Guide to the Human Genome
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Name: IKZF3 Sequence: fasta or formatted (431aa) NCBI GI: 38045967
Description:

aiolos isoform 6

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [509aa] aiolos isoform 1
alt prot [453aa] aiolos isoform 2
alt prot [470aa] aiolos isoform 3
alt prot [470aa] aiolos isoform 4
alt prot [414aa] aiolos isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         20           2
 C cysteine            3.5         15           1
 D aspartate           5.3         23           2
 E glutamate           9.7         42           2
 F phenylalanine       2.6         11           1
 G glycine             5.1         22           1
 H histidine           4.9         21           1
 I isoleucine          3.9         17           1
 K lysine              5.1         22           2
 L leucine             7.0         30           2
 M methionine          4.2         18           2
 N asparagine          6.0         26           2
 P proline             5.8         25           3
 Q glutamine           3.2         14           2
 R arginine            6.3         27           2
 S serine              9.5         41           2
 T threonine           3.7         16           1
 V valine              5.3         23           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aiolos isoform 6 
IKZF3                 0.978   aiolos isoform 4 
IKZF3                 0.978   aiolos isoform 3 
IKZF3                 0.908   aiolos isoform 1 
IKZF3                 0.867   aiolos isoform 2 
IKZF3                 0.846   aiolos isoform 5 
IKZF1                 0.304   zinc finger protein, subfamily 1A, 1 (Ikaros) 
IKZF2                 0.262   helios isoform 1 
IKZF2                 0.253   helios isoform 2 
IKZF4                 0.202   zinc finger protein, subfamily 1A, 4 
ZNF568                0.090   zinc finger protein 568 
ZNF677                0.085   zinc finger protein 677 
ZNF544                0.085   zinc finger protein 544 
ZSCAN12               0.085   zinc finger and SCAN domain containing 12 
ZNF841                0.085   zinc finger protein 841 
ZNF34                 0.085   zinc finger protein 34 
ZNF248                0.085   zinc finger protein 248 
ZNF805                0.084   zinc finger protein 805 isoform 2 
ZNF805                0.084   zinc finger protein 805 isoform 1 
ZNF569                0.083   zinc finger protein 569 
LOC388559             0.083   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.083   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.083   PREDICTED: hypothetical protein LOC388559 
ZNF37A                0.083   zinc finger protein 37a 
ZNF37A                0.083   zinc finger protein 37a 
MZF1                  0.083   zinc finger protein 42 isoform 2 
MZF1                  0.083   zinc finger protein 42 isoform 1 
ZNF596                0.083   zinc finger protein 596 
ZNF596                0.083   zinc finger protein 596 
ZNF596                0.083   zinc finger protein 596 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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