Guide to the Human Genome
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Name: IKZF3 Sequence: fasta or formatted (414aa) NCBI GI: 38045965
Description:

aiolos isoform 5

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [509aa] aiolos isoform 1
alt prot [453aa] aiolos isoform 2
alt prot [470aa] aiolos isoform 3
alt prot [470aa] aiolos isoform 4
alt prot [431aa] aiolos isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         24           2
 C cysteine            2.4         10           1
 D aspartate           5.6         23           2
 E glutamate          10.4         43           2
 F phenylalanine       2.2          9           1
 G glycine             4.3         18           1
 H histidine           4.1         17           1
 I isoleucine          4.3         18           1
 K lysine              5.3         22           2
 L leucine             6.5         27           2
 M methionine          4.8         20           2
 N asparagine          5.8         24           2
 P proline             5.8         24           3
 Q glutamine           2.7         11           2
 R arginine            6.3         26           1
 S serine             10.6         44           2
 T threonine           2.9         12           1
 V valine              6.0         25           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aiolos isoform 5 
IKZF3                 0.977   aiolos isoform 2 
IKZF3                 0.901   aiolos isoform 6 
IKZF3                 0.894   aiolos isoform 3 
IKZF3                 0.886   aiolos isoform 4 
IKZF3                 0.678   aiolos isoform 1 
IKZF1                 0.336   zinc finger protein, subfamily 1A, 1 (Ikaros) 
IKZF2                 0.279   helios isoform 1 
IKZF2                 0.279   helios isoform 2 
IKZF4                 0.237   zinc finger protein, subfamily 1A, 4 
IKZF5                 0.073   zinc finger protein, subfamily 1A, 5 
TRPS1                 0.057   zinc finger transcription factor TRPS1 
RBAK                  0.026   RB-associated KRAB repressor 
ZNF684                0.021   zinc finger protein 684 
ZFP28                 0.020   zinc finger protein 28 
ZNF2                  0.020   zinc finger protein 2 isoform b 
ZNF2                  0.020   zinc finger protein 2 isoform a 
LOC100287163          0.018   PREDICTED: hypothetical protein XP_002343923 
ZNF25                 0.018   zinc finger protein 25 
ZNF717                0.018   zinc finger protein 717 
ZNF607                0.018   zinc finger protein 607 
ZNF329                0.018   zinc finger protein 329 
ZNF180                0.018   zinc finger protein 180 
ZNF569                0.018   zinc finger protein 569 
ZNF568                0.017   zinc finger protein 568 
ZNF814                0.017   zinc finger protein 814 
ZNF836                0.017   zinc finger protein 836 
ZNF600                0.017   zinc finger protein 600 
ATF7IP                0.017   activating transcription factor 7 interacting protei...
ZNF599                0.017   zinc finger protein 599 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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