Guide to the Human Genome
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Name: NCKIPSD Sequence: fasta or formatted (715aa) NCBI GI: 37577148
Description:

NCK interacting protein with SH3 domain isoform 2

Referenced in:

Receptor Tyrosine Kinases
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [722aa] NCK interacting protein with SH3 domain isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         75           4
 C cysteine            1.8         13           1
 D aspartate           4.9         35           2
 E glutamate           6.7         48           3
 F phenylalanine       2.2         16           1
 G glycine             5.5         39           2
 H histidine           3.8         27           2
 I isoleucine          3.8         27           2
 K lysine              2.8         20           2
 L leucine            12.2         87           5
 M methionine          3.1         22           2
 N asparagine          2.0         14           1
 P proline             6.9         49           4
 Q glutamine           4.3         31           2
 R arginine            6.6         47           2
 S serine              8.8         63           3
 T threonine           5.2         37           2
 V valine              6.3         45           1
 W tryptophan          0.4          3           2
 Y tyrosine            2.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NCK interacting protein with SH3 domain isoform 2 [H... 
NCKIPSD               0.995   NCK interacting protein with SH3 domain isoform 1 [Ho...
SRRM2                 0.021   splicing coactivator subunit SRm300 
FYN                   0.017   protein-tyrosine kinase fyn isoform c 
FYN                   0.017   protein-tyrosine kinase fyn isoform b 
FYN                   0.017   protein-tyrosine kinase fyn isoform a 
TEC                   0.017   tec protein tyrosine kinase 
SRRM1                 0.015   serine/arginine repetitive matrix 1 
ITK                   0.015   IL2-inducible T-cell kinase 
ZC3H18                0.014   zinc finger CCCH-type containing 18 
IRS2                  0.014   insulin receptor substrate 2 
TXK                   0.014   TXK tyrosine kinase 
SRC                   0.014   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.014   proto-oncogene tyrosine-protein kinase SRC 
NAV2                  0.014   neuron navigator 2 isoform 3 
NAV2                  0.014   neuron navigator 2 isoform 1 
NAV2                  0.014   neuron navigator 2 isoform 2 
WASL                  0.014   Wiskott-Aldrich syndrome gene-like protein 
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
MAGEE1                0.014   melanoma antigen family E, 1 
FGR                   0.014   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.014   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.014   proto-oncogene tyrosine-protein kinase FGR 
SFPQ                  0.014   splicing factor proline/glutamine rich (polypyrimidin...
FNBP1L                0.013   formin binding protein 1-like isoform 1 
FNBP1L                0.013   formin binding protein 1-like isoform 2 
DNMBP                 0.013   dynamin binding protein 
PSTPIP1               0.013   proline-serine-threonine phosphatase interacting pro...
SCARF2                0.013   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.013   scavenger receptor class F, member 2 isoform 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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