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Search of human proteins with 37622894
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37622894 ring finger protein 126 [Homo sapiens]
(311 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37622894 ring finger protein 126 [Homo sapiens] 659 0.0
gi|33859668 Rabring 7 [Homo sapiens] 252 3e-67
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 82 6e-16
gi|21539663 praja 1 isoform c [Homo sapiens] 82 6e-16
gi|74048537 praja 1 isoform b [Homo sapiens] 82 6e-16
gi|41281725 praja 1 isoform a [Homo sapiens] 82 6e-16
gi|7706039 ring finger protein 181 [Homo sapiens] 70 2e-12
gi|5174653 ring finger protein 6 [Homo sapiens] 69 7e-12
gi|34305295 ring finger protein 6 [Homo sapiens] 69 7e-12
gi|34305293 ring finger protein 6 [Homo sapiens] 69 7e-12
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 62 8e-10
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 62 8e-10
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 62 8e-10
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 62 8e-10
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 62 8e-10
gi|150378447 zinc and ring finger 3 [Homo sapiens] 60 2e-09
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 59 4e-09
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 59 4e-09
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 59 6e-09
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 59 6e-09
gi|29788758 ring finger protein 130 [Homo sapiens] 59 7e-09
gi|21071001 autocrine motility factor receptor [Homo sapiens] 58 9e-09
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 58 1e-08
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 58 1e-08
gi|58331204 ring finger protein 150 [Homo sapiens] 57 2e-08
gi|7662486 ring finger protein 44 [Homo sapiens] 57 2e-08
gi|150170725 zinc and ring finger 4 [Homo sapiens] 57 2e-08
gi|56711322 ring finger protein 43 [Homo sapiens] 57 3e-08
gi|14149702 ring finger protein 167 [Homo sapiens] 55 6e-08
gi|38045931 ring finger protein 122 [Homo sapiens] 55 6e-08
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 659 bits (1699), Expect = 0.0
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MAEASPHPGRYFCHCCSVEIVPRLPDYICPRCESGFIEELPEETRSTENGSAPSTAPTDQ 60
MAEASPHPGRYFCHCCSVEIVPRLPDYICPRCESGFIEELPEETRSTENGSAPSTAPTDQ
Sbjct: 1 MAEASPHPGRYFCHCCSVEIVPRLPDYICPRCESGFIEELPEETRSTENGSAPSTAPTDQ 60
Query: 61 SRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPSRH 120
SRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPSRH
Sbjct: 61 SRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPSRH 120
Query: 121 RYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPMDYA 180
RYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPMDYA
Sbjct: 121 RYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPMDYA 180
Query: 181 WGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGE 240
WGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGE
Sbjct: 181 WGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGE 240
Query: 241 RVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSS 300
RVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSS
Sbjct: 241 RVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSS 300
Query: 301 SPSNENATSNS 311
SPSNENATSNS
Sbjct: 301 SPSNENATSNS 311
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 252 bits (643), Expect = 3e-67
Identities = 141/306 (46%), Positives = 178/306 (58%), Gaps = 37/306 (12%)
Query: 10 RYFCHCCSVEIVPRLPDYICPRCESGFIEELPEETRSTENGSAPSTAPTDQSRPPL-EHV 68
R+FCH C E+ P+LP+YICPRCESGFIEE+ +++ G + T L H+
Sbjct: 19 RFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGGSRIDNTTTTHFAELWGHL 78
Query: 69 DQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPSRHRY-GARQP 127
D +F F D F P + ER H + + GAR P
Sbjct: 79 DHTMF-------------FQD------FRPFLSSSPLDQDNRANERGHQTHTDFWGARPP 119
Query: 128 RARLTTR---RATGRHEGVPTLEGIIQQLVNGIITPATIP-SLGPW---GVLHSNPMDYA 180
R L R R + R + P +EGI+Q + G + IP S P+ G+LHSNP DYA
Sbjct: 120 RLPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYA 179
Query: 181 WGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGE 240
WG GLDAI+TQLL Q ENTGPPPADKEKI +LPTV VT+E V GLECPVCK+DY + E
Sbjct: 180 WGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEE 239
Query: 241 RVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSS 300
VRQLPCNH FH CIVPWLE HD+CPVCRKSL G+++ S S+ +S+S+
Sbjct: 240 EVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQ---------SQSTEASASN 290
Query: 301 SPSNEN 306
SN++
Sbjct: 291 RFSNDS 296
>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
Length = 708
Score = 82.0 bits (201), Expect = 6e-16
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 203 PPADKEKIQALPTVPVTEEHVGSGLE--CPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260
PPA KE I LP V E+H G E CP+C +Y + +LPC+H FH C+ WL
Sbjct: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
Query: 261 EQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNEN 306
++ +CPVCR+ PP + S + SS + PSN++
Sbjct: 666 QKSGTCPVCRRHF--------PPAVIEASAAPSSEPDPDAPPSNDS 703
>gi|21539663 praja 1 isoform c [Homo sapiens]
Length = 455
Score = 82.0 bits (201), Expect = 6e-16
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 203 PPADKEKIQALPTVPVTEEH--VGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260
PPA KE I ALP + VTE+H VG + CP+C +Y GE +LPC+H FH C+ WL
Sbjct: 379 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 438
Query: 261 EQHDSCPVCR 270
++ +CPVCR
Sbjct: 439 QKSGTCPVCR 448
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 82.0 bits (201), Expect = 6e-16
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 203 PPADKEKIQALPTVPVTEEH--VGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260
PPA KE I ALP + VTE+H VG + CP+C +Y GE +LPC+H FH C+ WL
Sbjct: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571
Query: 261 EQHDSCPVCR 270
++ +CPVCR
Sbjct: 572 QKSGTCPVCR 581
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 82.0 bits (201), Expect = 6e-16
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 203 PPADKEKIQALPTVPVTEEH--VGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260
PPA KE I ALP + VTE+H VG + CP+C +Y GE +LPC+H FH C+ WL
Sbjct: 567 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 626
Query: 261 EQHDSCPVCR 270
++ +CPVCR
Sbjct: 627 QKSGTCPVCR 636
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 70.5 bits (171), Expect = 2e-12
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 184 NGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVR 243
N +D L+ +++ PPPA K ++ LP + + L+CPVC ++ E
Sbjct: 33 NRMDFEDLGLVVDWDHHLPPPAAKTVVENLPRTVIRGSQ--AELKCPVCLLEFEEEETAI 90
Query: 244 QLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
++PC+HLFH CI+PWL + +SCP+CR L
Sbjct: 91 EMPCHHLFHSSCILPWLSKTNSCPLCRYEL 120
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 68.6 bits (166), Expect = 7e-12
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 207 KEKIQALPTVPVTEEHVGS--GLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHD 264
KE+I L T + S G C VC DY G ++RQLPC H FH CI WL ++
Sbjct: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
Query: 265 SCPVCRKSLTGQNTATN 281
+CP+CR+ + G N A N
Sbjct: 668 TCPICRQPVLGSNIANN 684
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 68.6 bits (166), Expect = 7e-12
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 207 KEKIQALPTVPVTEEHVGS--GLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHD 264
KE+I L T + S G C VC DY G ++RQLPC H FH CI WL ++
Sbjct: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
Query: 265 SCPVCRKSLTGQNTATN 281
+CP+CR+ + G N A N
Sbjct: 668 TCPICRQPVLGSNIANN 684
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 68.6 bits (166), Expect = 7e-12
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 207 KEKIQALPTVPVTEEHVGS--GLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHD 264
KE+I L T + S G C VC DY G ++RQLPC H FH CI WL ++
Sbjct: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
Query: 265 SCPVCRKSLTGQNTATN 281
+CP+CR+ + G N A N
Sbjct: 668 TCPICRQPVLGSNIANN 684
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 61.6 bits (148), Expect = 8e-10
Identities = 65/226 (28%), Positives = 85/226 (37%), Gaps = 32/226 (14%)
Query: 58 TDQSRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHP 117
T QSR PL+ ++ + L + F + S PT PP A P D P
Sbjct: 215 TQQSRSPLQRIENEVELLGEHLPVGGF-TYPPSAHPPTLPPSA-------PLQFLTHD-P 265
Query: 118 SRHRYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPM 177
P RR TGR + I P PSL P+ VL P+
Sbjct: 266 LHQEVSFGVPYPPFMPRRLTGRSR---------YRSQQPIPPPPYHPSLLPY-VLSMLPV 315
Query: 178 DYAWGA---------NGLDAIITQLLNQFENTG---PPPADKEKIQALPTVPVT-EEHVG 224
A G +G LLN E G P K I+ LP+ H
Sbjct: 316 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
C VC D+ + +R LPCNH FH C+ WL+ + +CP+CR
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 61.6 bits (148), Expect = 8e-10
Identities = 65/226 (28%), Positives = 85/226 (37%), Gaps = 32/226 (14%)
Query: 58 TDQSRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHP 117
T QSR PL+ ++ + L + F + S PT PP A P D P
Sbjct: 215 TQQSRSPLQRIENEVELLGEHLPVGGF-TYPPSAHPPTLPPSA-------PLQFLTHD-P 265
Query: 118 SRHRYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPM 177
P RR TGR + I P PSL P+ VL P+
Sbjct: 266 LHQEVSFGVPYPPFMPRRLTGRSR---------YRSQQPIPPPPYHPSLLPY-VLSMLPV 315
Query: 178 DYAWGA---------NGLDAIITQLLNQFENTG---PPPADKEKIQALPTVPVT-EEHVG 224
A G +G LLN E G P K I+ LP+ H
Sbjct: 316 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
C VC D+ + +R LPCNH FH C+ WL+ + +CP+CR
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 61.6 bits (148), Expect = 8e-10
Identities = 65/226 (28%), Positives = 85/226 (37%), Gaps = 32/226 (14%)
Query: 58 TDQSRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHP 117
T QSR PL+ ++ + L + F + S PT PP A P D P
Sbjct: 248 TQQSRSPLQRIENEVELLGEHLPVGGF-TYPPSAHPPTLPPSA-------PLQFLTHD-P 298
Query: 118 SRHRYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPM 177
P RR TGR + I P PSL P+ VL P+
Sbjct: 299 LHQEVSFGVPYPPFMPRRLTGRSR---------YRSQQPIPPPPYHPSLLPY-VLSMLPV 348
Query: 178 DYAWGA---------NGLDAIITQLLNQFENTG---PPPADKEKIQALPTVPVT-EEHVG 224
A G +G LLN E G P K I+ LP+ H
Sbjct: 349 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS 408
Query: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
C VC D+ + +R LPCNH FH C+ WL+ + +CP+CR
Sbjct: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 61.6 bits (148), Expect = 8e-10
Identities = 65/226 (28%), Positives = 85/226 (37%), Gaps = 32/226 (14%)
Query: 58 TDQSRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHP 117
T QSR PL+ ++ + L + F + S PT PP A P D P
Sbjct: 215 TQQSRSPLQRIENEVELLGEHLPVGGF-TYPPSAHPPTLPPSA-------PLQFLTHD-P 265
Query: 118 SRHRYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPM 177
P RR TGR + I P PSL P+ VL P+
Sbjct: 266 LHQEVSFGVPYPPFMPRRLTGRSR---------YRSQQPIPPPPYHPSLLPY-VLSMLPV 315
Query: 178 DYAWGA---------NGLDAIITQLLNQFENTG---PPPADKEKIQALPTVPVT-EEHVG 224
A G +G LLN E G P K I+ LP+ H
Sbjct: 316 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
C VC D+ + +R LPCNH FH C+ WL+ + +CP+CR
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 61.6 bits (148), Expect = 8e-10
Identities = 65/226 (28%), Positives = 85/226 (37%), Gaps = 32/226 (14%)
Query: 58 TDQSRPPLEHVDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHP 117
T QSR PL+ ++ + L + F + S PT PP A P D P
Sbjct: 298 TQQSRSPLQRIENEVELLGEHLPVGGF-TYPPSAHPPTLPPSA-------PLQFLTHD-P 348
Query: 118 SRHRYGARQPRARLTTRRATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPM 177
P RR TGR + I P PSL P+ VL P+
Sbjct: 349 LHQEVSFGVPYPPFMPRRLTGRSR---------YRSQQPIPPPPYHPSLLPY-VLSMLPV 398
Query: 178 DYAWGA---------NGLDAIITQLLNQFENTG---PPPADKEKIQALPTVPVT-EEHVG 224
A G +G LLN E G P K I+ LP+ H
Sbjct: 399 PPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS 458
Query: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
C VC D+ + +R LPCNH FH C+ WL+ + +CP+CR
Sbjct: 459 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 60.1 bits (144), Expect = 2e-09
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 228 ECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQ 276
+C +C + Y GE +R +PC H FH C+ PWL QH +CP CR ++ Q
Sbjct: 192 DCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ 240
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 59.3 bits (142), Expect = 4e-09
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 193 LLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFH 252
LLN+ ++ P KE+I L E C VC +Y G ++R+LPC+H +H
Sbjct: 536 LLNEDDDDQPRGLTKEQIDNLAMRSFGENDALK--TCSVCITEYTEGNKLRKLPCSHEYH 593
Query: 253 DGCIVPWLEQHDSCPVCRKSL 273
CI WL ++ +CP+CR+++
Sbjct: 594 VHCIDRWLSENSTCPICRRAV 614
Score = 29.6 bits (65), Expect = 3.6
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 274 TGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
+G +++ + S SSSSSSSSSSSPS+ + +S
Sbjct: 449 SGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESS 486
Score = 29.3 bits (64), Expect = 4.7
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 268 VCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
V +++ + + G G S S SSSSSSSSS S+ +++S+S
Sbjct: 432 VSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSS 475
Score = 28.5 bits (62), Expect = 8.0
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 264 DSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
DS P S A + G G SSS SSSSSS S+ +++S+S
Sbjct: 425 DSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSS 472
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 59.3 bits (142), Expect = 4e-09
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 193 LLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFH 252
LLN+ ++ P KE+I L E C VC +Y G ++R+LPC+H +H
Sbjct: 536 LLNEDDDDQPRGLTKEQIDNLAMRSFGENDALK--TCSVCITEYTEGNKLRKLPCSHEYH 593
Query: 253 DGCIVPWLEQHDSCPVCRKSL 273
CI WL ++ +CP+CR+++
Sbjct: 594 VHCIDRWLSENSTCPICRRAV 614
Score = 29.6 bits (65), Expect = 3.6
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 274 TGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
+G +++ + S SSSSSSSSSSSPS+ + +S
Sbjct: 449 SGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESS 486
Score = 29.3 bits (64), Expect = 4.7
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 268 VCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
V +++ + + G G S S SSSSSSSSS S+ +++S+S
Sbjct: 432 VSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSS 475
Score = 28.5 bits (62), Expect = 8.0
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 264 DSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
DS P S A + G G SSS SSSSSS S+ +++S+S
Sbjct: 425 DSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSS 472
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 58.9 bits (141), Expect = 6e-09
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 187 DAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLP 246
DAI+++ + NT P A E++QA+ V C +C+++ G ++LP
Sbjct: 261 DAIMSRRAIRNMNTLYPDATPEELQAMDNV------------CIICREEMVTG--AKRLP 306
Query: 247 CNHLFHDGCIVPWLEQHDSCPVCRKS-LTGQNTATNPP 283
CNH+FH C+ W ++ +CP CR L A +PP
Sbjct: 307 CNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPP 344
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 58.9 bits (141), Expect = 6e-09
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 187 DAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLP 246
DAI+++ + NT P A E++QA+ V C +C+++ G ++LP
Sbjct: 261 DAIMSRRAIRNMNTLYPDATPEELQAMDNV------------CIICREEMVTG--AKRLP 306
Query: 247 CNHLFHDGCIVPWLEQHDSCPVCRKS-LTGQNTATNPP 283
CNH+FH C+ W ++ +CP CR L A +PP
Sbjct: 307 CNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPP 344
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 58.5 bits (140), Expect = 7e-09
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 229 CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKS-LTGQNTATNPPGLTG 287
C VC + Y + VR LPC H+FH C+ PWL +H +CP+C+ + L N P
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDN 323
Query: 288 VSF 290
V+F
Sbjct: 324 VAF 326
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 58.2 bits (139), Expect = 9e-09
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 210 IQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVC 269
++A V EE + +C +C D + R+LPC HLFH+ C+ WLEQ SCP C
Sbjct: 322 MEARFAVATPEELAVNNDDCAICWDSM---QAARKLPCGHLFHNSCLRSWLEQDTSCPTC 378
Query: 270 RKSL 273
R SL
Sbjct: 379 RMSL 382
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 57.8 bits (138), Expect = 1e-08
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 213 LPTVPVTEEHVG-SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR- 270
L T+ ++ +G G C VC + Y + VR L CNH+FH C+ PWL +H +CP+C+
Sbjct: 260 LRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 319
Query: 271 ---KSLTGQNTATNPPGLTGVSFSSS-SSSSSSSSPSNENATSNS 311
K+L + + V S+ S+S+SS N + T++S
Sbjct: 320 DILKALGIEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASS 364
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 57.8 bits (138), Expect = 1e-08
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 213 LPTVPVTEEHVG-SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR- 270
L T+ ++ +G G C VC + Y + VR L CNH+FH C+ PWL +H +CP+C+
Sbjct: 234 LRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 293
Query: 271 ---KSLTGQNTATNPPGLTGVSFSSS-SSSSSSSSPSNENATSNS 311
K+L + + V S+ S+S+SS N + T++S
Sbjct: 294 DILKALGIEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASS 338
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 57.4 bits (137), Expect = 2e-08
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 229 CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
C VC + Y + VR LPC HLFH C+ PWL H +CP+C+ ++
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 322
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 2e-08
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 193 LLNQFENTG---PPPADKEKIQALPTVPVT-EEHVGSGLECPVCKDDYALGERVRQLPCN 248
LLN E G P K I+ LP+ + H C VC D+ + +R LPCN
Sbjct: 340 LLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCN 399
Query: 249 HLFHDGCIVPWLEQHDSCPVCR 270
H FH C+ WL+ + +CP+CR
Sbjct: 400 HEFHTKCVDKWLKANRTCPICR 421
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 229 CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQ--HDSCPVCRKSLTGQNTATNPPGLT 286
C +C D+Y G++++ LPC+H +H CI PW Q SCPVC++S+ T
Sbjct: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAA----------T 358
Query: 287 GVSFSSSSSSSSSSSPS 303
SF S++ S PS
Sbjct: 359 EDSFDSTTYSFRDEDPS 375
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 56.6 bits (135), Expect = 3e-08
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 211 QALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
QA P + S C +C ++++ G+ +R + C H FH C+ PWL QH +CP+C
Sbjct: 254 QARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCM 313
Query: 271 KSLTGQNTATNPPGLTGVSFSSSSSSSSS 299
++T G SFS S S S
Sbjct: 314 FNIT-----------EGDSFSQSLGPSRS 331
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 55.5 bits (132), Expect = 6e-08
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 211 QALPTVPVTEEHVGSGLE-CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQ-HDSCPV 268
+ L +P + G + C +C D+Y G+++R LPC H +H C+ PWL Q +CP+
Sbjct: 211 EQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPI 270
Query: 269 CRK 271
C++
Sbjct: 271 CKQ 273
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 55.5 bits (132), Expect = 6e-08
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 226 GLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGL 285
G C VC +D+ + + LPC H FH C+V WLE CP+C K + + AT G+
Sbjct: 90 GQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIASPSEATQNIGI 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,467,359
Number of Sequences: 37866
Number of extensions: 829319
Number of successful extensions: 6068
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 5029
Number of HSP's gapped (non-prelim): 732
length of query: 311
length of database: 18,247,518
effective HSP length: 102
effective length of query: 209
effective length of database: 14,385,186
effective search space: 3006503874
effective search space used: 3006503874
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.