DDB1 4472

Name: DDB1	Sequence: fasta or formatted (1140aa)		NCBI GI: 148529014
Description: damage-specific DNA binding protein 1		Referenced in: Cullins and SCF Complexes DNases, Recombination, and DNA Repair Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 59 2 C cysteine 1.9 22 1 D aspartate 4.8 55 3 E glutamate 8.0 91 2 F phenylalanine 4.0 46 2 G glycine 7.2 82 2 H histidine 2.5 28 1 I isoleucine 6.3 72 3 K lysine 4.7 54 2 L leucine 11.0 125 3 M methionine 2.4 27 1 N asparagine 4.7 54 2 P proline 3.6 41 2 Q glutamine 4.1 47 2 R arginine 4.2 48 1 S serine 7.5 85 3 T threonine 6.1 70 2 V valine 8.0 91 3 W tryptophan 0.7 8 1 Y tyrosine 3.1 35 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 damage-specific DNA binding protein 1 LOC100290337 1.000 PREDICTED: hypothetical protein XP_002347285 SF3B3 0.086 splicing factor 3b, subunit 3 CPSF1 0.027 cleavage and polyadenylation specific factor 1, 160k... LOC729792 0.004 PREDICTED: hypothetical protein LOC729792 0.004 PREDICTED: hypothetical protein LOC729792 0.004 PREDICTED: hypothetical protein LOC100294501 0.004 PREDICTED: hypothetical protein LOC100294249 0.004 PREDICTED: hypothetical protein XP_002344067 LOC100294238 0.004 PREDICTED: hypothetical protein LOC100294204 0.004 PREDICTED: hypothetical protein LOC100294136 0.004 PREDICTED: hypothetical protein LOC100294091 0.004 PREDICTED: hypothetical protein LOC730401 0.004 PREDICTED: hypothetical protein RLIM 0.003 ring finger protein, LIM domain interacting RLIM 0.003 ring finger protein, LIM domain interacting PAFAH1B1 0.003 platelet-activating factor acetylhydrolase, isoform I... SPATA21 0.003 spermatogenesis associated 21 PREX1 0.003 phosphatidylinositol-3,4,5-trisphosphate-dependent R... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.