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Search of human proteins with 33859668
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33859668 Rabring 7 [Homo sapiens]
(304 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33859668 Rabring 7 [Homo sapiens] 647 0.0
gi|37622894 ring finger protein 126 [Homo sapiens] 252 3e-67
gi|7706039 ring finger protein 181 [Homo sapiens] 81 1e-15
gi|21539663 praja 1 isoform c [Homo sapiens] 77 2e-14
gi|74048537 praja 1 isoform b [Homo sapiens] 77 2e-14
gi|41281725 praja 1 isoform a [Homo sapiens] 77 2e-14
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 75 5e-14
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 65 1e-10
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 65 1e-10
gi|29788758 ring finger protein 130 [Homo sapiens] 64 2e-10
gi|5174653 ring finger protein 6 [Homo sapiens] 63 4e-10
gi|34305295 ring finger protein 6 [Homo sapiens] 63 4e-10
gi|34305293 ring finger protein 6 [Homo sapiens] 63 4e-10
gi|29789407 ring finger protein 149 [Homo sapiens] 60 2e-09
gi|150378447 zinc and ring finger 3 [Homo sapiens] 60 2e-09
gi|21314654 ring finger protein 139 [Homo sapiens] 60 3e-09
gi|58331204 ring finger protein 150 [Homo sapiens] 60 3e-09
gi|38045931 ring finger protein 122 [Homo sapiens] 59 4e-09
gi|37675277 ring finger protein 148 [Homo sapiens] 59 5e-09
gi|7662486 ring finger protein 44 [Homo sapiens] 59 7e-09
gi|56711322 ring finger protein 43 [Homo sapiens] 58 9e-09
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 58 1e-08
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 58 1e-08
gi|14149702 ring finger protein 167 [Homo sapiens] 58 1e-08
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 57 2e-08
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 57 2e-08
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 57 2e-08
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 57 2e-08
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 57 2e-08
gi|21040269 ring finger protein 133 [Homo sapiens] 57 2e-08
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 647 bits (1668), Expect = 0.0
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MAEASAAGADSGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGG 60
MAEASAAGADSGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGG
Sbjct: 1 MAEASAAGADSGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGG 60
Query: 61 SRIDNTTTTHFAELWGHLDHTMFFQDFRPFLSSSPLDQDNRANERGHQTHTDFWGARPPR 120
SRIDNTTTTHFAELWGHLDHTMFFQDFRPFLSSSPLDQDNRANERGHQTHTDFWGARPPR
Sbjct: 61 SRIDNTTTTHFAELWGHLDHTMFFQDFRPFLSSSPLDQDNRANERGHQTHTDFWGARPPR 120
Query: 121 LPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYAW 180
LPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYAW
Sbjct: 121 LPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYAW 180
Query: 181 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEE 240
GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEE
Sbjct: 181 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEE 240
Query: 241 VRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEASASNRFSNDSQLHD 300
VRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEASASNRFSNDSQLHD
Sbjct: 241 VRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEASASNRFSNDSQLHD 300
Query: 301 RWTF 304
RWTF
Sbjct: 301 RWTF 304
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 252 bits (643), Expect = 3e-67
Identities = 141/306 (46%), Positives = 178/306 (58%), Gaps = 37/306 (12%)
Query: 19 RFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGGSRIDNTTTTHFAELWGHL 78
R+FCH C E+ P+LP+YICPRCESGFIEE+ +++ G + T L H+
Sbjct: 10 RYFCHCCSVEIVPRLPDYICPRCESGFIEELPEETRSTENGSAPSTAPTDQSRPPL-EHV 68
Query: 79 DHTMF-------------FQD------FRPFLSSSPLDQDNRANERGHQTHTDFWGARPP 119
D +F F D F P + ER H + + GAR P
Sbjct: 69 DQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPSRHRY-GARQP 127
Query: 120 RLPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYA 179
R L R R + R + P +EGI+Q + G + IP S P+ G+LHSNP DYA
Sbjct: 128 RARLTTR---RATGRHEGVPTLEGIIQQLVNGIITPATIP-SLGPW---GVLHSNPMDYA 180
Query: 180 WGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEE 239
WG GLDAI+TQLL Q ENTGPPPADKEKI +LPTV VT+E V GLECPVCK+DY + E
Sbjct: 181 WGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGE 240
Query: 240 EVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQ---------SQSTEASASN 290
VRQLPCNH FH CIVPWLE HD+CPVCRKSL G+++ S S+ +S+S+
Sbjct: 241 RVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSS 300
Query: 291 RFSNDS 296
SN++
Sbjct: 301 SPSNEN 306
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 81.3 bits (199), Expect = 1e-15
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260
PPPA K + +LP + Q + L+CPVC ++ EE ++PC+H FHSSCI+PWL
Sbjct: 51 PPPAAKTVVENLPRTVIRGSQAE--LKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLS 108
Query: 261 LHDTCPVCRKSLNGEDST----RQSQSTEASASNRFSN 294
++CP+CR L +D T R+ ++ + +R N
Sbjct: 109 KTNSCPLCRYELPTDDDTYEEHRRDKARKQQQQHRLEN 146
>gi|21539663 praja 1 isoform c [Homo sapiens]
Length = 455
Score = 76.6 bits (187), Expect = 2e-14
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259
PPA KE I +LP + VT++ +G E CP+C +Y E +LPC+H+FH C+ WL
Sbjct: 379 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 438
Query: 260 ELHDTCPVCR 269
+ TCPVCR
Sbjct: 439 QKSGTCPVCR 448
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 76.6 bits (187), Expect = 2e-14
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259
PPA KE I +LP + VT++ +G E CP+C +Y E +LPC+H+FH C+ WL
Sbjct: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571
Query: 260 ELHDTCPVCR 269
+ TCPVCR
Sbjct: 572 QKSGTCPVCR 581
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 76.6 bits (187), Expect = 2e-14
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259
PPA KE I +LP + VT++ +G E CP+C +Y E +LPC+H+FH C+ WL
Sbjct: 567 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 626
Query: 260 ELHDTCPVCR 269
+ TCPVCR
Sbjct: 627 QKSGTCPVCR 636
>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
Length = 708
Score = 75.5 bits (184), Expect = 5e-14
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259
PPA KE I LP V ++ +G E CP+C +Y ++ +LPC+HFFH C+ WL
Sbjct: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
Query: 260 ELHDTCPVCRK 270
+ TCPVCR+
Sbjct: 666 QKSGTCPVCRR 676
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 64.7 bits (156), Expect = 1e-10
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 206 KEKITSLPTVTVTQEQVDMGLE---CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELH 262
K+ I L T+ Q ++G + C VC E Y + VR L CNH FH +C+ PWL H
Sbjct: 252 KKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEH 311
Query: 263 DTCPVCR----KSLNGE-DSTRQSQSTEASASNRFSNDSQLHD 300
TCP+C+ K+L E D S S + SN SN + H+
Sbjct: 312 RTCPMCKCDILKALGIEVDVEDGSVSLQVPVSNEISNSASSHE 354
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 64.7 bits (156), Expect = 1e-10
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 206 KEKITSLPTVTVTQEQVDMGLE---CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELH 262
K+ I L T+ Q ++G + C VC E Y + VR L CNH FH +C+ PWL H
Sbjct: 226 KKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEH 285
Query: 263 DTCPVCR----KSLNGE-DSTRQSQSTEASASNRFSNDSQLHD 300
TCP+C+ K+L E D S S + SN SN + H+
Sbjct: 286 RTCPMCKCDILKALGIEVDVEDGSVSLQVPVSNEISNSASSHE 328
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 63.9 bits (154), Expect = 2e-10
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 204 ADKEKITSLPTVTVTQ--EQVDMGLE-CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260
A K+ I+ L T TV + ++ D + C VC E Y + VR LPC H FH SC+ PWL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLS 296
Query: 261 LHDTCPVCRKSL 272
H TCP+C+ ++
Sbjct: 297 EHCTCPMCKLNI 308
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 62.8 bits (151), Expect = 4e-10
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 206 KEKITSLPTVTVTQEQVD--MGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHD 263
KE+I +L T +D +G C VC DY ++RQLPC H FH CI WL +
Sbjct: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
Query: 264 TCPVCRKSLNGED 276
TCP+CR+ + G +
Sbjct: 668 TCPICRQPVLGSN 680
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 62.8 bits (151), Expect = 4e-10
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 206 KEKITSLPTVTVTQEQVD--MGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHD 263
KE+I +L T +D +G C VC DY ++RQLPC H FH CI WL +
Sbjct: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
Query: 264 TCPVCRKSLNGED 276
TCP+CR+ + G +
Sbjct: 668 TCPICRQPVLGSN 680
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 62.8 bits (151), Expect = 4e-10
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 206 KEKITSLPTVTVTQEQVD--MGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHD 263
KE+I +L T +D +G C VC DY ++RQLPC H FH CI WL +
Sbjct: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
Query: 264 TCPVCRKSLNGED 276
TCP+CR+ + G +
Sbjct: 668 TCPICRQPVLGSN 680
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 212 LPTVTVTQEQVDMGLE-CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
L TV ++ +D+ E C VC E++ V++ +R LPC H FH CI PWL H TCP+C+
Sbjct: 252 LHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCK 310
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 60.5 bits (145), Expect = 2e-09
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 227 ECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEA 286
+C +C E Y EE+R +PC H FH C+ PWL H TCP CR ++ + + E
Sbjct: 192 DCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVET 251
Query: 287 SASNR 291
S +R
Sbjct: 252 SNLSR 256
>gi|21314654 ring finger protein 139 [Homo sapiens]
Length = 664
Score = 59.7 bits (143), Expect = 3e-09
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 207 EKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCP 266
+KI SLP + ++ Q ++ C +C ++T + PCNH+FH+ C+ WL + DTCP
Sbjct: 527 KKINSLPEIKGSRLQ-EINDVCAICYHEFTTSARIT--PCNHYFHALCLRKWLYIQDTCP 583
Query: 267 VCRKSLNGEDSTRQSQS 283
+C + + ED + + +
Sbjct: 584 MCHQKVYIEDDIKDNSN 600
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 59.7 bits (143), Expect = 3e-09
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
C VC E Y + VR LPC H FH SC+ PWL H TCP+C+ ++
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 322
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 59.3 bits (142), Expect = 4e-09
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 225 GLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQS 281
G C VC ED+ ++E+ LPC H FH C+V WLE+ CP+C K + Q+
Sbjct: 90 GQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIASPSEATQN 146
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 58.9 bits (141), Expect = 5e-09
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 220 EQVDMGLE-CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
E++D+ + C VC + Y ++ VR L C HFFH +CI PWL H TCP+C+
Sbjct: 249 EELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCK 299
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 58.5 bits (140), Expect = 7e-09
Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 119 PRLPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSGMLHSNPGDY 178
PR +RYR + P P F +F S +P SP + L + D
Sbjct: 274 PRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFL-SMLPMSPTAMGPTISLDLDVDDV 332
Query: 179 AWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVE 238
+ + LG + G AD E++ S Q + L C VC D+
Sbjct: 333 EMENYEALLNLAERLGDAKPRGLTKADIEQLPSY-RFNPDSHQSEQTL-CVVCFSDFEAR 390
Query: 239 EEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
+ +R LPCNH FH+ C+ WL+ + TCP+CR
Sbjct: 391 QLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 58.2 bits (139), Expect = 9e-09
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQS 281
C +C E+++ +E+R + C H FH +C+ PWL H TCP+C ++ DS QS
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQS 325
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 57.8 bits (138), Expect = 1e-08
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 192 LLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFH 251
LL + ++ P KE+I +L + + D C VC +YT ++R+LPC+H +H
Sbjct: 536 LLNEDDDDQPRGLTKEQIDNLAMRSFGEN--DALKTCSVCITEYTEGNKLRKLPCSHEYH 593
Query: 252 SSCIVPWLELHDTCPVCRKSL 272
CI WL + TCP+CR+++
Sbjct: 594 VHCIDRWLSENSTCPICRRAV 614
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 57.8 bits (138), Expect = 1e-08
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 192 LLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFH 251
LL + ++ P KE+I +L + + D C VC +YT ++R+LPC+H +H
Sbjct: 536 LLNEDDDDQPRGLTKEQIDNLAMRSFGEN--DALKTCSVCITEYTEGNKLRKLPCSHEYH 593
Query: 252 SSCIVPWLELHDTCPVCRKSL 272
CI WL + TCP+CR+++
Sbjct: 594 VHCIDRWLSENSTCPICRRAV 614
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 57.8 bits (138), Expect = 1e-08
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 206 KEKITSLPTVTVTQ-EQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL-ELHD 263
KE++ +PT + +Q D+ C +C ++Y +++R LPC H +HS C+ PWL +
Sbjct: 210 KEQLKQIPTHDYQKGDQYDV---CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRK 266
Query: 264 TCPVCRKSLN----GEDSTRQSQSTE 285
TCP+C++ ++ ED ++Q E
Sbjct: 267 TCPICKQPVHRGPGDEDQEEETQGQE 292
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 189 VTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNH 248
+ + LG+ + G AD E++ S Q + L C VC D+ + +R LPCNH
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSY-RFNPNNHQSEQTL-CVVCMCDFESRQLLRVLPCNH 400
Query: 249 FFHSSCIVPWLELHDTCPVCR 269
FH+ C+ WL+ + TCP+CR
Sbjct: 401 EFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 189 VTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNH 248
+ + LG+ + G AD E++ S Q + L C VC D+ + +R LPCNH
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSY-RFNPNNHQSEQTL-CVVCMCDFESRQLLRVLPCNH 400
Query: 249 FFHSSCIVPWLELHDTCPVCR 269
FH+ C+ WL+ + TCP+CR
Sbjct: 401 EFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 189 VTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNH 248
+ + LG+ + G AD E++ S Q + L C VC D+ + +R LPCNH
Sbjct: 376 LAERLGEAKPRGLTKADIEQLPSY-RFNPNNHQSEQTL-CVVCMCDFESRQLLRVLPCNH 433
Query: 249 FFHSSCIVPWLELHDTCPVCR 269
FH+ C+ WL+ + TCP+CR
Sbjct: 434 EFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 189 VTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNH 248
+ + LG+ + G AD E++ S Q + L C VC D+ + +R LPCNH
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSY-RFNPNNHQSEQTL-CVVCMCDFESRQLLRVLPCNH 400
Query: 249 FFHSSCIVPWLELHDTCPVCR 269
FH+ C+ WL+ + TCP+CR
Sbjct: 401 EFHAKCVDKWLKANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 189 VTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNH 248
+ + LG+ + G AD E++ S Q + L C VC D+ + +R LPCNH
Sbjct: 426 LAERLGEAKPRGLTKADIEQLPSY-RFNPNNHQSEQTL-CVVCMCDFESRQLLRVLPCNH 483
Query: 249 FFHSSCIVPWLELHDTCPVCR 269
FH+ C+ WL+ + TCP+CR
Sbjct: 484 EFHAKCVDKWLKANRTCPICR 504
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 57.4 bits (137), Expect = 2e-08
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 225 GLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
G C +C E Y + VR L C HFFH +CI PW+ H TCP+C+
Sbjct: 253 GDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICK 297
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,018,381
Number of Sequences: 37866
Number of extensions: 719637
Number of successful extensions: 2236
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 2086
Number of HSP's gapped (non-prelim): 226
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.