Guide to the Human Genome
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Name: KLF17 Sequence: fasta or formatted (389aa) NCBI GI: 104294874
Description:

zinc finger protein 393

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         23           2
 C cysteine            2.3          9           2
 D aspartate           2.8         11           1
 E glutamate           6.4         25           1
 F phenylalanine       2.1          8           2
 G glycine             8.0         31           2
 H histidine           3.6         14           1
 I isoleucine          1.8          7           1
 K lysine              1.8          7           1
 L leucine             6.2         24           2
 M methionine          4.4         17           1
 N asparagine          4.6         18           4
 P proline            12.9         50           2
 Q glutamine           7.7         30           2
 R arginine            6.2         24           2
 S serine             11.6         45           4
 T threonine           4.1         16           1
 V valine              4.1         16           1
 W tryptophan          1.0          4           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 393 
KLF4                  0.137   Kruppel-like factor 4 (gut) 
KLF3                  0.136   Kruppel-like factor 3 (basic) 
SP4                   0.131   Sp4 transcription factor 
KLF6                  0.126   Kruppel-like factor 6 isoform A 
KLF2                  0.126   Kruppel-like factor 
KLF5                  0.126   Kruppel-like factor 5 
KLF8                  0.124   Kruppel-like factor 8 isoform 1 
KLF12                 0.123   Kruppel-like factor 12 
KLF10                 0.122   Kruppel-like factor 10 isoform b 
KLF10                 0.122   Kruppel-like factor 10 isoform a 
KLF11                 0.119   Kruppel-like factor 11 
KLF1                  0.118   Kruppel-like factor 1 (erythroid) 
KLF7                  0.118   Kruppel-like factor 7 (ubiquitous) 
WT1                   0.117   Wilms tumor 1 isoform D 
WT1                   0.117   Wilms tumor 1 isoform C 
WT1                   0.117   Wilms tumor 1 isoform B 
WT1                   0.117   Wilms tumor 1 isoform A 
SP7                   0.117   osterix 
SP6                   0.116   Sp6 transcription factor 
KLF16                 0.113   BTE-binding protein 4 
SP1                   0.113   Sp1 transcription factor isoform a 
SP1                   0.113   Sp1 transcription factor isoform b 
KLF15                 0.112   Kruppel-like factor 15 
SP9                   0.112   Sp9 transcription factor homolog 
SP5                   0.111   Sp5 transcription factor 
KLF13                 0.111   Kruppel-like factor 13 
SP8                   0.108   Sp8 transcription factor isoform 1 
SP8                   0.108   Sp8 transcription factor isoform 2 
KLF9                  0.106   Kruppel-like factor 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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