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Search of human proteins with 34577096
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens]
(348 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens] 736 0.0
gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens] 736 0.0
gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens] 736 0.0
gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens] 736 0.0
gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens] 736 0.0
gi|50284696 IBR domain containing 2 [Homo sapiens] 108 5e-24
gi|5453557 ariadne homolog 2 [Homo sapiens] 101 1e-21
gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding pro... 96 4e-20
gi|38045938 ring finger protein 144 [Homo sapiens] 96 4e-20
gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo sa... 94 2e-19
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo... 91 2e-18
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 78 1e-14
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 78 1e-14
gi|169790973 parkin isoform 3 [Homo sapiens] 77 3e-14
gi|169790971 parkin isoform 2 [Homo sapiens] 77 3e-14
gi|169790969 parkin isoform 1 [Homo sapiens] 77 3e-14
gi|35493801 ring finger protein 19 [Homo sapiens] 76 4e-14
gi|35493782 ring finger protein 19 [Homo sapiens] 76 4e-14
gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1 is... 68 1e-11
gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1 ... 68 1e-11
gi|46370057 ring finger protein 216 isoform b [Homo sapiens] 64 2e-10
gi|46358403 ring finger protein 216 isoform a [Homo sapiens] 64 2e-10
gi|22749145 ring finger protein 217 [Homo sapiens] 49 7e-06
gi|109150431 ring finger protein 31 [Homo sapiens] 47 2e-05
gi|117606347 F-box protein 43 isoform a [Homo sapiens] 47 3e-05
gi|117606351 F-box protein 43 isoform b [Homo sapiens] 47 3e-05
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 42 0.001
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 39 0.007
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 39 0.007
gi|56605981 tripartite motif-containing 72 [Homo sapiens] 35 0.076
>gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 736 bits (1899), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 60
MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER
Sbjct: 127 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 186
Query: 61 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 120
AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC
Sbjct: 187 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 246
Query: 121 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 180
LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV
Sbjct: 247 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 306
Query: 181 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 240
VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ
Sbjct: 307 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 366
Query: 241 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 300
ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM
Sbjct: 367 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 426
Query: 301 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 348
QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED
Sbjct: 427 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 474
>gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 736 bits (1899), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 60
MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER
Sbjct: 127 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 186
Query: 61 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 120
AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC
Sbjct: 187 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 246
Query: 121 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 180
LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV
Sbjct: 247 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 306
Query: 181 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 240
VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ
Sbjct: 307 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 366
Query: 241 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 300
ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM
Sbjct: 367 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 426
Query: 301 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 348
QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED
Sbjct: 427 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 474
>gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 736 bits (1899), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 60
MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER
Sbjct: 127 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 186
Query: 61 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 120
AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC
Sbjct: 187 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 246
Query: 121 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 180
LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV
Sbjct: 247 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 306
Query: 181 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 240
VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ
Sbjct: 307 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 366
Query: 241 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 300
ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM
Sbjct: 367 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 426
Query: 301 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 348
QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED
Sbjct: 427 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 474
>gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens]
Length = 348
Score = 736 bits (1899), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 60
MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER
Sbjct: 1 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 60
Query: 61 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 120
AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC
Sbjct: 61 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 120
Query: 121 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 180
LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV
Sbjct: 121 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 180
Query: 181 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 240
VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ
Sbjct: 181 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 240
Query: 241 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 300
ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM
Sbjct: 241 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 300
Query: 301 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 348
QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED
Sbjct: 301 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 348
>gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 736 bits (1899), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 60
MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER
Sbjct: 127 MQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDER 186
Query: 61 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 120
AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC
Sbjct: 187 AVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKAC 246
Query: 121 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 180
LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV
Sbjct: 247 LKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADV 306
Query: 181 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 240
VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ
Sbjct: 307 VYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQ 366
Query: 241 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 300
ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM
Sbjct: 367 ADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCM 426
Query: 301 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 348
QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED
Sbjct: 427 QYFCWICMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 474
>gi|50284696 IBR domain containing 2 [Homo sapiens]
Length = 303
Score = 108 bits (271), Expect = 5e-24
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 91 LFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVAT- 149
L C +C CE+ + EC+ ++C ACLK Y ++ IR+G + CP+ C + T
Sbjct: 27 LITCKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTL 86
Query: 150 -PGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQ--LPV-MQEPGCTMGI-CS 204
++ LV + F Y RL + + L +CP CQ PV +PG + + C
Sbjct: 87 QEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECP 146
Query: 205 SCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEE 264
SC+ FC+ C+ +H C+ + ++ + L +A
Sbjct: 147 SCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDA-------------------- 186
Query: 265 MESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFNDPG 324
E K CP C IE+ +GC +M C C FCW C+ +L +H++
Sbjct: 187 -------EAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLDNDIFLRHYDK-- 237
Query: 325 SPCFNRL 331
PC N+L
Sbjct: 238 GPCRNKL 244
>gi|5453557 ariadne homolog 2 [Homo sapiens]
Length = 493
Score = 101 bits (251), Expect = 1e-21
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQV 153
C++C + + E + L C+H +C++C + + + ++DG ++C CP V
Sbjct: 139 CAVCM-QFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFV 197
Query: 154 KELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPV-MQEPGCTMGICSSCNFAFC 211
L+ EL +Y R L + ++ + CP C + + +QEP C+ CN FC
Sbjct: 198 FPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFC 257
Query: 212 TLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWL 271
CR YH + C ++ + K ++ E+ ++
Sbjct: 258 FKCRQMYHAPTDCATI---------------------------RKWLTKCADDSETANYI 290
Query: 272 EKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMG 309
++K CP C IEK GCN M C+ C FCW+C+G
Sbjct: 291 SAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLG 328
Score = 29.6 bits (65), Expect = 4.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 77 DFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDY 124
D + A I C+IC + G M +C+H +C CL D+
Sbjct: 283 DSETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDW 330
>gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding
protein homolog 1 [Homo sapiens]
Length = 557
Score = 96.3 bits (238), Expect = 4e-20
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 94 CSICFCEKLGSECMYF--LECRHVYCKACLKDYFEIQI-RDGQVQCLNCPEPKCPSVATP 150
C IC+ S YF LEC H +C C +Y +I +G Q ++CP C +
Sbjct: 186 CQICYLNYPNS---YFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD 242
Query: 151 GQVKELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFA 209
V L+ ++++ +Y L+ S ++ + +CP P C V + + C
Sbjct: 243 NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ 302
Query: 210 FCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 269
FC C +H CK + K+ I+K ++ E+
Sbjct: 303 FCFNCGENWHDPVKCK---------------------------WLKKWIKKCDDDSETSN 335
Query: 270 WLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMG 309
W+ N+K CP C IEK GCN M C C FCW+C+G
Sbjct: 336 WIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 377
>gi|38045938 ring finger protein 144 [Homo sapiens]
Length = 292
Score = 96.3 bits (238), Expect = 4e-20
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 33/247 (13%)
Query: 91 LFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVA-- 148
L C +C E + +C+ ++C CLK Y E+ I++G ++CP+ CP
Sbjct: 17 LVSCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHL 76
Query: 149 TPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQ-LPVMQEPGCTMG---ICS 204
+++ +V AE+ RY +L + + +CP CQ + +Q+ G C
Sbjct: 77 QENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVGLQTPQPVQCK 136
Query: 205 SCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEE 264
+C FC+ C+ ++H C T + +L + + A +
Sbjct: 137 ACRMEFCSTCKASWHPGQGCPET------MPITFLPGETS----------------AAFK 174
Query: 265 MESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFNDPG 324
ME + K CP C IE+ +GC +M C C FCW C+ SL H++
Sbjct: 175 MEED---DAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLLIHYDK-- 229
Query: 325 SPCFNRL 331
PC N+L
Sbjct: 230 GPCRNKL 236
Score = 28.9 bits (63), Expect = 7.1
Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 11/141 (7%)
Query: 179 DVVYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTY------HGVSPCKVTAEKLM 232
D+ P C+L + + P M + C FCTLC Y G+ ++
Sbjct: 11 DLALDPLVSCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETA-ISCPDAA 69
Query: 233 DLRNEYLQADEANKRL---LDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLD 289
+ +LQ +E + + QRY K ++ + + W ++ C + L
Sbjct: 70 CPKQGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDV-GLQ 128
Query: 290 GCNKMTCTGCMQYFCWICMGS 310
+ C C FC C S
Sbjct: 129 TPQPVQCKACRMEFCSTCKAS 149
>gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo
sapiens]
Length = 1089
Score = 93.6 bits (231), Expect = 2e-19
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 93 LCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQ 152
LC IC C E + C H +C+ C + + ++I++G+ + CP C +
Sbjct: 332 LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDI 391
Query: 153 VKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPV-MQEPGCTMGICSSCNFA-- 209
++ +V E+ RY + +++ ++ + +CP P C V + + G + +F
Sbjct: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
Query: 210 ------------FCTLCRLTYHGVSPC---KVTAEKLMDLRNEYLQADEANKRLLDQRYG 254
FC C H C K +K+ +++ E L
Sbjct: 452 RAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVG------------- 498
Query: 255 KRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICM 308
+ +A E+ + WL NSK C C +PI+K +GCN M C C FCWIC+
Sbjct: 499 ---VSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
sapiens]
Length = 2517
Score = 90.5 bits (223), Expect = 2e-18
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQV 153
C +C + + L C H CK+C +Y +I V CP CP+ T +
Sbjct: 2070 CPVCVSPLGCDDDLPSLCCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAFI 2129
Query: 154 KELVEA-ELFARYDRLLLQSSLDLMADVVYC--PRPCCQLPVMQEPGCTMGICSSCNFAF 210
+ +V + E+ ++Y++ LL+ ++ +++ +C P+ C ++ Q GC CS C +A
Sbjct: 2130 RAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGCGT-TCSKCGWAS 2188
Query: 211 CTLCRL-TYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 269
C C H + C ++ + D Y E +SK
Sbjct: 2189 CFNCSFPEAHYPASCGHMSQWVDD--GGYYDGMSV-------------------EAQSKH 2227
Query: 270 WLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGS 310
+ SK CP C PIEK +GC MTC C FCW C+ S
Sbjct: 2228 LAKLISKRCPSCQAPIEKNEGCLHMTCAKCNHGFCWRCLKS 2268
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 78.2 bits (191), Expect = 1e-14
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 29/226 (12%)
Query: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQV 153
C +C L C H C+ CL+ Y ++I + +V ++CPE C P +
Sbjct: 119 CPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVP-ISCPE--CSERLNPHDI 175
Query: 154 KELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQE--PGCTMGICS--SCNF 208
+ L+ + L +Y+ +L+ L D +CP P C V+ C C C
Sbjct: 176 RLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCQT 235
Query: 209 AFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESK 268
FC C+ +H C + ++ R + L+ K YG+
Sbjct: 236 EFCYHCKQIWHPNQTCDMARQQ----RAQTLRV--RTKHTSGLSYGQ------------- 276
Query: 269 EWLEKNSKSCPCCGTPIEKLD--GCNKMTCTGCMQYFCWICMGSLS 312
E + K CP C I K++ CN MTC C FCW+CM +S
Sbjct: 277 ESGPDDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEIS 322
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 77.8 bits (190), Expect = 1e-14
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 28/226 (12%)
Query: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQV 153
C +C L C H C+ CL+ Y ++I + +V ++CPE C P +
Sbjct: 119 CPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVP-ISCPE--CSERLNPHDI 175
Query: 154 KELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQE--PGCTMGIC--SSCNF 208
+ L+ + L +Y+ +L+ L D +CP P C V+ C C C
Sbjct: 176 RLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCQT 235
Query: 209 AFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESK 268
FC C+ +H C + ++ R + L+ K YG+ +
Sbjct: 236 EFCYHCKQIWHPNQTCDMARQQ----RAQTLRV--RTKHTSGLSYGQ------------E 277
Query: 269 EWLEKNSKSCPCCGTPIEKLD--GCNKMTCTGCMQYFCWICMGSLS 312
+ K CP C I K++ CN MTC C FCW+CM +S
Sbjct: 278 SGPADDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEIS 323
>gi|169790973 parkin isoform 3 [Homo sapiens]
Length = 316
Score = 76.6 bits (187), Expect = 3e-14
Identities = 68/251 (27%), Positives = 98/251 (39%), Gaps = 34/251 (13%)
Query: 88 NSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEP----K 143
NS+ C C + ++ RHV C C Y ++ D Q ++ P+
Sbjct: 83 NSRNITCITC-TDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQF--VHDPQLGYSLP 139
Query: 144 CPSVATPGQVKEL-----VEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPG- 197
C + +KEL + E + RY + + + M V+ CPRP C ++ EP
Sbjct: 140 CVAGCPNSLIKELHHFRILGEEQYNRYQQYGAEECVLQMGGVL-CPRPGCGAGLLPEPDQ 198
Query: 198 ----CTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRY 253
C G C FAFC C+ YH C E Y R
Sbjct: 199 RKVTCEGGNGLGCGFAFCRECKEAYHE-GECSAVFEASGTTTQAY-------------RV 244
Query: 254 GKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMGSL 311
+R ++A E SKE ++K +K CP C P+EK GC M C C +CW C
Sbjct: 245 DERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEW 304
Query: 312 SRANPYKHFND 322
+R H+ D
Sbjct: 305 NRVCMGDHWFD 315
>gi|169790971 parkin isoform 2 [Homo sapiens]
Length = 437
Score = 76.6 bits (187), Expect = 3e-14
Identities = 68/251 (27%), Positives = 98/251 (39%), Gaps = 34/251 (13%)
Query: 88 NSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEP----K 143
NS+ C C + ++ RHV C C Y ++ D Q ++ P+
Sbjct: 204 NSRNITCITC-TDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQF--VHDPQLGYSLP 260
Query: 144 CPSVATPGQVKEL-----VEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPG- 197
C + +KEL + E + RY + + + M V+ CPRP C ++ EP
Sbjct: 261 CVAGCPNSLIKELHHFRILGEEQYNRYQQYGAEECVLQMGGVL-CPRPGCGAGLLPEPDQ 319
Query: 198 ----CTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRY 253
C G C FAFC C+ YH C E Y R
Sbjct: 320 RKVTCEGGNGLGCGFAFCRECKEAYHE-GECSAVFEASGTTTQAY-------------RV 365
Query: 254 GKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMGSL 311
+R ++A E SKE ++K +K CP C P+EK GC M C C +CW C
Sbjct: 366 DERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEW 425
Query: 312 SRANPYKHFND 322
+R H+ D
Sbjct: 426 NRVCMGDHWFD 436
>gi|169790969 parkin isoform 1 [Homo sapiens]
Length = 465
Score = 76.6 bits (187), Expect = 3e-14
Identities = 68/251 (27%), Positives = 98/251 (39%), Gaps = 34/251 (13%)
Query: 88 NSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEP----K 143
NS+ C C + ++ RHV C C Y ++ D Q ++ P+
Sbjct: 232 NSRNITCITC-TDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQF--VHDPQLGYSLP 288
Query: 144 CPSVATPGQVKEL-----VEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPG- 197
C + +KEL + E + RY + + + M V+ CPRP C ++ EP
Sbjct: 289 CVAGCPNSLIKELHHFRILGEEQYNRYQQYGAEECVLQMGGVL-CPRPGCGAGLLPEPDQ 347
Query: 198 ----CTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRY 253
C G C FAFC C+ YH C E Y R
Sbjct: 348 RKVTCEGGNGLGCGFAFCRECKEAYHE-GECSAVFEASGTTTQAY-------------RV 393
Query: 254 GKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMGSL 311
+R ++A E SKE ++K +K CP C P+EK GC M C C +CW C
Sbjct: 394 DERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEW 453
Query: 312 SRANPYKHFND 322
+R H+ D
Sbjct: 454 NRVCMGDHWFD 464
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 76.3 bits (186), Expect = 4e-14
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 27/226 (11%)
Query: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQV 153
C +C + C H C CL+ Y I+I + +V ++CPE C P +
Sbjct: 132 CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVN-ISCPE--CTERFNPHDI 188
Query: 154 KELVEAE-LFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQE--PGCTMGICS--SCNF 208
+ ++ + L +Y+ +L+ L D +CP P C V+ C C C
Sbjct: 189 RLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCGT 248
Query: 209 AFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESK 268
FC C+ +H C D A + + + ++ +
Sbjct: 249 EFCYHCKQIWHPNQTC-----------------DAARQERAQSLRLRTIRSSSISYSQES 291
Query: 269 EWLEKNSKSCPCCGTPIEKLD--GCNKMTCTGCMQYFCWICMGSLS 312
+ K CP C I K++ CN MTC C FCW+CM +S
Sbjct: 292 GAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEIS 337
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 76.3 bits (186), Expect = 4e-14
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 27/226 (11%)
Query: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQV 153
C +C + C H C CL+ Y I+I + +V ++CPE C P +
Sbjct: 132 CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVN-ISCPE--CTERFNPHDI 188
Query: 154 KELVEAE-LFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQE--PGCTMGICS--SCNF 208
+ ++ + L +Y+ +L+ L D +CP P C V+ C C C
Sbjct: 189 RLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCGT 248
Query: 209 AFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESK 268
FC C+ +H C D A + + + ++ +
Sbjct: 249 EFCYHCKQIWHPNQTC-----------------DAARQERAQSLRLRTIRSSSISYSQES 291
Query: 269 EWLEKNSKSCPCCGTPIEKLD--GCNKMTCTGCMQYFCWICMGSLS 312
+ K CP C I K++ CN MTC C FCW+CM +S
Sbjct: 292 GAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEIS 337
>gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1
isoform 1 [Homo sapiens]
Length = 468
Score = 68.2 bits (165), Expect = 1e-11
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 27/232 (11%)
Query: 82 QQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCP- 140
Q+ N++ C +C+ E + EC H +C+ CL+ IR+ Q ++CP
Sbjct: 228 QRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQG----TIRNSQEAEVSCPF 283
Query: 141 ---EPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPG 197
C ++K L+ E + R+ L + + + A +C P C+ E
Sbjct: 284 IDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDD 343
Query: 198 CTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRV 257
C C C LC+ + ++ CK E L LR Q D A ++ + +
Sbjct: 344 VNEFTCPVCFHVNCLLCKAIHEQMN-CKEYQEDLA-LR---AQNDVAARQTTE------M 392
Query: 258 IQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMG 309
++ L++ E+ CP C ++K DGC+ + CT C CW+ G
Sbjct: 393 LKVMLQQGEAMR--------CPQCQIVVQKKDGCDWIRCTVCHTEICWVTKG 436
>gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1
isoform 2 [Homo sapiens]
Length = 510
Score = 68.2 bits (165), Expect = 1e-11
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 27/232 (11%)
Query: 82 QQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCP- 140
Q+ N++ C +C+ E + EC H +C+ CL+ IR+ Q ++CP
Sbjct: 270 QRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQG----TIRNSQEAEVSCPF 325
Query: 141 ---EPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPG 197
C ++K L+ E + R+ L + + + A +C P C+ E
Sbjct: 326 IDNTYSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDD 385
Query: 198 CTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRV 257
C C C LC+ + ++ CK E L LR Q D A ++ + +
Sbjct: 386 VNEFTCPVCFHVNCLLCKAIHEQMN-CKEYQEDLA-LR---AQNDVAARQTTE------M 434
Query: 258 IQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMG 309
++ L++ E+ CP C ++K DGC+ + CT C CW+ G
Sbjct: 435 LKVMLQQGEAMR--------CPQCQIVVQKKDGCDWIRCTVCHTEICWVTKG 478
>gi|46370057 ring finger protein 216 isoform b [Homo sapiens]
Length = 866
Score = 63.9 bits (154), Expect = 2e-10
Identities = 72/287 (25%), Positives = 115/287 (40%), Gaps = 47/287 (16%)
Query: 51 VDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFL 110
V QE+ E+ ++++ + + L ++ Q K + +L C C+ E E
Sbjct: 475 VQQEQEFYEQKIKEMAEHEDFLLA-LQMNEEQYQK--DGQLIECRCCYGEFPFEELTQCA 531
Query: 111 ECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCP-SVATPGQVKELVEAELFARYDRLL 169
+ H++CK CL Y + + L+C E C S T K L + L+ Y+R
Sbjct: 532 DA-HLFCKECLIRYAQEAVFGSGKLELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKA 590
Query: 170 LQSSLDLMAD-VVYCPRPCCQLPVMQEPGCTMGICSS--CNFAFCTLCRLTY--HGVSPC 224
+ AD +V CP C P + + C + C C C+ + H C
Sbjct: 591 EEEVAAAYADELVRCPS--CSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKEHNGLTC 648
Query: 225 KVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTP 284
+ AEK D+ R ++EE + + K C CGT
Sbjct: 649 EELAEK-----------DDIKYRT------------SIEEKMTAARIRK----CHKCGTG 681
Query: 285 IEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF----NDPGSPC 327
+ K +GCN+M+C C C++C S+ N Y HF PG+PC
Sbjct: 682 LIKSEGCNRMSCR-CGAQMCYLCRVSI---NGYDHFCQHPRSPGAPC 724
>gi|46358403 ring finger protein 216 isoform a [Homo sapiens]
Length = 923
Score = 63.9 bits (154), Expect = 2e-10
Identities = 72/287 (25%), Positives = 115/287 (40%), Gaps = 47/287 (16%)
Query: 51 VDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFL 110
V QE+ E+ ++++ + + L ++ Q K + +L C C+ E E
Sbjct: 532 VQQEQEFYEQKIKEMAEHEDFLLA-LQMNEEQYQK--DGQLIECRCCYGEFPFEELTQCA 588
Query: 111 ECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCP-SVATPGQVKELVEAELFARYDRLL 169
+ H++CK CL Y + + L+C E C S T K L + L+ Y+R
Sbjct: 589 DA-HLFCKECLIRYAQEAVFGSGKLELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKA 647
Query: 170 LQSSLDLMAD-VVYCPRPCCQLPVMQEPGCTMGICSS--CNFAFCTLCRLTY--HGVSPC 224
+ AD +V CP C P + + C + C C C+ + H C
Sbjct: 648 EEEVAAAYADELVRCPS--CSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKEHNGLTC 705
Query: 225 KVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTP 284
+ AEK D+ R ++EE + + K C CGT
Sbjct: 706 EELAEK-----------DDIKYRT------------SIEEKMTAARIRK----CHKCGTG 738
Query: 285 IEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF----NDPGSPC 327
+ K +GCN+M+C C C++C S+ N Y HF PG+PC
Sbjct: 739 LIKSEGCNRMSCR-CGAQMCYLCRVSI---NGYDHFCQHPRSPGAPC 781
>gi|22749145 ring finger protein 217 [Homo sapiens]
Length = 275
Score = 48.9 bits (115), Expect = 7e-06
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 27/105 (25%)
Query: 203 CSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKAL 262
C +C F +C C +H CK + + G ++++
Sbjct: 83 CPTCQFVWCFKCHSPWHEGVNCK------------------------EYKKGDKLLRHWA 118
Query: 263 EEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWIC 307
E+E + +N++ CP C I++ +GC+ MTC+ C FC+ C
Sbjct: 119 SEIEHGQ---RNAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRC 160
Score = 35.4 bits (80), Expect = 0.076
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 133 QVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDL---MADVVYCPRPCCQ 189
++QC C C +P E V + + + D+LL + ++ + CP+ C+
Sbjct: 80 KIQCPTCQFVWCFKCHSPWH--EGVNCKEYKKGDKLLRHWASEIEHGQRNAQKCPK--CK 135
Query: 190 LPVMQEPGCTMGICSSCNFAFCTLCRLTY 218
+ + + GC CS CN FC C Y
Sbjct: 136 IHIQRTEGCDHMTCSQCNTNFCYRCGERY 164
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 47.4 bits (111), Expect = 2e-05
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%)
Query: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG-- 151
C++C + C C C + +F I +++ + + CP P +
Sbjct: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
Query: 152 ---------QVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGI 202
Q++E +E + +A + + L + L ++C + C + E
Sbjct: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQ--CSFGFIYEREQLEAT 816
Query: 203 CSSCNFAFCTLCRLTY---HGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQ 259
C C+ FC C+ + H C+ D +N KR+ D Y + +
Sbjct: 817 CPQCHQTFCVRCKRQWEEQHRGRSCE-------DFQNW--------KRMNDPEYQAQGLA 861
Query: 260 KALEEMESKEWLEKNSKSCPCCGTPIE-KLDGCNKMTCTGCMQYFCWICMGSLSRAN 315
+L++N CP C GC CT C FC C + N
Sbjct: 862 M---------YLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKN 909
>gi|117606347 F-box protein 43 isoform a [Homo sapiens]
Length = 674
Score = 47.0 bits (110), Expect = 3e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 176 LMADVVYCPRPCCQLPVMQEPGCTMGICS--SCNFAFCTLCRLTYHGVSPCKVTAEKLMD 233
L D P P CQ P +P G+CS +C F FC LC YHG C A K +
Sbjct: 597 LFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRN 656
Query: 234 LRNEYLQADEANKRLL 249
R + L +KR L
Sbjct: 657 -RKDALPGSAQSKRNL 671
>gi|117606351 F-box protein 43 isoform b [Homo sapiens]
Length = 708
Score = 47.0 bits (110), Expect = 3e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 176 LMADVVYCPRPCCQLPVMQEPGCTMGICS--SCNFAFCTLCRLTYHGVSPCKVTAEKLMD 233
L D P P CQ P +P G+CS +C F FC LC YHG C A K +
Sbjct: 631 LFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRN 690
Query: 234 LRNEYLQADEANKRLL 249
R + L +KR L
Sbjct: 691 -RKDALPGSAQSKRNL 705
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 41.6 bits (96), Expect = 0.001
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 22/147 (14%)
Query: 183 CPRPCCQLPVMQEPGCTMGICSS----CNFAFCTLCRLTYHG------VSPCKVTAEKLM 232
CP Q P + +C S + FCT C YHG V+P K +
Sbjct: 327 CPEHIDQAPERSKEDANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCP 386
Query: 233 DLR--NEYLQADEANKRLL----DQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIE 286
+ + Q+ E +K L+ D+ Y +Q ++ + + W KN + C CGT
Sbjct: 387 ECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICIECGTRSS 446
Query: 287 KLDGCNKMTCTGCMQY------FCWIC 307
N + C C Q FC C
Sbjct: 447 SQWHHNCLICDNCYQQQDNLCPFCGKC 473
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 20/145 (13%)
Query: 83 QIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEP 142
+++ + + +CSIC +C L C H +C+ CL++Y Q L+CP
Sbjct: 11 EVQPMDKQFLVCSICLDRY---QCPKVLPCLHTFCERCLQNYI-----PAQSLTLSCPVC 62
Query: 143 KCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMAD-------VVYCPRPCCQLPVMQE 195
+ S+ P Q ++ F +Q + D D V RP L
Sbjct: 63 RQTSI-LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRP---LSCPNH 118
Query: 196 PGCTMGI-CSSCNFAFCTLCRLTYH 219
G TM C +C A C CR H
Sbjct: 119 EGKTMEFYCEACETAMCGECRAGEH 143
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 20/145 (13%)
Query: 83 QIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEP 142
+++ + + +CSIC +C L C H +C+ CL++Y Q L+CP
Sbjct: 11 EVQPMDKQFLVCSICLDRY---QCPKVLPCLHTFCERCLQNYI-----PAQSLTLSCPVC 62
Query: 143 KCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMAD-------VVYCPRPCCQLPVMQE 195
+ S+ P Q ++ F +Q + D D V RP L
Sbjct: 63 RQTSI-LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRP---LSCPNH 118
Query: 196 PGCTMGI-CSSCNFAFCTLCRLTYH 219
G TM C +C A C CR H
Sbjct: 119 EGKTMEFYCEACETAMCGECRAGEH 143
>gi|56605981 tripartite motif-containing 72 [Homo sapiens]
Length = 477
Score = 35.4 bits (80), Expect = 0.076
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Query: 111 ECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCP-SVATPGQVKELVEAELFARYDRLL 169
EC H +C+ACL DG V C C P P +++T Q+ LVE A+ +
Sbjct: 28 ECGHSFCRACLGRVAGEPAADGTVLCPCCQAPTRPQALSTNLQLARLVEG--LAQVPQGH 85
Query: 170 LQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSS 205
+ LD ++ +YC Q+ G+C+S
Sbjct: 86 CEEHLDPLS--IYCE---------QDRALVCGVCAS 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,388,553
Number of Sequences: 37866
Number of extensions: 666689
Number of successful extensions: 2870
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 2676
Number of HSP's gapped (non-prelim): 207
length of query: 348
length of database: 18,247,518
effective HSP length: 103
effective length of query: 245
effective length of database: 14,347,320
effective search space: 3515093400
effective search space used: 3515093400
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.