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Search of human proteins with 34305295
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34305295 ring finger protein 6 [Homo sapiens]
(685 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174653 ring finger protein 6 [Homo sapiens] 1379 0.0
gi|34305295 ring finger protein 6 [Homo sapiens] 1379 0.0
gi|34305293 ring finger protein 6 [Homo sapiens] 1379 0.0
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 427 e-119
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 427 e-119
gi|7662486 ring finger protein 44 [Homo sapiens] 77 5e-14
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 75 2e-13
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 75 2e-13
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 75 2e-13
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 75 2e-13
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 75 2e-13
gi|14149702 ring finger protein 167 [Homo sapiens] 73 1e-12
gi|37622894 ring finger protein 126 [Homo sapiens] 69 2e-11
gi|29788758 ring finger protein 130 [Homo sapiens] 66 9e-11
gi|7657520 ring finger protein 11 [Homo sapiens] 63 8e-10
gi|34577087 ring finger protein 13 [Homo sapiens] 63 1e-09
gi|6005864 ring finger protein 13 [Homo sapiens] 63 1e-09
gi|33859668 Rabring 7 [Homo sapiens] 63 1e-09
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 62 2e-09
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 62 2e-09
gi|150378447 zinc and ring finger 3 [Homo sapiens] 61 4e-09
gi|56711322 ring finger protein 43 [Homo sapiens] 60 5e-09
gi|38045931 ring finger protein 122 [Homo sapiens] 59 1e-08
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 59 1e-08
gi|21539663 praja 1 isoform c [Homo sapiens] 59 2e-08
gi|74048537 praja 1 isoform b [Homo sapiens] 59 2e-08
gi|41281725 praja 1 isoform a [Homo sapiens] 59 2e-08
gi|57165361 ring finger protein 165 [Homo sapiens] 58 3e-08
gi|37595553 ring finger protein 111 [Homo sapiens] 58 3e-08
gi|58331204 ring finger protein 150 [Homo sapiens] 58 3e-08
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 1379 bits (3569), Expect = 0.0
Identities = 685/685 (100%), Positives = 685/685 (100%)
Query: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL
Sbjct: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
Query: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT
Sbjct: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
Query: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD
Sbjct: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
Query: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG
Sbjct: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
Query: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP
Sbjct: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
Query: 301 IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR 360
IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR
Sbjct: 301 IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR 360
Query: 361 GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR 420
GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR
Sbjct: 361 GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR 420
Query: 421 TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL 480
TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL
Sbjct: 421 TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL 480
Query: 481 RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR 540
RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR
Sbjct: 481 RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR 540
Query: 541 QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD 600
QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD
Sbjct: 541 QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD 600
Query: 601 DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID
Sbjct: 601 DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
Query: 661 RWLSENCTCPICRQPVLGSNIANNG 685
RWLSENCTCPICRQPVLGSNIANNG
Sbjct: 661 RWLSENCTCPICRQPVLGSNIANNG 685
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 1379 bits (3569), Expect = 0.0
Identities = 685/685 (100%), Positives = 685/685 (100%)
Query: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL
Sbjct: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
Query: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT
Sbjct: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
Query: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD
Sbjct: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
Query: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG
Sbjct: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
Query: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP
Sbjct: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
Query: 301 IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR 360
IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR
Sbjct: 301 IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR 360
Query: 361 GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR 420
GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR
Sbjct: 361 GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR 420
Query: 421 TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL 480
TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL
Sbjct: 421 TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL 480
Query: 481 RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR 540
RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR
Sbjct: 481 RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR 540
Query: 541 QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD 600
QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD
Sbjct: 541 QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD 600
Query: 601 DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID
Sbjct: 601 DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
Query: 661 RWLSENCTCPICRQPVLGSNIANNG 685
RWLSENCTCPICRQPVLGSNIANNG
Sbjct: 661 RWLSENCTCPICRQPVLGSNIANNG 685
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 1379 bits (3569), Expect = 0.0
Identities = 685/685 (100%), Positives = 685/685 (100%)
Query: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL
Sbjct: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
Query: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT
Sbjct: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
Query: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD
Sbjct: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
Query: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG
Sbjct: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
Query: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP
Sbjct: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
Query: 301 IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR 360
IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR
Sbjct: 301 IRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERR 360
Query: 361 GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR 420
GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR
Sbjct: 361 GTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANR 420
Query: 421 TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL 480
TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL
Sbjct: 421 TRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVAL 480
Query: 481 RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR 540
RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR
Sbjct: 481 RSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDR 540
Query: 541 QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD 600
QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD
Sbjct: 541 QAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDD 600
Query: 601 DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID
Sbjct: 601 DRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
Query: 661 RWLSENCTCPICRQPVLGSNIANNG 685
RWLSENCTCPICRQPVLGSNIANNG
Sbjct: 661 RWLSENCTCPICRQPVLGSNIANNG 685
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 427 bits (1097), Expect = e-119
Identities = 285/704 (40%), Positives = 373/704 (52%), Gaps = 112/704 (15%)
Query: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
M S S G +++ Q RR Q +RL REEA+YQF+N L++EDYRLMRD+NL
Sbjct: 1 MENSDSNDKGSGDQSAAQ--------RRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNL 52
Query: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
LGTPGE T EEL +RL +KE P ++ R + + S+ DS+++WLN+ R+T
Sbjct: 53 LGTPGESTEEELLRRLQQIKEG----PPPQNSDENRGGDSSDDVSNGDSIIDWLNSVRQT 108
Query: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
GN TRSGQ GNQ+WRAVSRTNPN+G+FRFSLEI+V NR+
Sbjct: 109 GNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINV----------------------NRN 146
Query: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
+ + + P ARR+ + N + PR+
Sbjct: 147 NGSQNSENENEPSARRSSGENVENNSQRQVENPRSE------------------------ 182
Query: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
+ ++R + S + +E+ GQR + ++ R T R E
Sbjct: 183 -------STSARPSRSERNSTEALTEVPPTRGQRRARSRSPDH--------RRTRARAE- 226
Query: 301 IRLRSTSNSRSRSPIQRQSGTVYHN--SQRESRPVQQTTRRSVRRRGRTRVFLEQDRERE 358
RS S S I R+S +H+ SQ P+ T S R R + +Q E
Sbjct: 227 ---RSRSPLHPMSEIPRRS---HHSISSQTFEHPLVNETEGSSRTRHHVTL-RQQISGPE 279
Query: 359 RRGTAYTPFSNSRLVSRITVEEGEESSRSSTAV-RRHPTITLDLQVRRIRPGENRDRDSI 417
S +R S+ +S ST +R PTI LDLQVRR+RPGE R RDSI
Sbjct: 280 LLSRGLFAASGTRNASQGAGSSDTAASGESTGSGQRPPTIVLDLQVRRVRPGEYRQRDSI 339
Query: 418 ANRTRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSS 477
A+RTRSR NTVT ES GGFRRT SR ER+G+RTYVSTI +P+RRI L E +S
Sbjct: 340 ASRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTS 399
Query: 478 VALRSILRQIMTGFGELSSLMEADSESE-----LQRNGQHLPDMH------------SEL 520
VA++++LRQIMTGFGELS M +DS+SE RN + S
Sbjct: 400 VAIQTMLRQIMTGFGELSYFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSS 459
Query: 521 SNLGTDNNRSQHREGSSQDRQAQGDSTE-----MHGENETTQPHTRNSDSRGGRQLRNPN 575
S+ + ++ S SS + G+S+E G NE + + R GR R P
Sbjct: 460 SSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEGSSSSGSSGARREGRH-RAPV 518
Query: 576 NLVETGTLPILRLAHFFLLNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVC 635
E+G+LP L LA FFLLNE DDDD+ RGLTKEQIDNL+ R + N + K CSVC
Sbjct: 519 TFDESGSLPFLSLAQFFLLNE-DDDDQPRGLTKEQIDNLAMRSFGEN----DALKTCSVC 573
Query: 636 ISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGS 679
I++Y GNKLR+LPC HE+H+HCIDRWLSEN TCPICR+ VL S
Sbjct: 574 ITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 617
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 427 bits (1097), Expect = e-119
Identities = 285/704 (40%), Positives = 373/704 (52%), Gaps = 112/704 (15%)
Query: 1 MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL 60
M S S G +++ Q RR Q +RL REEA+YQF+N L++EDYRLMRD+NL
Sbjct: 1 MENSDSNDKGSGDQSAAQ--------RRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNL 52
Query: 61 LGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRT 120
LGTPGE T EEL +RL +KE P ++ R + + S+ DS+++WLN+ R+T
Sbjct: 53 LGTPGESTEEELLRRLQQIKEG----PPPQNSDENRGGDSSDDVSNGDSIIDWLNSVRQT 108
Query: 121 GNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRD 180
GN TRSGQ GNQ+WRAVSRTNPN+G+FRFSLEI+V NR+
Sbjct: 109 GNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINV----------------------NRN 146
Query: 181 HTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIG 240
+ + + P ARR+ + N + PR+
Sbjct: 147 NGSQNSENENEPSARRSSGENVENNSQRQVENPRSE------------------------ 182
Query: 241 GAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEP 300
+ ++R + S + +E+ GQR + ++ R T R E
Sbjct: 183 -------STSARPSRSERNSTEALTEVPPTRGQRRARSRSPDH--------RRTRARAE- 226
Query: 301 IRLRSTSNSRSRSPIQRQSGTVYHN--SQRESRPVQQTTRRSVRRRGRTRVFLEQDRERE 358
RS S S I R+S +H+ SQ P+ T S R R + +Q E
Sbjct: 227 ---RSRSPLHPMSEIPRRS---HHSISSQTFEHPLVNETEGSSRTRHHVTL-RQQISGPE 279
Query: 359 RRGTAYTPFSNSRLVSRITVEEGEESSRSSTAV-RRHPTITLDLQVRRIRPGENRDRDSI 417
S +R S+ +S ST +R PTI LDLQVRR+RPGE R RDSI
Sbjct: 280 LLSRGLFAASGTRNASQGAGSSDTAASGESTGSGQRPPTIVLDLQVRRVRPGEYRQRDSI 339
Query: 418 ANRTRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSS 477
A+RTRSR NTVT ES GGFRRT SR ER+G+RTYVSTI +P+RRI L E +S
Sbjct: 340 ASRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTS 399
Query: 478 VALRSILRQIMTGFGELSSLMEADSESE-----LQRNGQHLPDMH------------SEL 520
VA++++LRQIMTGFGELS M +DS+SE RN + S
Sbjct: 400 VAIQTMLRQIMTGFGELSYFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSS 459
Query: 521 SNLGTDNNRSQHREGSSQDRQAQGDSTE-----MHGENETTQPHTRNSDSRGGRQLRNPN 575
S+ + ++ S SS + G+S+E G NE + + R GR R P
Sbjct: 460 SSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEGSSSSGSSGARREGRH-RAPV 518
Query: 576 NLVETGTLPILRLAHFFLLNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVC 635
E+G+LP L LA FFLLNE DDDD+ RGLTKEQIDNL+ R + N + K CSVC
Sbjct: 519 TFDESGSLPFLSLAQFFLLNE-DDDDQPRGLTKEQIDNLAMRSFGEN----DALKTCSVC 573
Query: 636 ISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGS 679
I++Y GNKLR+LPC HE+H+HCIDRWLSEN TCPICR+ VL S
Sbjct: 574 ITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 617
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 77.0 bits (188), Expect = 5e-14
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 594 LNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHE 653
L E D + RGLTK I+ L + + +S SE +C VC SD+ LR LPC HE
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQ-TLCVVCFSDFEARQLLRVLPCNHE 401
Query: 654 FHIHCIDRWLSENCTCPICR 673
FH C+D+WL N TCPICR
Sbjct: 402 FHTKCVDKWLKANRTCPICR 421
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 75.1 bits (183), Expect = 2e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 353 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 411
Query: 664 SENCTCPICR 673
N TCPICR
Sbjct: 412 KANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 75.1 bits (183), Expect = 2e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 353 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 411
Query: 664 SENCTCPICR 673
N TCPICR
Sbjct: 412 KANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 75.1 bits (183), Expect = 2e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 386 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 444
Query: 664 SENCTCPICR 673
N TCPICR
Sbjct: 445 KANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 75.1 bits (183), Expect = 2e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 353 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 411
Query: 664 SENCTCPICR 673
N TCPICR
Sbjct: 412 KANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 75.1 bits (183), Expect = 2e-13
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 604 RGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWL 663
RGLTK I+ L + + N+ SE +C VC+ D+ + LR LPC HEFH C+D+WL
Sbjct: 436 RGLTKADIEQLPSYRFNPNNHQSEQ-TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 494
Query: 664 SENCTCPICR 673
N TCPICR
Sbjct: 495 KANRTCPICR 504
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 72.8 bits (177), Expect = 1e-12
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 606 LTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE 665
LTKEQ+ + T Y+ + +C++C+ +Y G+KLR LPC H +H C+D WL++
Sbjct: 208 LTKEQLKQIPTHDYQKG----DQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQ 263
Query: 666 -NCTCPICRQPV 676
TCPIC+QPV
Sbjct: 264 TRKTCPICKQPV 275
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 68.6 bits (166), Expect = 2e-11
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
KE+I L T + S G C VC DY G ++RQLPC H FH CI WL ++
Sbjct: 207 KEKIQALPTVPVTEEHVGS--GLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHD 264
Query: 668 TCPICRQPVLGSNIANN 684
+CP+CR+ + G N A N
Sbjct: 265 SCPVCRKSLTGQNTATN 281
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 66.2 bits (160), Expect = 9e-11
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 602 RIRGLTKEQIDNLSTRHYEHNSIDSELG-KICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
R+ K+ I L+TR + +++ C+VCI Y + +R LPC H FH C+D
Sbjct: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVD 292
Query: 661 RWLSENCTCPICRQPVL 677
WLSE+CTCP+C+ +L
Sbjct: 293 PWLSEHCTCPMCKLNIL 309
>gi|7657520 ring finger protein 11 [Homo sapiens]
Length = 154
Score = 63.2 bits (152), Expect = 8e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
C +C+ D+V G+ +R LPCMH +H+ CID WL + TCP C +PV
Sbjct: 99 CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSCMEPV 143
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 62.8 bits (151), Expect = 1e-09
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 606 LTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE 665
L K+Q+ L ++ + +C++C+ +Y G+KLR LPC H +H C+D WL++
Sbjct: 218 LRKDQLKKLPVHKFKKG----DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTK 273
Query: 666 -NCTCPICRQPVLGS 679
TCP+C+Q V+ S
Sbjct: 274 TKKTCPVCKQKVVPS 288
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 62.8 bits (151), Expect = 1e-09
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 606 LTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE 665
L K+Q+ L ++ + +C++C+ +Y G+KLR LPC H +H C+D WL++
Sbjct: 218 LRKDQLKKLPVHKFKKG----DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTK 273
Query: 666 -NCTCPICRQPVLGS 679
TCP+C+Q V+ S
Sbjct: 274 TKKTCPVCKQKVVPS 288
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 62.8 bits (151), Expect = 1e-09
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
KE+I +L T +D +G C VC DY ++RQLPC H FH CI WL +
Sbjct: 206 KEKITSLPTVTVTQEQVD--MGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHD 263
Query: 668 TCPICRQPVLGSN 680
TCP+CR+ + G +
Sbjct: 264 TCPVCRKSLNGED 276
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 62.0 bits (149), Expect = 2e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
C +C+ ++V G+ +R LPC H FH+ CID WL + TCP CR PV
Sbjct: 88 CVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCRGPV 132
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 62.0 bits (149), Expect = 2e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
C +C+ ++V G+ +R LPC H FH+ CID WL + TCP CR PV
Sbjct: 88 CVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCRGPV 132
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 60.8 bits (146), Expect = 4e-09
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 622 NSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
+++ S C++C+ Y+ G +LR +PC H FH C+D WL ++ TCP CR ++
Sbjct: 183 DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 238
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 60.5 bits (145), Expect = 5e-09
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 601 DRIRGLTKEQIDNLSTRHYE-----------HNSIDSELGKICSVCISDYVTGNKLRQLP 649
D ++ T I L+TR Y+ + +C++C+ ++ G +LR +
Sbjct: 230 DPLQQRTAWAISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVIS 289
Query: 650 CMHEFHIHCIDRWLSENCTCPIC 672
C+HEFH +C+D WL ++ TCP+C
Sbjct: 290 CLHEFHRNCVDPWLHQHRTCPLC 312
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 59.3 bits (142), Expect = 1e-08
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 629 GKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
G+ C+VC+ D+ ++L LPC H FH C+ +WL C CP+C +P+
Sbjct: 90 GQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPI 137
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 58.9 bits (141), Expect = 1e-08
Identities = 103/408 (25%), Positives = 145/408 (35%), Gaps = 38/408 (9%)
Query: 176 DSNRDHTANRQQ-RSTSPVAR---RTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFST 231
D + HT +R+ RS SP R+RS+T S S P+ R + Q S S
Sbjct: 470 DKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGR-SRSP 528
Query: 232 LGRLRNGIGGAAGIPRANASRTNFSSHTNQSGGSELRQ--REGQRFGAAHVWENGARSNV 289
R R+ G R+ ++ S + + G S R G+ +RS
Sbjct: 529 QRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRT 588
Query: 290 TVRNTNQRLEPIRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRV 349
R ++ P R RS RSR+P +R ++R SR TR VRRR R+R
Sbjct: 589 PARRRSRSRTPTRRRS----RSRTPARRGRSRSRTPARRRSR-----TRSPVRRRSRSR- 638
Query: 350 FLEQDRERERRGTAYTPFSNSRLVSRITVEEGEESS-----RSSTAVRRHPTITLDLQVR 404
R R + TP R SR G S RS + R P + R
Sbjct: 639 ---SPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSR 695
Query: 405 RIRPGENRDRDSI-ANRTRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVP 463
R G +R R + R+ SR S RT R RS + +
Sbjct: 696 TPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRIS 755
Query: 464 LRRISENELVEPSSVA-LRSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSN 522
RR L P S A R LR+ ++G ++ + R+G P S
Sbjct: 756 SRR--SRSLSSPRSKAKSRLSLRRSLSGSSPCPK-QKSQTPPRRSRSGSSQPKAKSR--- 809
Query: 523 LGTDNNRSQHREGSSQDRQAQGDSTEMHGENETTQPHTRNSDSRGGRQ 570
T RS+ SS Q T + ++ PH + RQ
Sbjct: 810 --TPPRRSR---SSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQ 852
Score = 52.8 bits (125), Expect = 1e-06
Identities = 70/279 (25%), Positives = 104/279 (37%), Gaps = 32/279 (11%)
Query: 158 ENRGFEIHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRL 217
+ RG G T+ + TA R RS+ ++R+ + SS + R
Sbjct: 1643 KGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKAR 1702
Query: 218 ASRGQNPAEGSFSTLGRLRNGIGGAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGA 277
SR A S T R + + + + SS +S S + +R +
Sbjct: 1703 LSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRS 1762
Query: 278 AHVWENG-----ARSNVTVRNTNQRLE-------PIRLRSTSNSRSRSPIQRQSGTVYHN 325
G +RS T +R + R R S SRSR +R+ G+ YH+
Sbjct: 1763 PSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHS 1822
Query: 326 SQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERRGTAYTPFSNSRLVSRITVEEGEESS 385
+ +T+ R RRRGR+R R+R R T+ P+ SR S
Sbjct: 1823 RSPARQESSRTSSR--RRRGRSRT-PPTSRKRSRSRTSPAPWKRSR-------------S 1866
Query: 386 RSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANRTRSR 424
R+S A R L RR +R R S +R RSR
Sbjct: 1867 RASPATHRRSRSRTPLISRR----RSRSRTSPVSRRRSR 1901
Score = 39.7 bits (91), Expect = 0.009
Identities = 74/293 (25%), Positives = 116/293 (39%), Gaps = 41/293 (13%)
Query: 173 PLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTL 232
P S D + + + ++ +P+ +R+RS +S + S PR R S +
Sbjct: 1553 PQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPR-RSRSGSSPEVKDKPRAA 1611
Query: 233 GRLRNGIGGA----AGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSN 288
R ++G + A PRA R+ S + G S EG + E+ +S
Sbjct: 1612 PRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSP----EGSSSTESSP-EHPPKSR 1666
Query: 289 VTVRNTNQRLEPIRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRS-VRRRGRT 347
R + EP ++SR+P +R R SR + TR++ + RR R+
Sbjct: 1667 TARRGSRSSPEP-------KTKSRTPPRR----------RSSRSSPELTRKARLSRRSRS 1709
Query: 348 RVFLEQDRERERRGTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIR 407
+ R R TP + R S ++ E E SRSS R + RR R
Sbjct: 1710 ASSSPETRSR-------TPPRHRRSPS-VSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761
Query: 408 PGENRDRDSIANRTRSRVGLAENTVTI--ESNSGGFRRTISRLERSGIRTYVS 458
+ R +R+RSR E T T SG + T R +RS R+ V+
Sbjct: 1762 SPSPKPRGLQRSRSRSR---REKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVT 1811
Score = 32.7 bits (73), Expect = 1.1
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 175 SDSNRDHTAN------RQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQ-NPAEG 227
S ++ DH ++ RQ S SP + +++SQTS S S+ P T LASR G
Sbjct: 1061 SQTSPDHRSDTSSPEVRQSHSESP-SLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRG 1119
Query: 228 SFSTLGRLRNGIGGAAGIPRANASRTNFSSHTNQSGGSELRQ 269
FS L++G+ P + +++ SS+ S L Q
Sbjct: 1120 EFSASPMLKSGMS-----PEQSRFQSDSSSYPTVDSNSLLGQ 1156
>gi|21539663 praja 1 isoform c [Homo sapiens]
Length = 455
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 382 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 439
Query: 665 ENCTCPICR 673
++ TCP+CR
Sbjct: 440 KSGTCPVCR 448
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 515 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 572
Query: 665 ENCTCPICR 673
++ TCP+CR
Sbjct: 573 KSGTCPVCR 581
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 570 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 627
Query: 665 ENCTCPICR 673
++ TCP+CR
Sbjct: 628 KSGTCPVCR 636
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 58.2 bits (139), Expect = 3e-08
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 625 DSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
+S+ + C++C+S G +R+LPCMH FH C+D+WL+ + CPICR
Sbjct: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 335
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 57.8 bits (138), Expect = 3e-08
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
C++C+S G +R+LPCMH FH C+D+WL N CPICR
Sbjct: 934 CTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 975
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 57.8 bits (138), Expect = 3e-08
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 577 LVETGTLPILRLAHFFLLNESDDDDRIRG-LTKEQIDNLSTRHYEHNSIDSELG-KICSV 634
++ L + F N D + R G K+ I L R + ++E C+V
Sbjct: 221 IISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAV 280
Query: 635 CISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
CI Y + +R LPC H FH C+D WL ++ TCP+C+ +L
Sbjct: 281 CIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNIL 323
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,620,521
Number of Sequences: 37866
Number of extensions: 1164073
Number of successful extensions: 4117
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 3669
Number of HSP's gapped (non-prelim): 472
length of query: 685
length of database: 18,247,518
effective HSP length: 109
effective length of query: 576
effective length of database: 14,120,124
effective search space: 8133191424
effective search space used: 8133191424
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.