSSHSRSSS 215
Query: 72 R-----ERRHRSRSRERKKSRSRSRERKKSRSRSRER-KKSRSRSRE-------RKRRIR 118
R R RSRSR R S S+SR R SR RSR R KSRS SR RKR
Sbjct: 216 RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYS 275
Query: 119 SRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNT 172
S S S R+R R+RSRS S S DRKKR R+ SR+P G NT
Sbjct: 276 SSSSSPERNRKRSRSRS---SSSGDRKKR--------RTRSRSPESQVI-GENT 317
Score = 72.4 bits (176), Expect = 6e-13
Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
K RR SK +SS S + S + R R SS + + R + R+ SR R S+
Sbjct: 197 KSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRG-SK 255
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRS 125
SRS R HR S RK+S S S S S R RK+SRSRS R + R+RSRS
Sbjct: 256 SRSSSRSHRGSSSPRKRSYSSS-----SSSPERNRKRSRSRSSSSGDRKKRRTRSRS 307
Score = 66.2 bits (160), Expect = 4e-11
Identities = 60/196 (30%), Positives = 83/196 (42%), Gaps = 30/196 (15%)
Query: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH 76
K+ K+ + EE ++ E D + +L+ E+ +D K + S + RR
Sbjct: 146 KEVEDKESEGEEEDEDE---DLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRS 202
Query: 77 RSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSR 136
RS+SR S SRS R S S SR R R SRSRS S + R+RS SR
Sbjct: 203 RSKSRS-------------SHSRSSSRSSSPSSSRSRSR---SRSRSSSSSQSRSRSSSR 246
Query: 137 TRSRSRDRKKR--------IEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK 188
RSRSR K R PR+ S S S S P R R + + R +R
Sbjct: 247 ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSS---SSSPERNRKRSRSRSSSSGDRKKRRT 303
Query: 189 KLQEQREKEMVEKQKQ 204
+ + + + E KQ
Sbjct: 304 RSRSPESQVIGENTKQ 319
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 89.7 bits (221), Expect = 4e-18
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 2 IRTNFFLKQGRRHESKDKSSKKHKSEEHND-KEHSSDKGRERLNSSENGEDRHKRKERKS 60
+R++ + + R S+ + + H+ + HS K + + + G + +
Sbjct: 302 VRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSK 361
Query: 61 SRGRSHSRSRSRERRHRSRSRERKKS-RSRSRERKKSRSRSRERKKSRSRSRERKR---R 116
R SHSRS S+ER HR S RK+S RS+S K R SR R +++R R R R +
Sbjct: 362 ERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYK 421
Query: 117 IRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDA 176
R RSRSRS ++ R SRSR+ ++RDR + + S SR+P+ R R+ + +
Sbjct: 422 ARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRS-PS 480
Query: 177 QEALARRLERAKKLQEQREKEMVEKQKQ 204
+E +L K ++ R K++Q
Sbjct: 481 KERDHSQLGSPSKERDHRRSRSPSKERQ 508
Score = 89.7 bits (221), Expect = 4e-18
Identities = 63/163 (38%), Positives = 97/163 (59%), Gaps = 19/163 (11%)
Query: 14 HESKDKSSKKHKSEEHNDKEHSS-DKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
++++D+S + S+E + + S K R+ S ++R R+ R SS+ R H RSRS
Sbjct: 468 NKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRS- 526
Query: 73 ERRHRSRSRERKKSRSRSRERKKSRSRS----RERKKSRSRSRERKRRIRSRSRSRSRHR 128
S+ R+R++SRS ++ER +S+SRS RE ++SRS S+ER RR R RS S+ R R
Sbjct: 527 ----PSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRR-RWRSPSKERER 581
Query: 129 HRTRS----RSRTRSRSRDRKKRIEKPRRFSR----SLSRTPS 163
++RS R +RSRS +++ +PR S+ S SRTPS
Sbjct: 582 RQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPS 624
Score = 88.2 bits (217), Expect = 1e-17
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 10 QGRRH---ESKDKSSKKHKSEEHN-DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRS 65
Q R H +S+++S + HN + S ++ SS D + GRS
Sbjct: 331 QSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRS 390
Query: 66 HSRSRSRERRH-RSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR---RIRSRS 121
S S +++R H RSRS + + RSRSR K+R RSR R +++R R R + R RS
Sbjct: 391 QSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRS 450
Query: 122 RSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRG-RNTAMDAQEAL 180
RSRS ++ R SRSR+ +++RDR R P + R S+ SP R R + ++E
Sbjct: 451 RSRSPNKARDHSRSRSPNKARDR-SRSRSPSK-ERDHSQLGSPSKERDHRRSRSPSKERQ 508
Query: 181 ARRLERAKKLQEQREKEMVEKQKQQ 205
R+ + K ++ R K++Q+
Sbjct: 509 CRQSRSSSKERDHRRSRSPSKERQR 533
Score = 86.7 bits (213), Expect = 3e-17
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
R+ + +S +K +H+ + S +K R+R S + R + + R ++ R SRSRS
Sbjct: 384 RKESGRSQSGSPNKQRDHS-RSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRS 442
Query: 72 RER-RHRSRSRERKKSR--SRSRERKKSRSRSRERKKSRSR--------SRERKRRIRSR 120
+ R RSRSR K+R SRSR K+R RSR R S+ R S+ER R RSR
Sbjct: 443 PYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHR-RSR 501
Query: 121 SRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEAL 180
S S+ R ++RS S+ R R R E+ RR SRS ++ R + + +++
Sbjct: 502 SPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSR 561
Query: 181 ARRLERAKKLQEQREKEMVEKQKQ 204
+ ER ++ KE +Q +
Sbjct: 562 SPSKERDRRRWRSPSKERERRQSR 585
Score = 83.2 bits (204), Expect = 4e-16
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
R S+ +S K + + + + + R R S D + + +R RS SRS S+
Sbjct: 423 RDRSRSRSPNKARDCSRSRSPYKA-RDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSK 481
Query: 73 ERRHR-----SRSRERKKSRSRSRER--KKSRSRSRER--KKSRSRSRERKRR------- 116
ER H S+ R+ ++SRS S+ER ++SRS S+ER ++SRS S+ER+RR
Sbjct: 482 ERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNK 541
Query: 117 IRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDA 176
R RS+SRS R +SR+ S+ RDR++ + R SR+ S R+ + +
Sbjct: 542 ERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNK 601
Query: 177 QEALARRLERAKKLQEQREK 196
Q +R +K+ R +
Sbjct: 602 QSGYSRPRASSKEKAHSRSR 621
Score = 82.4 bits (202), Expect = 6e-16
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 19 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR--SRSRERRH 76
+S +K+ + + + S +K R+ S + R + + R S+ R HS+ S S+ER H
Sbjct: 439 RSRSPYKARDRS-RSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDH 497
Query: 77 R-----SRSRERKKSRSRSRER--KKSRSRSRERKKSRSRSRERKR-RIRSRSRSRSRHR 128
R S+ R+ ++SRS S+ER ++SRS S+ER++ +SRS ++R R +SRS S R
Sbjct: 498 RRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREH 557
Query: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK 188
++RS S+ R R R R E+ RR SRS S R N A E+A
Sbjct: 558 RQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAH 617
Query: 189 KLQEQREKE 197
KE
Sbjct: 618 SRSRTPSKE 626
Score = 78.6 bits (192), Expect = 9e-15
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 38/202 (18%)
Query: 16 SKDKSSKKHKS---EEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSS--RGRSHSRSR 70
SK++ ++ +S E + SS K R+ S ++R +R+ R + R RS SRS
Sbjct: 492 SKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSP 551
Query: 71 SRERRHR-------SRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER---------- 113
S ER HR R R R +S S+ RER++SRS S ER SRSRS +
Sbjct: 552 SEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRAS 611
Query: 114 -KRRIRSRSRSRSRHRHRTRSRSRTR---------------SRSRDRKKRIEKPRRFSRS 157
K + SRSR+ S+ + ++SR+ ++ RS R + + R S++
Sbjct: 612 SKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKT 671
Query: 158 LSRTPSPPPFRGRNTAMDAQEA 179
S +PS P G+ + D +A
Sbjct: 672 SSHSPSTFPSGGQTLSQDDSQA 693
Score = 69.3 bits (168), Expect = 5e-12
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 20 SSKKHKSEEH-----NDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 74
SS+K KS +K +S + R+ S R + + SR SRS S++R
Sbjct: 238 SSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKR 297
Query: 75 RH---RSRSRERKKSRSRSRERK--------KSRSRSRERKKSRSRSRERKRRIRSRSRS 123
H RS S +R SR+RSR RK S+SRS + KS+++SR RR RS + S
Sbjct: 298 THSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSR-TPRRGRSHNWS 356
Query: 124 RSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP--------SPPPFRGRNTAMD 175
R+ + R+ S SR+ S+ RD + + RS S +P S P + R+ +
Sbjct: 357 RNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRS 416
Query: 176 AQEALARRLERAKKLQEQRE 195
AR R++ + R+
Sbjct: 417 RSPYKARDRSRSRSPNKARD 436
Score = 69.3 bits (168), Expect = 5e-12
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKS--------SRGR 64
R +S +S +S + K S R R +S + R + + RK S+ R
Sbjct: 277 RPQSHSQSRSPRRSRSGSQKRTHS---RVRSHSWKRNHSRARSRTRKGILSQMGRHSQSR 333
Query: 65 SHSRSRSRE-----RRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR---- 115
SHS+ +S+ RR RS + R S+ RS +S S+ R+ + S S +E R
Sbjct: 334 SHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSG 393
Query: 116 ---RIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNT 172
+ R SRSRS ++ R RSRSR+ ++RDR R P + +R SR+ S P++ R+
Sbjct: 394 SPNKQRDHSRSRSPNKARDRSRSRSPYKARDR-SRSRSPNK-ARDCSRSRS--PYKARDR 449
Query: 173 AMDAQEALARRLERAKKLQEQREK 196
+ AR R++ + R++
Sbjct: 450 SRSRSPNKARDHSRSRSPNKARDR 473
Score = 57.8 bits (138), Expect = 2e-08
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 46 SENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKK 105
S+N RK + + SR +S S SR + +++ +R R +S S+SR ++
Sbjct: 231 SDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMS-SRVKSYNQASTRSRPQSHSQSRSPRR 289
Query: 106 SRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPP 165
SRS S+ +R SR RS S R+ +R+RSRTR + R + R S+ S+ S
Sbjct: 290 SRSGSQ---KRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRT 346
Query: 166 PFRGRNTAMDAQEALARRLERAKKLQEQRE 195
P RGR+ + R ++ ++R+
Sbjct: 347 PRRGRSHNWSRNPSKERSHSHSRSSSKERD 376
Score = 45.1 bits (105), Expect = 1e-04
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 12/158 (7%)
Query: 5 NFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR 64
N + +K S+K+ S + + K R S D K K+S R
Sbjct: 54 NSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKAR---TPSRVSTDTRTSKASKASDVR 110
Query: 65 SHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 124
H R R SR R + SRS +R SR+ + R R+ + + SR R+
Sbjct: 111 CHQR-----RGTHSRGRTPGRRGSRSSKRSPSRAST----PGRIRTHGARPGMASRVRTP 161
Query: 125 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP 162
+ + +R +S R R+ +R++ +PR S+ R P
Sbjct: 162 TSQQKGSRGKSYGRPRTSNRERSDSQPRNLSKKSYRPP 199
Score = 43.1 bits (100), Expect = 4e-04
Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 43 LNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRE 102
L S+++ K + R+ S S + +S S +R S +R +SR RS+
Sbjct: 32 LKSTKSATPNRSLVPTKPATSRNSVMSPSSSKSTKSTSTKRAPS---NRPSSRSRVRSKA 88
Query: 103 RKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP 162
R SR + R + S R R T SR RT R R SRS R+P
Sbjct: 89 RTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTPGR------------RGSRSSKRSP 136
Query: 163 SPPPFRGRNTAMDAQEALARRLERAKKLQE 192
S GR A+ +A R+ Q+
Sbjct: 137 SRASTPGRIRTHGARPGMASRVRTPTSQQK 166
>gi|41393554 LUC7-like isoform b [Homo sapiens]
Length = 371
Score = 88.6 bits (218), Expect = 8e-18
Identities = 55/114 (48%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 40 RERLNSSEN--GEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSR 97
RE+L+ E + KR + + R R RR SR+R+R++SRSR R R++SR
Sbjct: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
Query: 98 SRSRERKK-SRSRSRERKRRIRSRSRSRSR-HRHRTRSRSRTRSRSRDRKKRIE 149
S SRER+K SRSRSR+R RR RSRSRS SR HR +R RS SR+R R E
Sbjct: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYKFSRERASREE 335
Score = 82.0 bits (201), Expect = 8e-16
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
Query: 58 RKSSRGRSHSRSRSRERRHRSRSRERKKSR---SRSRERKKSRSRSRERKKSRSRSRERK 114
RK+ + R++ R RR R RE + SR SR+R+R++SRSR R R++SRS SRER+
Sbjct: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERR 288
Query: 115 RRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSR 156
+ RSRSR R R RHR+RSRS +R R + R K +FSR
Sbjct: 289 KLSRSRSRDRHR-RHRSRSRSHSRGHRRASRDRSAK-YKFSR 328
Score = 60.5 bits (145), Expect = 2e-09
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH 76
K + K+ K + + + ERL+ R +R+ R R R SRS SRERR
Sbjct: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRK 289
Query: 77 RSRSRERKKSRSRSRERKKSRSRSR-ERKKSRSRSRERKRRIRSRSRSRS 125
SRSR R + R R R +SRS SR R+ SR RS + K SR S
Sbjct: 290 LSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRSAKYKFSRERASREES 336
Score = 59.7 bits (143), Expect = 4e-09
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR---S 65
KQ +R++ + + ++ + EE + S + R+R S DR +R+ R +SR R S
Sbjct: 235 KQEKRNQDRLRRREEREREERLSRR-SGSRTRDRRRS--RSRDRRRRRSRSTSRERRKLS 291
Query: 66 HSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRS 125
SRSR R RRHRSRSR + R+ SR RS + K SR R+ + RS
Sbjct: 292 RSRSRDRHRRHRSRSRSHSRG-----HRRASRDRSAKYKFSRERASREESWESGRSERGP 346
Query: 126 RHRHRTRSRSRTRSRSRDRKK 146
S + SR + K+
Sbjct: 347 PDWRLESSNGKMASRRSEEKE 367
Score = 55.8 bits (133), Expect = 6e-08
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLN-----SSENGEDRHKRKERKSSRGRSHS---R 68
K ++ KK EE+ + +S +++L S+ G + R+ G+ H +
Sbjct: 161 KVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQ 220
Query: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
R + + R E+++ R++ R R++ ER RS SR R RR RSRSR R
Sbjct: 221 IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR-----RSRSRDR 275
Query: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPS 163
R RSRS +R R + + R R RS SR+ S
Sbjct: 276 RRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHS 310
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 88.2 bits (217), Expect = 1e-17
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 7/211 (3%)
Query: 8 LKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHS 67
+++ R +++ K+ K E H +K+ +K R+R + R + ++RK R
Sbjct: 57 IRERERQRERERQRKRAK-ERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRD 115
Query: 68 RSRSRER---RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 124
R ER R R R R+R+K R R R+R+ + RE + + R RER+ R R R
Sbjct: 116 RETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDR 175
Query: 125 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRL 184
R R + R R R R R R+K + R R + +R R T D + R
Sbjct: 176 ERERQKQRETRRDRDRERQREK---EDRERDRDRQKEREKDRYRERETGRDRDKERDRER 232
Query: 185 ERAKKLQEQREKEMVEKQKQQEIAAAAATGG 215
+R K Q+ + V + + + A G
Sbjct: 233 QREKDRDRQKAIDCVPGRWEVTVMAVDCVPG 263
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.122 0.325
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,246,852
Number of Sequences: 37866
Number of extensions: 607597
Number of successful extensions: 31716
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 646
Number of HSP's that attempted gapping in prelim test: 6805
Number of HSP's gapped (non-prelim): 8536
length of query: 375
length of database: 18,247,518
effective HSP length: 104
effective length of query: 271
effective length of database: 14,309,454
effective search space: 3877862034
effective search space used: 3877862034
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.