Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 34787409
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34787409 hypothetical protein LOC57148 [Homo sapiens]
(1494 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34787409 hypothetical protein LOC57148 [Homo sapiens] 2996 0.0
gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2... 63 2e-09
gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1... 63 2e-09
gi|118600961 akt substrate AS250 [Homo sapiens] 62 3e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.029
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens] 37 0.19
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 36 0.24
gi|189181750 human immunodeficiency virus type I enhancer bindin... 36 0.24
gi|116089331 human immunodeficiency virus type I enhancer bindin... 36 0.24
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.42
gi|239753480 PREDICTED: hypothetical protein [Homo sapiens] 35 0.42
gi|150170670 piccolo isoform 2 [Homo sapiens] 35 0.42
gi|150378539 piccolo isoform 1 [Homo sapiens] 35 0.42
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 35 0.42
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 35 0.54
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 35 0.54
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 35 0.71
gi|168823443 RAD54-like 2 [Homo sapiens] 35 0.71
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 34 0.93
gi|75677325 kinase suppressor of ras [Homo sapiens] 34 1.2
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 34 1.2
gi|61676089 hypothetical protein LOC222584 [Homo sapiens] 34 1.2
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 33 1.6
gi|116284392 mucin 2 precursor [Homo sapiens] 33 2.1
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 33 2.1
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 33 2.1
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 33 2.1
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 33 2.1
gi|4505507 oligophrenin 1 [Homo sapiens] 33 2.1
gi|91982772 mucin 17 [Homo sapiens] 33 2.1
>gi|34787409 hypothetical protein LOC57148 [Homo sapiens]
Length = 1494
Score = 2996 bits (7768), Expect = 0.0
Identities = 1494/1494 (100%), Positives = 1494/1494 (100%)
Query: 1 MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD 60
MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD
Sbjct: 1 MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD 60
Query: 61 KEVKWTMEVICYGLTLPLDGETVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNQYVQTIL 120
KEVKWTMEVICYGLTLPLDGETVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNQYVQTIL
Sbjct: 61 KEVKWTMEVICYGLTLPLDGETVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNQYVQTIL 120
Query: 121 KHLQNLFVPRQEQGSSQIRLCLQVLRAIQKLARESSLMARETWEVLLLFLLQINDILLAP 180
KHLQNLFVPRQEQGSSQIRLCLQVLRAIQKLARESSLMARETWEVLLLFLLQINDILLAP
Sbjct: 121 KHLQNLFVPRQEQGSSQIRLCLQVLRAIQKLARESSLMARETWEVLLLFLLQINDILLAP 180
Query: 181 PTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKV 240
PTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKV
Sbjct: 181 PTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKV 240
Query: 241 ICALTSRLLRFTYGPSFPAFKVPDEDASLIPPEMDNECVAQTWFRFLHMLSNPVDLSNPA 300
ICALTSRLLRFTYGPSFPAFKVPDEDASLIPPEMDNECVAQTWFRFLHMLSNPVDLSNPA
Sbjct: 241 ICALTSRLLRFTYGPSFPAFKVPDEDASLIPPEMDNECVAQTWFRFLHMLSNPVDLSNPA 300
Query: 301 IISSTPKFQEQFLNVSGMPQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSA 360
IISSTPKFQEQFLNVSGMPQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSA
Sbjct: 301 IISSTPKFQEQFLNVSGMPQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSA 360
Query: 361 PPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLS 420
PPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLS
Sbjct: 361 PPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLS 420
Query: 421 SPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAITTQASM 480
SPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAITTQASM
Sbjct: 421 SPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAITTQASM 480
Query: 481 EFRRKGSQMSTDTMVSNPMFDASEFPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSR 540
EFRRKGSQMSTDTMVSNPMFDASEFPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSR
Sbjct: 481 EFRRKGSQMSTDTMVSNPMFDASEFPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSR 540
Query: 541 FYMLLIQGLQINDYVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSK 600
FYMLLIQGLQINDYVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSK
Sbjct: 541 FYMLLIQGLQINDYVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSK 600
Query: 601 FKSYVNPTELRRSSINILLSLLPLPHHFGTVKSEVVLEGKFSNDDSSSYDKPITFLSLKL 660
FKSYVNPTELRRSSINILLSLLPLPHHFGTVKSEVVLEGKFSNDDSSSYDKPITFLSLKL
Sbjct: 601 FKSYVNPTELRRSSINILLSLLPLPHHFGTVKSEVVLEGKFSNDDSSSYDKPITFLSLKL 660
Query: 661 RLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMEMGGGENNLKSHSRTNS 720
RLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMEMGGGENNLKSHSRTNS
Sbjct: 661 RLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMEMGGGENNLKSHSRTNS 720
Query: 721 GISSASGGSTEPTTPDSERPAQALLRDYALNTDSAAGLLIRSIHLVTQRLNSQWRQDMSI 780
GISSASGGSTEPTTPDSERPAQALLRDYALNTDSAAGLLIRSIHLVTQRLNSQWRQDMSI
Sbjct: 721 GISSASGGSTEPTTPDSERPAQALLRDYALNTDSAAGLLIRSIHLVTQRLNSQWRQDMSI 780
Query: 781 SLAALELLSGLAKVKVMVDSGDRKRAISSVCTYIVYQCSRPAPLHSRDLHSMIVAAFQCL 840
SLAALELLSGLAKVKVMVDSGDRKRAISSVCTYIVYQCSRPAPLHSRDLHSMIVAAFQCL
Sbjct: 781 SLAALELLSGLAKVKVMVDSGDRKRAISSVCTYIVYQCSRPAPLHSRDLHSMIVAAFQCL 840
Query: 841 CVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNNEQEVKYKGDKEPNPASMRVKDAAE 900
CVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNNEQEVKYKGDKEPNPASMRVKDAAE
Sbjct: 841 CVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNNEQEVKYKGDKEPNPASMRVKDAAE 900
Query: 901 ATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLE 960
ATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLE
Sbjct: 901 ATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLE 960
Query: 961 QPLGNEQNDFFPSVTVLVRGMSGRLAWAQQLCLLPRGAKANQKLFVPEPRPVPKNDVGFK 1020
QPLGNEQNDFFPSVTVLVRGMSGRLAWAQQLCLLPRGAKANQKLFVPEPRPVPKNDVGFK
Sbjct: 961 QPLGNEQNDFFPSVTVLVRGMSGRLAWAQQLCLLPRGAKANQKLFVPEPRPVPKNDVGFK 1020
Query: 1021 YSVKHRPFPEEVDKIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYEIHLEQQS 1080
YSVKHRPFPEEVDKIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYEIHLEQQS
Sbjct: 1021 YSVKHRPFPEEVDKIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYEIHLEQQS 1080
Query: 1081 EEELQKRSFPDPVTDCKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDS 1140
EEELQKRSFPDPVTDCKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDS
Sbjct: 1081 EEELQKRSFPDPVTDCKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDS 1140
Query: 1141 TIPGFFDDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRTVQPHFLEFLLSLG 1200
TIPGFFDDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRTVQPHFLEFLLSLG
Sbjct: 1141 TIPGFFDDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRTVQPHFLEFLLSLG 1200
Query: 1201 WSVDVGRHPGWTGHVSTSWSINCCDDGEGSQQEVISSEDIGASIFNGQKKVLYYADALTE 1260
WSVDVGRHPGWTGHVSTSWSINCCDDGEGSQQEVISSEDIGASIFNGQKKVLYYADALTE
Sbjct: 1201 WSVDVGRHPGWTGHVSTSWSINCCDDGEGSQQEVISSEDIGASIFNGQKKVLYYADALTE 1260
Query: 1261 IAFVVPSPVESLTDSLESNISDQDSDSNMDLMPGILKQPSLTLELFPNHTDNLNSSQRLS 1320
IAFVVPSPVESLTDSLESNISDQDSDSNMDLMPGILKQPSLTLELFPNHTDNLNSSQRLS
Sbjct: 1261 IAFVVPSPVESLTDSLESNISDQDSDSNMDLMPGILKQPSLTLELFPNHTDNLNSSQRLS 1320
Query: 1321 PSSRMRKLPQGRPVPPLGPETRVSVVWVERYDDIENFPLSELMTEISTGVETTANSSTSL 1380
PSSRMRKLPQGRPVPPLGPETRVSVVWVERYDDIENFPLSELMTEISTGVETTANSSTSL
Sbjct: 1321 PSSRMRKLPQGRPVPPLGPETRVSVVWVERYDDIENFPLSELMTEISTGVETTANSSTSL 1380
Query: 1381 RSTTLEKEVPVIFIHPLNTGLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVIN 1440
RSTTLEKEVPVIFIHPLNTGLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVIN
Sbjct: 1381 RSTTLEKEVPVIFIHPLNTGLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVIN 1440
Query: 1441 ICRRKRLESDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQEVGLKNCSS 1494
ICRRKRLESDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQEVGLKNCSS
Sbjct: 1441 ICRRKRLESDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQEVGLKNCSS 1494
>gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2
[Homo sapiens]
Length = 2083
Score = 62.8 bits (151), Expect = 2e-09
Identities = 88/380 (23%), Positives = 147/380 (38%), Gaps = 92/380 (24%)
Query: 898 AAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSF-----RYFVLDN 952
AA +T ++ LG +P GPA S V E YS ++ F ++FVL+N
Sbjct: 1505 AARTVITHLVNHLGHYPMSGGPAMLTSQVCENHDNHYSESTELSPELFESPNIQFFVLNN 1564
Query: 953 SVILAMLEQPLGNEQN-----------DFFPSVTVLVRGMSGRLAWAQQLCLLPRGAKAN 1001
+ +++ ++ + +E+N +V ++VR +SG+ +W +
Sbjct: 1565 TTLVSCIQ--IRSEENMPGGGLSAGLASANSNVRIIVRDLSGKYSWDSAI---------- 1612
Query: 1002 QKLFVPEPRPVPKNDVGFKYSVKHRPFPEEVD---------------KIPFVKADLSIPD 1046
L+ P P F S+ H+ PEE + F + ++P
Sbjct: 1613 --LYGPPPVSGLSEPTSFMLSLSHQEKPEEPPTSNECLEDITVKDGLSLQFKRFRETVPT 1670
Query: 1047 LHEIVTEE--LEERHEKL---------RSGMAQQI---------------AYEIHLEQQS 1080
I EE L+E + L R+G++ I L+Q +
Sbjct: 1671 WDTIRDEEDVLDELLQYLGVTSPECLQRTGISLNIPAPQPVCISEKQENDVINAILKQHT 1730
Query: 1081 EE-ELQKRSFPD----PVTDCKPPP--PAQEFQTARLFLSHFGFLSLEALKEPANSRLPP 1133
EE E ++ F D V +P P P F RL LS G S + R
Sbjct: 1731 EEKEFVEKHFNDLNMKAVEQDEPIPQKPQSAFYYCRLLLSILGMNSWD-------KRRSF 1783
Query: 1134 HLIALDSTIPGFFDDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRTVQPHFL 1193
HL+ + + ++ LD CR + +FY+ GQ+ IL N S+ +
Sbjct: 1784 HLLKKNEKL---LRELRNLDSRQCRETHKIAVFYVAEGQEDKHSILTNTGGSQAYE---- 1836
Query: 1194 EFLLSLGWSVDVGRHPGWTG 1213
+F+ LGW V++ H G+ G
Sbjct: 1837 DFVAGLGWEVNLTNHCGFMG 1856
Score = 42.7 bits (99), Expect = 0.003
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 140 LCLQVLRAIQKLARESSLMARETWEVLLLFLLQINDILLAPPT-----VQGGIAENLAEK 194
+C ++L + + + S M ++TWE +LL LL++ + +L P+ QG LA +
Sbjct: 557 MCKRILNIYRYMVVQVS-MDKKTWEQMLLVLLRVTESVLKMPSQAFLQFQGKKNMTLAGR 615
Query: 195 LIGVLFEV----WLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLR 250
L G LF+ W+ A + + W ++++ + + +WS + LT L R
Sbjct: 616 LAGPLFQTLIVAWIKANLNVYISRELWDDLLSVLSSLTYWEELATEWSLTMETLTKVLAR 675
Query: 251 FTY 253
Y
Sbjct: 676 NLY 678
Score = 33.9 bits (76), Expect = 1.2
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 1391 VIFIHPLNTGLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESD 1450
+I I+P+ +F I+I + PL DG IV+ + L +VR T IN R +
Sbjct: 1930 LIVIYPMKNHMFSIQIMKKP-EVPFFGPLFDGAIVNGKVLPIMVRATAINASRALKSLIP 1988
Query: 1451 SYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLF 1484
Y + R + + IV + +F +F
Sbjct: 1989 LYQNFYEERARYLQTIVQHHLEPTTFEDFAAQVF 2022
>gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1
[Homo sapiens]
Length = 2036
Score = 62.8 bits (151), Expect = 2e-09
Identities = 88/380 (23%), Positives = 147/380 (38%), Gaps = 92/380 (24%)
Query: 898 AAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSF-----RYFVLDN 952
AA +T ++ LG +P GPA S V E YS ++ F ++FVL+N
Sbjct: 1505 AARTVITHLVNHLGHYPMSGGPAMLTSQVCENHDNHYSESTELSPELFESPNIQFFVLNN 1564
Query: 953 SVILAMLEQPLGNEQN-----------DFFPSVTVLVRGMSGRLAWAQQLCLLPRGAKAN 1001
+ +++ ++ + +E+N +V ++VR +SG+ +W +
Sbjct: 1565 TTLVSCIQ--IRSEENMPGGGLSAGLASANSNVRIIVRDLSGKYSWDSAI---------- 1612
Query: 1002 QKLFVPEPRPVPKNDVGFKYSVKHRPFPEEVD---------------KIPFVKADLSIPD 1046
L+ P P F S+ H+ PEE + F + ++P
Sbjct: 1613 --LYGPPPVSGLSEPTSFMLSLSHQEKPEEPPTSNECLEDITVKDGLSLQFKRFRETVPT 1670
Query: 1047 LHEIVTEE--LEERHEKL---------RSGMAQQI---------------AYEIHLEQQS 1080
I EE L+E + L R+G++ I L+Q +
Sbjct: 1671 WDTIRDEEDVLDELLQYLGVTSPECLQRTGISLNIPAPQPVCISEKQENDVINAILKQHT 1730
Query: 1081 EE-ELQKRSFPD----PVTDCKPPP--PAQEFQTARLFLSHFGFLSLEALKEPANSRLPP 1133
EE E ++ F D V +P P P F RL LS G S + R
Sbjct: 1731 EEKEFVEKHFNDLNMKAVEQDEPIPQKPQSAFYYCRLLLSILGMNSWD-------KRRSF 1783
Query: 1134 HLIALDSTIPGFFDDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRTVQPHFL 1193
HL+ + + ++ LD CR + +FY+ GQ+ IL N S+ +
Sbjct: 1784 HLLKKNEKL---LRELRNLDSRQCRETHKIAVFYVAEGQEDKHSILTNTGGSQAYE---- 1836
Query: 1194 EFLLSLGWSVDVGRHPGWTG 1213
+F+ LGW V++ H G+ G
Sbjct: 1837 DFVAGLGWEVNLTNHCGFMG 1856
Score = 42.7 bits (99), Expect = 0.003
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 140 LCLQVLRAIQKLARESSLMARETWEVLLLFLLQINDILLAPPT-----VQGGIAENLAEK 194
+C ++L + + + S M ++TWE +LL LL++ + +L P+ QG LA +
Sbjct: 557 MCKRILNIYRYMVVQVS-MDKKTWEQMLLVLLRVTESVLKMPSQAFLQFQGKKNMTLAGR 615
Query: 195 LIGVLFEV----WLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLR 250
L G LF+ W+ A + + W ++++ + + +WS + LT L R
Sbjct: 616 LAGPLFQTLIVAWIKANLNVYISRELWDDLLSVLSSLTYWEELATEWSLTMETLTKVLAR 675
Query: 251 FTY 253
Y
Sbjct: 676 NLY 678
Score = 33.9 bits (76), Expect = 1.2
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 1391 VIFIHPLNTGLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESD 1450
+I I+P+ +F I+I + PL DG IV+ + L +VR T IN R +
Sbjct: 1930 LIVIYPMKNHMFSIQIMKKP-EVPFFGPLFDGAIVNGKVLPIMVRATAINASRALKSLIP 1988
Query: 1451 SYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLF 1484
Y + R + + IV + +F +F
Sbjct: 1989 LYQNFYEERARYLQTIVQHHLEPTTFEDFAAQVF 2022
>gi|118600961 akt substrate AS250 [Homo sapiens]
Length = 1873
Score = 62.4 bits (150), Expect = 3e-09
Identities = 86/359 (23%), Positives = 141/359 (39%), Gaps = 68/359 (18%)
Query: 899 AEATLTCIMQLLGAFPSPSGPASPCSLVNET---TLIKYSRLP--TINKHSFRYFVLDNS 953
A + ++ LG +P GPA SLV+E ++ S L + + FV ++S
Sbjct: 1375 ARMVMAHLVNHLGHYPLSGGPAILHSLVSENHDNAHVEGSELSFEVFRSPNLQLFVFNDS 1434
Query: 954 VILAML----EQPLGNEQNDFFPSVTVLVRGMSGRLAWAQQL-------CLLPRGAKANQ 1002
+++ L E P+G V V+VR +SG+ +W ++ CL P G +
Sbjct: 1435 TLISYLQTPTEGPVGGSPVGSLSDVRVIVRDISGKYSWDGKVLYGPLEGCLAPNGRNPS- 1493
Query: 1003 KLFVPEPRPVPKNDVGFKYSVKHRP-FPEEVDKIPFVKADLSIPDLHE---------IVT 1052
F S HR F + D + D + L E ++
Sbjct: 1494 ----------------FLISSWHRDTFGPQKDSSQVEEGDDVLDKLLENIGHTSPECLLP 1537
Query: 1053 EELEERHEKLRS-GM---AQQIAYEIHLEQQSEEE--LQKRSFPDP--VTDCKPPPPAQE 1104
+L L GM ++ E+ L Q ++E+ +Q +F VT P P +
Sbjct: 1538 SQLNLNEPSLTPCGMNYDQEKEIIEVILRQNAQEDEYIQSHNFDSAMKVTSQGQPSPVEP 1597
Query: 1105 ---FQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSTIPGFFDDIGYLDLLPCRPFD 1161
F RL L G S + K HL+ +S + ++ LD CR
Sbjct: 1598 RGPFYFCRLLLDDLGMNSWDRRKNF-------HLLKKNSKL---LRELKNLDSRQCRETH 1647
Query: 1162 TVFIFYMKPGQKTNQEILKNVESSRTVQPHFLEFLLSLGWSVDVGRHPGWTGHVSTSWS 1220
+ +FY+ GQ+ IL N S+ + +F+ LGW VD+ H G+ G + + S
Sbjct: 1648 KIAVFYIAEGQEDKCSILSNERGSQAYE----DFVAGLGWEVDLSTHCGFMGGLQRNGS 1702
Score = 47.0 bits (110), Expect = 1e-04
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 137 QIRLCLQVLRAIQKLARESSLMARETWEVLLLFLLQINDILLAPPT---VQGGIAENLAE 193
Q+ C VL +++ E + M ++TWE +L LL+I + ++ P ++ A++LA
Sbjct: 538 QVDACKAVLIIFRRMIMELT-MNKKTWEQMLQILLRITEAVMQKPKDKQIKDLFAQSLAG 596
Query: 194 KLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTY 253
L L W+ A + + W ++++ ++ +W+ ++ +LT+ L R Y
Sbjct: 597 LLFRTLMVAWIRANLCVYISRELWDDFLGVLSSLTEWEELINEWANIMDSLTAVLARTVY 656
Query: 254 G 254
G
Sbjct: 657 G 657
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 39.3 bits (90), Expect = 0.029
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLSS 421
PTP + ++ + TP +R + + + ++ +S+ S++ +S +SS+S SS
Sbjct: 2582 PTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Query: 422 PNQTSSEPRP-------LPAPRRPK 439
+ +SS P P LP P PK
Sbjct: 2642 SSSSSSSPSPAKPGPQALPKPASPK 2666
>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
Length = 1035
Score = 36.6 bits (83), Expect = 0.19
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 1034 KIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYEIHLEQQSEEE-----LQKRS 1088
++PF P L + E L+++ E + + QQ+ ++ L+ S + L++++
Sbjct: 530 RVPFAPGPSPPPLLGNMDQERLKKQQELAAAALYQQLQHQQFLQLVSSRQLPQCALREKA 589
Query: 1089 FPDPVTDCKPPPPAQEFQTARLFLSHFGFLSLEALKEP 1126
+T PPPP Q+ Q FL L+ALK P
Sbjct: 590 ALGDLTPPPPPPPQQQQQQLTAFLQ-----QLQALKPP 622
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 36.2 bits (82), Expect = 0.24
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 355 PRSDSAPPTPVNRLSMPQ-----SAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKV 409
P+ D+ PP P SMP A + PP+ R+ + + +T + S++
Sbjct: 990 PKQDAVPPVPAALQSMPTLDPRLHRAATAGPPNARQRPGASTDSSTQGANLPDFELLSRI 1049
Query: 410 QHQTSSTSPLSSPNQTS--SEPRPLPAPRRPKV 440
++T ++P + S+PR AP P++
Sbjct: 1050 LKTVNATGSSAAPGSSDKPSDPRVRKAPTDPRL 1082
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 36.2 bits (82), Expect = 0.24
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 348 AFLGISRPRSDSAPPTPVNRL-SMPQSAAVSTTPPHNRR-----HRAVTVNKATMKTSTV 401
+ L + P S +APP P+ R SMP +A +TP H R +T ++A +S V
Sbjct: 521 SLLSLQHPPS-TAPPVPLLRSHSMPSAACTISTPHHPFRGSYSFDDHITDSEALSHSSHV 579
Query: 402 STAHASKVQHQTSSTSPLSSPNQTSSEPRP 431
T+H ++ Q + PL +S EP P
Sbjct: 580 FTSHPRMLKRQPAIELPLGG-EYSSEEPGP 608
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 36.2 bits (82), Expect = 0.24
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 348 AFLGISRPRSDSAPPTPVNRL-SMPQSAAVSTTPPHNRR-----HRAVTVNKATMKTSTV 401
+ L + P S +APP P+ R SMP +A +TP H R +T ++A +S V
Sbjct: 521 SLLSLQHPPS-TAPPVPLLRSHSMPSAACTISTPHHPFRGSYSFDDHITDSEALSHSSHV 579
Query: 402 STAHASKVQHQTSSTSPLSSPNQTSSEPRP 431
T+H ++ Q + PL +S EP P
Sbjct: 580 FTSHPRMLKRQPAIELPLGG-EYSSEEPGP 608
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.4 bits (80), Expect = 0.42
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 31/196 (15%)
Query: 442 SILNLFGSWLFDAAFVHCKLHNGINRDSSMTAITTQASMEFRRKGSQMST---------D 492
++L + + D+ C+ HN SS T++ + FR+K + T
Sbjct: 7361 AVLEMHNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPIFRKKPHPIETLKGADVHLEC 7420
Query: 493 TMVSNPMFDASEFPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIN 552
+ P F S + D E S K + + +L+ ++L + I
Sbjct: 7421 ELQGTPPFHVSWYKDKRE-------------LRSGKKYKIMSENFLTSIHILNVDAADIG 7467
Query: 553 DYVCHPV--------LASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKSY 604
+Y C + S+ L +PP F L I VV + L+T + E +
Sbjct: 7468 EYQCKATNDVGSDTCVGSIALKAPPRFVKKLSDISTVVGKEVQ-LQTTIEGAEPISVVWF 7526
Query: 605 VNPTELRRSSINILLS 620
+ E+ R S NI +S
Sbjct: 7527 KDKGEIVRESDNIWIS 7542
Score = 32.3 bits (72), Expect = 3.5
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 994 LPRGAKANQKLFVPEP----RPVPKNDVGFKYSVKHRPFPEEVDKIPFVKADLSIPDLHE 1049
LP+ +K+ VP P P P+ +V K V+ + F E +K+ F ++P E
Sbjct: 9430 LPKKPVPEEKVAVPVPVAKKAPPPRAEVSKKTVVEEKRFVAE-EKLSF-----AVPQRVE 9483
Query: 1050 IVTEELEERHEKLRSGMAQQIAYEIHLEQQSEEE 1083
+ E+ E S + ++ ++ E++ EEE
Sbjct: 9484 VTRHEVSAEEEWSYSEEEEGVSISVYREEEREEE 9517
>gi|239753480 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1344
Score = 35.4 bits (80), Expect = 0.42
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 339 MRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKT 398
+ G SC + IS S +P +L PQS S PP + H T A +
Sbjct: 960 VNGFSCQNSQSISISTETSQEKCSSPGLQLHDPQS-GTSAPPPGLQLHDPQTGTSAPPRV 1018
Query: 399 STVSTAHASKVQHQTSSTSPLSSPNQTSSEPRP 431
S+ +T K++HQ S SP + P+ + P
Sbjct: 1019 SSCTT---RKLEHQPHSGSPAAPPSNCNISSPP 1048
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 35.4 bits (80), Expect = 0.42
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 7/175 (4%)
Query: 914 PSPSGP-ASPCSLVNETTLIKYSRLPTIN---KHSFRYFVLDNSVILAMLEQPLGNEQND 969
P+PSGP ASP + E++ K + P + K VIL +++ L E+
Sbjct: 1127 PAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETLSMEKIP 1186
Query: 970 FFPSVTVLVRGMSGRLAWAQQLCLLPRGAKANQKLFVPEPRPVPKNDVGFKYSVKHRPFP 1029
P VT + +L + L + +K +PE + + K +P P
Sbjct: 1187 --PMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEK-KPTP 1243
Query: 1030 EEVDKIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYEIHLEQQSEEEL 1084
E+ +P K H+++ +++ EKL +A + E Q E L
Sbjct: 1244 EDKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGL 1298
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 35.4 bits (80), Expect = 0.42
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 7/175 (4%)
Query: 914 PSPSGP-ASPCSLVNETTLIKYSRLPTIN---KHSFRYFVLDNSVILAMLEQPLGNEQND 969
P+PSGP ASP + E++ K + P + K VIL +++ L E+
Sbjct: 1127 PAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETLSMEKIP 1186
Query: 970 FFPSVTVLVRGMSGRLAWAQQLCLLPRGAKANQKLFVPEPRPVPKNDVGFKYSVKHRPFP 1029
P VT + +L + L + +K +PE + + K +P P
Sbjct: 1187 --PMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEK-KPTP 1243
Query: 1030 EEVDKIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYEIHLEQQSEEEL 1084
E+ +P K H+++ +++ EKL +A + E Q E L
Sbjct: 1244 EDKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGL 1298
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 35.4 bits (80), Expect = 0.42
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 356 RSDSAPPTPVNRLSM--PQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQT 413
R+ S PP P R S P VS +PP +R VT ++ ++S+ H K +
Sbjct: 613 RTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVT----KRRSPSLSSKH-RKGSSPS 667
Query: 414 SSTSPLSSPNQTSSEPRPLPAPRRPKVNS 442
ST SP Q + P P PR P+ +S
Sbjct: 668 RSTREARSP-QPNKRHSPSPRPRAPQTSS 695
Score = 31.2 bits (69), Expect = 7.8
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 353 SRPRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQ 412
SR S P+P R S + PP R R+ + + ++S + +S
Sbjct: 306 SRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSS 365
Query: 413 TSSTSPLSSPNQTSSEPR 430
S + P P +TSS PR
Sbjct: 366 RSRSPPKKPPKRTSSPPR 383
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 35.0 bits (79), Expect = 0.54
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 331 LPQIFFRAMRGISCLVDAFLGISR---PRSDSAPPTPVNRLSMPQSAAVSTTP------P 381
L Q+ + +RG+ C V G ++ RS A +P R ++ SA + P P
Sbjct: 17 LRQLNEQRLRGLFCDVTLIAGDTKFPAHRSVLAASSPFFREALLTSAPLPLPPATGGAAP 76
Query: 382 HNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLSSPNQTSSEPRPLPAPRRPKV- 440
+ A + + ++ +S+ S++ AS +SS+ P +SP SS PR L P P
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASP-PASSPPRVLELPGVPAAA 135
Query: 441 -NSILNLFGS 449
+ +LN S
Sbjct: 136 FSDVLNFIYS 145
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 35.0 bits (79), Expect = 0.54
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 331 LPQIFFRAMRGISCLVDAFLGISR---PRSDSAPPTPVNRLSMPQSAAVSTTP------P 381
L Q+ + +RG+ C V G ++ RS A +P R ++ SA + P P
Sbjct: 17 LRQLNEQRLRGLFCDVTLIAGDTKFPAHRSVLAASSPFFREALLTSAPLPLPPATGGAAP 76
Query: 382 HNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLSSPNQTSSEPRPLPAPRRPKV- 440
+ A + + ++ +S+ S++ AS +SS+ P +SP SS PR L P P
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASP-PASSPPRVLELPGVPAAA 135
Query: 441 -NSILNLFGS 449
+ +LN S
Sbjct: 136 FSDVLNFIYS 145
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 34.7 bits (78), Expect = 0.71
Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Query: 337 RAMRGISCLVDAFLGISRPRSD-SAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVT---VN 392
R + S + + G R + PP P + S S+A ST H+ H + +
Sbjct: 1196 RPVSNSSSFLGSLFGSKRGKGPFQMPPPPTGQASASSSSASSTHHHHHHHHHGHSHGGLG 1255
Query: 393 KATMKTSTVSTAHASKVQHQTSSTSPLSSPNQTSSEPRPLPAPRRPKVNSI 443
S + HA Q + P P Q S P P P P++ SI
Sbjct: 1256 VLPDGQSKLQALHAQYCQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQLGSI 1306
>gi|168823443 RAD54-like 2 [Homo sapiens]
Length = 1467
Score = 34.7 bits (78), Expect = 0.71
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 839 CLCVWLTEHPDMLDE---KDCL--KEVLEIVELGISGSKSKNNEQEVKYKGDKEPNPASM 893
C+C + HPD+L E K+ L ++ L++ ELG +G+ ++ Q K KG+ +SM
Sbjct: 616 CVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPPQGTKGKGEDSTLASSM 675
Query: 894 RVKDAAEATLTCIMQLLGAFP 914
EAT + +Q +G P
Sbjct: 676 -----GEATNSKFLQGVGFNP 691
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 34.3 bits (77), Expect = 0.93
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 353 SRPRSDSAPPTPVNRLSMP---QSAAVSTTP-PHNRRHRAVTVNKATMKTSTVSTAHASK 408
++P+ P +++ P Q AA + P P +R R++ T + +T+S S
Sbjct: 1803 AQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSA 1862
Query: 409 VQHQTSSTSPLSSPNQTSSEPRPLPAPRRP 438
+ +P SS +QTS +PLP R P
Sbjct: 1863 TPPARLAKTPSSSSSQTSPASQPLPRKRPP 1892
>gi|75677325 kinase suppressor of ras [Homo sapiens]
Length = 762
Score = 33.9 bits (76), Expect = 1.2
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 364 PVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLSSPN 423
P+ RL +S P +R A + T+ + H + H SS++P S+ +
Sbjct: 260 PLTRLRRTESVPSDINNPVDR---AAEPHFGTLPKALTKKEHPPAMNHLDSSSNPSSTTS 316
Query: 424 QTSSEPRPLPAPRRP 438
T S P P P P
Sbjct: 317 STPSSPAPFPTSSNP 331
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 33.9 bits (76), Expect = 1.2
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 994 LPRGAKANQKLFVPEPRPVPKNDVGFKYSVKHRPFPEEVDKIPFVKADLSIPDLHEIVTE 1053
LP + A Q+ RP+ D S + +P PE+ + F K DL +P ++
Sbjct: 279 LPSKSVAMQQKPTAYVRPMDGQDQAPSESPELKPLPEDYRQQTFEKTDLKVPAKAKLTKL 338
Query: 1054 ELEERHEKLRSGMAQQIAYEIHLEQQSEEELQKRSFPDPVTDCKPPPPAQ 1103
++ + + Q + E+H ++ +E+ S+P P+T P A+
Sbjct: 339 KMPSQ------SVEQTYSNEVHCVEEILKEM-THSWPPPLTAIHTPSTAE 381
>gi|61676089 hypothetical protein LOC222584 [Homo sapiens]
Length = 1011
Score = 33.9 bits (76), Expect = 1.2
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 1009 PRPVPKNDVGFKYSVKHRPFPEEVDKIPFVKA-----DLSIPDLHEIVTEELEERHEKLR 1063
P+ VP ++ + +P PE + K+P L +P+ H + + H +
Sbjct: 577 PKEVPDTPTNVQH-LTDKPLPESIPKLPLQSEAPKMHTLQVPENHSVALNQTTNGHTESN 635
Query: 1064 SGMAQQIAYEIHLE----QQSEEELQKRSFP 1090
+ + + + E QQ+E L++RSFP
Sbjct: 636 NYIYKTLGVNKQTENLKNQQTENLLKRRSFP 666
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 33.5 bits (75), Expect = 1.6
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 355 PRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTS 414
PR TPV S P A+S T + ++ T T TST ST S T+
Sbjct: 1844 PRGCPVTSTPVTAPSTPSGRAISPTQSTSSWQKSRTTTLVT--TSTTSTPQTSTTYAHTT 1901
Query: 415 STSPL---------------SSPNQTSSEPRPLPAP 435
ST+ +SP T+S P P+P
Sbjct: 1902 STTSAPTARTTSAPTTRTTSASPASTTSGPGNTPSP 1937
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 33.1 bits (74), Expect = 2.1
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 355 PRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKA----TMKTSTVSTAHASKVQ 410
P + P P P +T PP +T + TM T + +T +S +
Sbjct: 1651 PPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPIT 1710
Query: 411 HQT--SSTSPLSSPNQTSSEPRPLPAPRRP 438
T SST+ S P T + P P P P
Sbjct: 1711 TTTTPSSTTTPSPPPTTMTTPSPTTTPSPP 1740
>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 33.1 bits (74), Expect = 2.1
Identities = 46/195 (23%), Positives = 76/195 (38%), Gaps = 40/195 (20%)
Query: 266 DASLIPPEMDNECVAQTWFRFLHML--SNPVDLSNPAIISSTPKFQEQFLNVSGMPQELN 323
D +P + + E AQ + L++ S P +P+I SS +FQ+
Sbjct: 3691 DVPGVPQKREAEETAQKMAQLLYLQEESTPYKPQSPSIPSSHLRFQKA------------ 3738
Query: 324 QYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDS-----APPTPVNRLSMPQSAAVST 378
P +HLP + + DAFL S +S + P+P + S + S
Sbjct: 3739 --PVGQHLPSVS-------PSVSDAFLPPSSQPEESYCLVVSSPSPSSPHSPGLFPSTSE 3789
Query: 379 TPPHNRRHR------AVTVNKATMKTSTVSTA------HASKVQHQTSSTSPLSSPNQTS 426
P +R + A+ V++A+ T+S + + ST P+ +
Sbjct: 3790 YPGDSRVQKKLGPTSALFVDRASSPILTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLD 3849
Query: 427 SEPRPLPAPRRPKVN 441
S P P+ APR P N
Sbjct: 3850 SSPDPVDAPRTPMDN 3864
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 33.1 bits (74), Expect = 2.1
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 371 PQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLSSPNQTSSEPR 430
P +A+++ TPP R + T T STA +K+ S T LS + T + PR
Sbjct: 170 PSTASLTRTPP---RASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPR 226
Query: 431 PLPAPRRPKVN 441
P P+ +
Sbjct: 227 ASPTGSPPRAS 237
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 33.1 bits (74), Expect = 2.1
Identities = 46/195 (23%), Positives = 76/195 (38%), Gaps = 40/195 (20%)
Query: 266 DASLIPPEMDNECVAQTWFRFLHML--SNPVDLSNPAIISSTPKFQEQFLNVSGMPQELN 323
D +P + + E AQ + L++ S P +P+I SS +FQ+
Sbjct: 3691 DVPGVPQKREAEETAQKMAQLLYLQEESTPYKPQSPSIPSSHLRFQKA------------ 3738
Query: 324 QYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDS-----APPTPVNRLSMPQSAAVST 378
P +HLP + + DAFL S +S + P+P + S + S
Sbjct: 3739 --PVGQHLPSVS-------PSVSDAFLPPSSQPEESYCLVVSSPSPSSPHSPGLFPSTSE 3789
Query: 379 TPPHNRRHR------AVTVNKATMKTSTVSTA------HASKVQHQTSSTSPLSSPNQTS 426
P +R + A+ V++A+ T+S + + ST P+ +
Sbjct: 3790 YPGDSRVQKKLGPTSALFVDRASSPILTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLD 3849
Query: 427 SEPRPLPAPRRPKVN 441
S P P+ APR P N
Sbjct: 3850 SSPDPVDAPRTPMDN 3864
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 33.1 bits (74), Expect = 2.1
Identities = 46/195 (23%), Positives = 76/195 (38%), Gaps = 40/195 (20%)
Query: 266 DASLIPPEMDNECVAQTWFRFLHML--SNPVDLSNPAIISSTPKFQEQFLNVSGMPQELN 323
D +P + + E AQ + L++ S P +P+I SS +FQ+
Sbjct: 3691 DVPGVPQKREAEETAQKMAQLLYLQEESTPYKPQSPSIPSSHLRFQKA------------ 3738
Query: 324 QYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDS-----APPTPVNRLSMPQSAAVST 378
P +HLP + + DAFL S +S + P+P + S + S
Sbjct: 3739 --PVGQHLPSVS-------PSVSDAFLPPSSQPEESYCLVVSSPSPSSPHSPGLFPSTSE 3789
Query: 379 TPPHNRRHR------AVTVNKATMKTSTVSTA------HASKVQHQTSSTSPLSSPNQTS 426
P +R + A+ V++A+ T+S + + ST P+ +
Sbjct: 3790 YPGDSRVQKKLGPTSALFVDRASSPILTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLD 3849
Query: 427 SEPRPLPAPRRPKVN 441
S P P+ APR P N
Sbjct: 3850 SSPDPVDAPRTPMDN 3864
>gi|4505507 oligophrenin 1 [Homo sapiens]
Length = 802
Score = 33.1 bits (74), Expect = 2.1
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 368 LSMPQSAAVSTTPPHN---RRHRAVTVNKATMKTSTVSTAHA-----SKVQHQTSSTSPL 419
L P+ +A PP RRH+ +T++K ++ TV + ++QHQT
Sbjct: 565 LGPPEESAAPPVPPPRVTARRHKPITISKRLLRERTVFYTSSLDESEDEIQHQT------ 618
Query: 420 SSPNQT-SSEPRPLPAPRRPKV 440
PN T +S P P+ PK+
Sbjct: 619 --PNGTITSSIEPPKPPQHPKL 638
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 33.1 bits (74), Expect = 2.1
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Query: 346 VDAFLGISRPRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAH 405
VD+ ++ S+ PTP SMP S P + T+ AT ST+ST
Sbjct: 831 VDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTL-VATSAISTLSTTP 889
Query: 406 ASKVQHQTSSTSPLSSPNQTSSEPRPLPAP 435
T+ST SSP + P P
Sbjct: 890 VDTSTPVTNSTEARSSPTTSEGTSMPTSTP 919
Score = 32.0 bits (71), Expect = 4.6
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 352 ISRPRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQH 411
IS P S P T + ++P +++ ++T ++ V +T +S+ +TA + +
Sbjct: 2743 ISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSM-- 2800
Query: 412 QTSSTSPLSSPNQTSSEPRPLPAPRRPKVNS 442
P S+P++TS+ +P P +S
Sbjct: 2801 ------PTSTPSETSTPLTSMPVNHTPVASS 2825
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,302,722
Number of Sequences: 37866
Number of extensions: 2865680
Number of successful extensions: 10800
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 10584
Number of HSP's gapped (non-prelim): 412
length of query: 1494
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1379
effective length of database: 13,892,928
effective search space: 19158347712
effective search space used: 19158347712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.