Guide to the Human Genome
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Name: IKZF3 Sequence: fasta or formatted (470aa) NCBI GI: 38045961
Description:

aiolos isoform 3

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [509aa] aiolos isoform 1
alt prot [453aa] aiolos isoform 2
alt prot [470aa] aiolos isoform 4
alt prot [414aa] aiolos isoform 5
alt prot [431aa] aiolos isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         27           2
 C cysteine            3.2         15           1
 D aspartate           5.1         24           2
 E glutamate           9.6         45           2
 F phenylalanine       2.6         12           1
 G glycine             4.9         23           1
 H histidine           4.7         22           1
 I isoleucine          4.0         19           1
 K lysine              5.5         26           2
 L leucine             7.0         33           2
 M methionine          4.3         20           2
 N asparagine          5.7         27           2
 P proline             5.5         26           3
 Q glutamine           3.2         15           2
 R arginine            6.6         31           2
 S serine              9.8         46           2
 T threonine           3.4         16           1
 V valine              5.3         25           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.8         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aiolos isoform 3 
IKZF3                 0.980   aiolos isoform 1 
IKZF3                 0.912   aiolos isoform 4 
IKZF3                 0.904   aiolos isoform 6 
IKZF3                 0.879   aiolos isoform 2 
IKZF3                 0.624   aiolos isoform 5 
IKZF1                 0.444   zinc finger protein, subfamily 1A, 1 (Ikaros) 
IKZF4                 0.341   zinc finger protein, subfamily 1A, 4 
IKZF2                 0.303   helios isoform 1 
IKZF2                 0.300   helios isoform 2 
ZNF568                0.076   zinc finger protein 568 
MZF1                  0.073   zinc finger protein 42 isoform 2 
MZF1                  0.073   zinc finger protein 42 isoform 1 
ZNF841                0.073   zinc finger protein 841 
ZNF677                0.072   zinc finger protein 677 
ZNF544                0.072   zinc finger protein 544 
ZNF34                 0.071   zinc finger protein 34 
ZNF248                0.071   zinc finger protein 248 
ZNF805                0.071   zinc finger protein 805 isoform 2 
ZNF805                0.071   zinc finger protein 805 isoform 1 
ZNF2                  0.071   zinc finger protein 2 isoform b 
ZNF2                  0.071   zinc finger protein 2 isoform a 
ZNF322B               0.071   zinc finger protein 322B 
ZNF322A               0.070   zinc finger protein 322A 
ZNF569                0.070   zinc finger protein 569 
LOC388559             0.070   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.070   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.070   PREDICTED: hypothetical protein LOC388559 
ZNF37A                0.070   zinc finger protein 37a 
ZNF37A                0.070   zinc finger protein 37a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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