PKP4 32424

Name: PKP4	Sequence: fasta or formatted (1192aa)		NCBI GI: 53829374
Description: plakophilin 4 isoform a		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1149aa] plakophilin 4 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 77 3 C cysteine 1.2 14 2 D aspartate 4.7 56 3 E glutamate 5.0 60 2 F phenylalanine 1.6 19 1 G glycine 6.1 73 2 H histidine 2.2 26 1 I isoleucine 3.3 39 2 K lysine 4.2 50 7 L leucine 8.6 103 2 M methionine 1.7 20 1 N asparagine 4.9 58 2 P proline 6.6 79 2 Q glutamine 6.1 73 3 R arginine 7.1 85 2 S serine 12.2 145 3 T threonine 6.7 80 2 V valine 6.3 75 2 W tryptophan 0.9 11 1 Y tyrosine 4.1 49 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 plakophilin 4 isoform a PKP4 0.928 plakophilin 4 isoform b CTNND2 0.447 catenin (cadherin-associated protein), delta 2 (neur... ARVCF 0.189 armadillo repeat protein CTNND1 0.177 catenin, delta 1 isoform 3A CTNND1 0.177 catenin, delta 1 isoform 3A CTNND1 0.177 catenin, delta 1 isoform 3A CTNND1 0.177 catenin, delta 1 isoform 3B CTNND1 0.177 catenin, delta 1 isoform 3AB CTNND1 0.177 catenin, delta 1 isoform 1A CTNND1 0.177 catenin, delta 1 isoform 1A CTNND1 0.177 catenin, delta 1 isoform 1A CTNND1 0.177 catenin, delta 1 isoform 1B CTNND1 0.177 catenin, delta 1 isoform 1AB CTNND1 0.175 catenin, delta 1 isoform 3AC CTNND1 0.175 catenin, delta 1 isoform 3ABC CTNND1 0.175 catenin, delta 1 isoform 1ABC PKP2 0.114 plakophilin 2 isoform 2a PKP2 0.105 plakophilin 2 isoform 2b PKP1 0.105 plakophilin 1 isoform 1a LOC652798 0.105 PREDICTED: similar to plakophilin 1, partial PKP1 0.100 plakophilin 1 isoform 1b PKP3 0.099 plakophilin 3 MUC21 0.010 mucin 21 APC 0.009 adenomatous polyposis coli APC 0.009 adenomatous polyposis coli APC 0.009 adenomatous polyposis coli SP4 0.009 Sp4 transcription factor ANKAR 0.009 ankyrin and armadillo repeat containing ARMC3 0.009 armadillo repeat containing 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.