Guide to the Human Genome
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Name: FBXO43 Sequence: fasta or formatted (708aa) NCBI GI: 117606351
Description:

F-box protein 43 isoform b

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [674aa] F-box protein 43 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         37           4
 C cysteine            3.1         22           1
 D aspartate           4.9         35           2
 E glutamate           8.1         57           3
 F phenylalanine       3.5         25           1
 G glycine             5.5         39           1
 H histidine           1.7         12           1
 I isoleucine          4.4         31           1
 K lysine              8.3         59           3
 L leucine            10.5         74           2
 M methionine          0.7          5           1
 N asparagine          4.1         29           2
 P proline             4.2         30           2
 Q glutamine           4.7         33           2
 R arginine            5.6         40           3
 S serine             13.4         95           3
 T threonine           6.1         43           2
 V valine              4.0         28           2
 W tryptophan          0.4          3           1
 Y tyrosine            1.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 43 isoform b 
FBXO43                0.953   F-box protein 43 isoform a 
FBXO5                 0.090   F-box only protein 5 isoform b 
FBXO5                 0.090   F-box only protein 5 isoform a 
RNF14                 0.016   ring finger protein 14 isoform 1 
RNF14                 0.016   ring finger protein 14 isoform 1 
RNF14                 0.016   ring finger protein 14 isoform 1 
RNF14                 0.016   ring finger protein 14 isoform 2 
RNF14                 0.016   ring finger protein 14 isoform 1 
ANLN                  0.010   anillin, actin binding protein 
SFRS18                0.009   splicing factor, arginine/serine-rich 130 
SFRS18                0.009   splicing factor, arginine/serine-rich 130 
ARL6IP4               0.009   SRp25 nuclear protein isoform 4 
ARL6IP4               0.009   SRp25 nuclear protein isoform 2 
ANKIB1                0.008   ankyrin repeat and IBR domain containing 1 
GOLGA2                0.007   Golgi autoantigen, golgin subfamily a, 2 
C2orf21               0.007   chromosome 2 open reading frame 21 isoform 1 
PPP1R12A              0.007   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.007   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.007   protein phosphatase 1, regulatory (inhibitor) subunit...
ATF7IP                0.007   activating transcription factor 7 interacting protei...
PEX19                 0.007   peroxisomal biogenesis factor 19 isoform a 
RAI14                 0.007   retinoic acid induced 14 isoform d 
RAI14                 0.007   retinoic acid induced 14 isoform c 
RAI14                 0.007   retinoic acid induced 14 isoform b 
RAI14                 0.007   retinoic acid induced 14 isoform a 
RAI14                 0.007   retinoic acid induced 14 isoform a 
RAI14                 0.007   retinoic acid induced 14 isoform a 
RNF19A                0.007   ring finger protein 19 
RNF19A                0.007   ring finger protein 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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