MED16 26775

Name: MED16	Sequence: fasta or formatted (877aa)		NCBI GI: 38146094
Description: mediator complex subunit 16		Referenced in: Nuclear Receptors RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 63 2 C cysteine 3.4 30 2 D aspartate 5.7 50 2 E glutamate 4.3 38 2 F phenylalanine 2.6 23 1 G glycine 5.5 48 3 H histidine 3.2 28 2 I isoleucine 4.0 35 1 K lysine 4.4 39 1 L leucine 14.1 124 2 M methionine 2.5 22 2 N asparagine 1.7 15 2 P proline 6.2 54 1 Q glutamine 3.9 34 2 R arginine 5.5 48 2 S serine 9.5 83 2 T threonine 6.2 54 2 V valine 6.7 59 2 W tryptophan 2.3 20 2 Y tyrosine 1.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mediator complex subunit 16 WDR91 0.008 WD repeat domain 91 TBL1X 0.006 transducin beta-like 1X isoform b TBL1X 0.006 transducin beta-like 1X isoform b TBL1X 0.006 transducin beta-like 1X isoform a TBL1X 0.006 transducin beta-like 1X isoform a WDR20 0.006 WD repeat domain 20 isoform 3 WDR20 0.006 WD repeat domain 20 isoform 4 WDR20 0.006 WD repeat domain 20 isoform 1 WDR20 0.006 WD repeat domain 20 isoform 2 WDHD1 0.006 WD repeat and HMG-box DNA binding protein 1 isoform 1... WDHD1 0.006 WD repeat and HMG-box DNA binding protein 1 isoform ... TBL1Y 0.006 transducin beta-like 1Y TBL1Y 0.006 transducin beta-like 1Y TBL1Y 0.006 transducin beta-like 1Y STRN4 0.006 zinedin isoform 2 STRN4 0.006 zinedin isoform 1 UTP15 0.005 UTP15, U3 small nucleolar ribonucleoprotein, homolog... IFT80 0.005 WD repeat domain 56 WDR17 0.005 WD repeat domain 17 isoform 2 WDR17 0.005 WD repeat domain 17 isoform 1 IFT140 0.005 intraflagellar transport 140 TBL1XR1 0.005 transducin (beta)-like 1 X-linked receptor 1 SEH1L 0.005 sec13-like protein isoform 1 SEH1L 0.005 sec13-like protein isoform 2 KIAA0284 0.005 hypothetical protein LOC283638 isoform 2 KIAA0284 0.005 hypothetical protein LOC283638 isoform 1 WDR1 0.004 WD repeat-containing protein 1 isoform 2 WDR1 0.004 WD repeat-containing protein 1 isoform 1 STXBP5L 0.004 syntaxin binding protein 5-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.