Guide to the Human Genome
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Name: IKZF3 Sequence: fasta or formatted (453aa) NCBI GI: 38045959
Description:

aiolos isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [509aa] aiolos isoform 1
alt prot [470aa] aiolos isoform 3
alt prot [470aa] aiolos isoform 4
alt prot [414aa] aiolos isoform 5
alt prot [431aa] aiolos isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         24           2
 C cysteine            2.9         13           1
 D aspartate           5.5         25           2
 E glutamate          10.6         48           2
 F phenylalanine       2.4         11           1
 G glycine             4.4         20           1
 H histidine           4.0         18           1
 I isoleucine          4.0         18           1
 K lysine              5.7         26           2
 L leucine             6.4         29           2
 M methionine          4.4         20           2
 N asparagine          5.3         24           2
 P proline             5.7         26           3
 Q glutamine           2.9         13           2
 R arginine            6.6         30           1
 S serine             10.6         48           2
 T threonine           3.3         15           1
 V valine              5.7         26           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aiolos isoform 2 
IKZF3                 0.962   aiolos isoform 1 
IKZF3                 0.918   aiolos isoform 3 
IKZF3                 0.886   aiolos isoform 5 
IKZF3                 0.837   aiolos isoform 6 
IKZF3                 0.803   aiolos isoform 4 
IKZF1                 0.379   zinc finger protein, subfamily 1A, 1 (Ikaros) 
IKZF2                 0.326   helios isoform 1 
IKZF2                 0.326   helios isoform 2 
IKZF4                 0.272   zinc finger protein, subfamily 1A, 4 
IKZF5                 0.089   zinc finger protein, subfamily 1A, 5 
TRPS1                 0.052   zinc finger transcription factor TRPS1 
ZNF92                 0.044   zinc finger protein 92 isoform 1 
ZNF92                 0.044   zinc finger protein 92 isoform 2 
ZNF568                0.041   zinc finger protein 568 
ZNF782                0.041   zinc finger protein 782 
ZNF90                 0.041   zinc finger protein 90 
ZNF43                 0.041   zinc finger protein 43 
HIVEP1                0.041   human immunodeficiency virus type I enhancer bindin...
LOC100292052          0.039   PREDICTED: similar to hCG1773661 
LOC100287226          0.039   PREDICTED: similar to hCG1773661 
LOC100287226          0.039   PREDICTED: hypothetical protein XP_002343677 
ZNF91                 0.039   zinc finger protein 91 
ZNF323                0.039   zinc finger protein 323 
ZNF323                0.039   zinc finger protein 323 
ZNF323                0.039   zinc finger protein 323 
ZNF323                0.039   zinc finger protein 323 
ZSCAN23               0.039   zinc finger protein 390 
ZFP62                 0.039   zinc finger protein 62 homolog 
ZNF676                0.038   zinc finger protein 676 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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