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Search of human proteins with 33469978
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33469978 vesicle transport-related protein isoform b [Homo
sapiens]
(575 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33469978 vesicle transport-related protein isoform b [Homo sa... 1141 0.0
gi|33469966 vesicle transport-related protein isoform a [Homo sa... 1141 0.0
gi|18105063 vacuolar protein sorting 45A [Homo sapiens] 114 3e-25
gi|188528689 syntaxin binding protein 2 isoform a [Homo sapiens] 75 1e-13
gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens] 74 5e-13
gi|4507297 syntaxin binding protein 1 isoform a [Homo sapiens] 64 4e-10
gi|73760415 syntaxin binding protein 1 isoform b [Homo sapiens] 64 4e-10
gi|118600975 syntaxin binding protein 3 [Homo sapiens] 62 2e-09
gi|18105056 vacuolar protein sorting 33A [Homo sapiens] 43 9e-04
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 36 0.084
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 36 0.084
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 36 0.084
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 36 0.084
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 33 0.54
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 33 0.54
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 33 0.71
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 33 0.71
gi|45387945 family with sequence similarity 62 (C2 domain contai... 32 1.2
gi|21914927 helicase, lymphoid-specific [Homo sapiens] 32 1.2
gi|54144631 phosphatase and actin regulator 1 [Homo sapiens] 32 1.6
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 32 1.6
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ... 32 1.6
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ... 32 1.6
gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1 ... 32 1.6
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ... 32 1.6
gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1 [... 32 1.6
gi|203096856 kinesin family member 7 [Homo sapiens] 32 2.1
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 31 2.7
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 31 2.7
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 31 2.7
>gi|33469978 vesicle transport-related protein isoform b [Homo
sapiens]
Length = 575
Score = 1141 bits (2951), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL 60
MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL
Sbjct: 1 MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL 60
Query: 61 EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME 120
EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME
Sbjct: 61 EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME 120
Query: 121 TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG 180
TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG
Sbjct: 121 TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG 180
Query: 181 AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA 240
AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA
Sbjct: 181 AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA 240
Query: 241 RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE 300
RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE
Sbjct: 241 RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE 300
Query: 301 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 360
DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK
Sbjct: 301 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 360
Query: 361 IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL 420
IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL
Sbjct: 361 IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL 420
Query: 421 NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV 480
NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV
Sbjct: 421 NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV 480
Query: 481 TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL 540
TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL
Sbjct: 481 TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL 540
Query: 541 VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 575
VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK
Sbjct: 541 VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 575
>gi|33469966 vesicle transport-related protein isoform a [Homo
sapiens]
Length = 642
Score = 1141 bits (2951), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL 60
MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL
Sbjct: 68 MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL 127
Query: 61 EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME 120
EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME
Sbjct: 128 EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME 187
Query: 121 TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG 180
TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG
Sbjct: 188 TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG 247
Query: 181 AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA 240
AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA
Sbjct: 248 AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA 307
Query: 241 RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE 300
RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE
Sbjct: 308 RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE 367
Query: 301 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 360
DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK
Sbjct: 368 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 427
Query: 361 IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL 420
IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL
Sbjct: 428 IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL 487
Query: 421 NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV 480
NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV
Sbjct: 488 NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV 547
Query: 481 TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL 540
TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL
Sbjct: 548 TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL 607
Query: 541 VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 575
VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK
Sbjct: 608 VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 642
>gi|18105063 vacuolar protein sorting 45A [Homo sapiens]
Length = 570
Score = 114 bits (284), Expect = 3e-25
Identities = 129/578 (22%), Positives = 243/578 (42%), Gaps = 101/578 (17%)
Query: 12 DRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDIANAALAAS 71
+R+ + + A+ F+ PT+EN+D + Q+LR Y Y++ F + IS+S ++ +A A
Sbjct: 59 NREIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVISKSDVKSLAEA----D 114
Query: 72 AVTQVAKVFDQYLNFITLEDDMFVL----CNQNKELVSYRAINRPDITDTEMETVMDTIV 127
VA+V + Y ++I + +F L C Q + + +
Sbjct: 115 EQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQ---------------LSRTT 159
Query: 128 DSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQ 187
L ++L P+IR + A K+L E ++ + F F+
Sbjct: 160 QGLTALLLSLKKCPMIRYQLSSEAA-------KRLAECVKQVITKEYE-------LFEFR 205
Query: 188 R----PLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPK 243
R PLL+++DR D TPL + WTYQA+VH++L + NR++L G+
Sbjct: 206 RTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLS 265
Query: 244 RKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQE-DEVKRLKSIMGLEGEDE 302
+N D+F+ + F E+ +++ +E ++ ++ E ++L+SI
Sbjct: 266 AEN---------DEFYANNMYLNFAEIGSNIKNLMEDFQKKKPKEQQKLESI-------- 308
Query: 303 GAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIM 362
A + + V + P+ + + H V + + R L E E+++
Sbjct: 309 ----------ADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELA 358
Query: 363 SKTTLDKSLLDI---ISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCN 419
+ +L +I + +P T D RL ++Y + ++ S + L L + G +
Sbjct: 359 CQNDHSSALQNIKRLLQNPKV-TEFDAARLVMLYALHYERHSSNS-LPGLMMDLRNKGVS 416
Query: 420 LNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLS--RVMNTGSQFV--MEGVKNLVLKQ 475
+ + K+ SA YG + L S + QF+ ++GV+N+ +
Sbjct: 417 ----------EKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQH 466
Query: 476 QNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYI 535
Q + LD+L +K + + Y Y P LR Q+ IVFV+GG Y
Sbjct: 467 QPF-LHETLDHL--IKGRLKENLYPYLGPSTLRDRP----------QDIIVFVIGGATYE 513
Query: 536 EYQNLVDYIKGKQGKHILYGCSELFNATQFIKQLSQLG 573
E + + + G I+ G + + N F++++ G
Sbjct: 514 EALTVYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASG 551
>gi|188528689 syntaxin binding protein 2 isoform a [Homo sapiens]
Length = 593
Score = 75.5 bits (184), Expect = 1e-13
Identities = 121/603 (20%), Positives = 232/603 (38%), Gaps = 99/603 (16%)
Query: 2 GITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQ---LYESYYLNFISAISRS 58
GIT+ ++ R+PIP + A+Y + PTE+++ + +D + Y++ ++ F
Sbjct: 54 GITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIKDFQGTPTFTYKAAHIFFTDTCPEP 113
Query: 59 KLEDIANAALAASAVTQVAKVFDQ-YLNFITLEDDMFVLCNQNKELVSYRAINRPDITDT 117
++ + LA +V K + +L F+ E +F L + Y + T
Sbjct: 114 LFSELGRSRLA-----KVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAEERT-- 166
Query: 118 EMETVMDTIVDSLFCFFVTLGAVPIIRCSRG--TAAEMVAVKLDKKLRENLRDARNSLFT 175
++ + + TL P IR +G A++ L A+ + F
Sbjct: 167 ---RQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVL----------AKLNAFK 213
Query: 176 GDTLGAGQFSFQ-RPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVE 234
DT G+ + R L+++DR D +PL H T+QA+ +D+LD + E++G+
Sbjct: 214 ADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRY-ETTGLS 272
Query: 235 NSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSI 294
+ +K+ L D W + + +V++ V + L ++ E KRL +
Sbjct: 273 EA---------REKAVLLDEDDDLWVELRHMHIADVSKKVTELLRTF----CESKRLTTD 319
Query: 295 MGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVY 354
N L+ + +P+ ++ H ++A ++H K +
Sbjct: 320 KA--------------NIKDLSQILKKMPQYQKELNKYSTHLHLADDCMKHFKGSVEKLC 365
Query: 355 FEYEEKIMSKTTLDKSLLDIIS-----DPDAGTPE-DKMRLFLIYYISTQQAPSEADLEQ 408
++ M + + D + DA P DK+R+ L+Y + E
Sbjct: 366 SVEQDLAMGSDAEGEKIKDSMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEE----- 420
Query: 409 YKKALTDAGCNLNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGV 468
NL L +A + + G T T P G +G+ +E
Sbjct: 421 ----------NLAKLIQHANVQAHSSLIRNLEQLGGTVTNPGG-------SGTSSRLEPR 463
Query: 469 KNLVLKQQNLPVTRILDNLMEMKSNPETDDYRY---FDPKMLRGNDSSVP-------RNK 518
+ + Q T ++ ++ME D + DP + ++V +NK
Sbjct: 464 ERMEPTYQLSRWTPVIKDVMEDAVEDRLDRNLWPFVSDPAPTASSQAAVSARFGHWHKNK 523
Query: 519 NPFQ-----EAIVFVVGGGNYIEYQNLVDYIKGKQGK-HILYGCSELFNATQFIKQLSQL 572
+ IV+V+GG E + + + +GK +L G S + T+F+ L L
Sbjct: 524 AGIEARAGPRLIVYVMGGVAMSEMRAAYEVTRATEGKWEVLIGSSHILTPTRFLDDLKAL 583
Query: 573 GQK 575
+K
Sbjct: 584 DKK 586
>gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens]
Length = 590
Score = 73.6 bits (179), Expect = 5e-13
Identities = 121/600 (20%), Positives = 229/600 (38%), Gaps = 96/600 (16%)
Query: 2 GITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLE 61
GIT+ ++ R+PIP + A+Y + PTE+ + + Q Y++ ++ F
Sbjct: 54 GITIVEDINKRREPIPSLEAIYLLSPTEKALIKDFQGTPTFTYKAAHIFFTDTCPEPLFS 113
Query: 62 DIANAALAASAVTQVAKVFDQ-YLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME 120
++ + LA +V K + +L F+ E +F L + Y + T
Sbjct: 114 ELGRSRLA-----KVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAEERT----- 163
Query: 121 TVMDTIVDSLFCFFVTLGAVPIIRCSRG--TAAEMVAVKLDKKLRENLRDARNSLFTGDT 178
++ + + TL P IR +G A++ L A+ + F DT
Sbjct: 164 RQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVL----------AKLNAFKADT 213
Query: 179 LGAGQFSFQ-RPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSP 237
G+ + R L+++DR D +PL H T+QA+ +D+LD + E++G+ +
Sbjct: 214 PSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRY-ETTGLSEA- 271
Query: 238 AGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGL 297
+K+ L D W + + +V++ V + L ++ E KRL +
Sbjct: 272 --------REKAVLLDEDDDLWVELRHMHIADVSKKVTELLRTF----CESKRLTTDKA- 318
Query: 298 EGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEY 357
N L+ + +P+ ++ H ++A ++H K +
Sbjct: 319 -------------NIKDLSQILKKMPQYQKELNKYSTHLHLADDCMKHFKGSVEKLCSVE 365
Query: 358 EEKIMSKTTLDKSLLDIIS-----DPDAGTPE-DKMRLFLIYYISTQQAPSEADLEQYKK 411
++ M + + D + DA P DK+R+ L+Y + E
Sbjct: 366 QDLAMGSDAEGEKIKDSMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEE-------- 417
Query: 412 ALTDAGCNLNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNL 471
NL L +A + + G T T P G +G+ +E + +
Sbjct: 418 -------NLAKLIQHANVQAHSSLIRNLEQLGGTVTNPGG-------SGTSSRLEPRERM 463
Query: 472 VLKQQNLPVTRILDNLMEMKSNPETDDYRY---FDPKMLRGNDSSVP-------RNKNPF 521
Q T ++ ++ME D + DP + ++V +NK
Sbjct: 464 EPTYQLSRWTPVIKDVMEDAVEDRLDRNLWPFVSDPAPTASSQAAVSARFGHWHKNKAGI 523
Query: 522 Q-----EAIVFVVGGGNYIEYQNLVDYIKGKQGK-HILYGCSELFNATQFIKQLSQLGQK 575
+ IV+V+GG E + + + +GK +L G S + T+F+ L L +K
Sbjct: 524 EARAGPRLIVYVMGGVAMSEMRAAYEVTRATEGKWEVLIGSSHILTPTRFLDDLKALDKK 583
>gi|4507297 syntaxin binding protein 1 isoform a [Homo sapiens]
Length = 603
Score = 63.9 bits (154), Expect = 4e-10
Identities = 78/405 (19%), Positives = 171/405 (42%), Gaps = 60/405 (14%)
Query: 2 GITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLE 61
GIT+ ++ R+P+P + AVY + P+E+++ + D ++ Y + + S +
Sbjct: 54 GITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHV-FFTDSCPD 112
Query: 62 DIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMET 121
+ N + + A + + + + F+ E ++ L + + S+++ P +
Sbjct: 113 ALFNELVKSRAAKVIKTLTEINIAFLPYESQVYSLDSAD----SFQSFYSPHKAQMK-NP 167
Query: 122 VMDTIVDSLFCFFVTLGAVPIIRC-----SRGTAAEMVAVKLDKKLRENLRDARNSLFTG 176
+++ + + + TL P +R A+++ KLD ++
Sbjct: 168 ILERLAEQIATLCATLKEYPAVRYRGEYKDNALLAQLIQDKLDAYKADD----------- 216
Query: 177 DTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENS 236
T+G G + LL+L DR D ++P+ H T+QA+ +D+L N V E+SG+ +
Sbjct: 217 PTMGEGPDKARSQLLIL-DRGFDPSSPVLHELTFQAMSYDLLPIE-NDVYKYETSGIGEA 274
Query: 237 PAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMG 296
K L D W + EV++ V + L+ + + KR+ +
Sbjct: 275 ---------RVKEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS----KRMNT--- 318
Query: 297 LEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFE 356
G + + D L+ + +P+ ++ H ++A ++H + +D
Sbjct: 319 ------GEKTTMRD----LSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQG-TVDKLCR 367
Query: 357 YEEKIMSKTTLD--------KSLLDIISDPDAGTPEDKMRLFLIY 393
E+ + T + ++++ I+ D + T DK+R+ L+Y
Sbjct: 368 VEQDLAMGTDAEGEKIKDPMRAIVPILLDANVST-YDKIRIILLY 411
>gi|73760415 syntaxin binding protein 1 isoform b [Homo sapiens]
Length = 594
Score = 63.9 bits (154), Expect = 4e-10
Identities = 78/405 (19%), Positives = 171/405 (42%), Gaps = 60/405 (14%)
Query: 2 GITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLE 61
GIT+ ++ R+P+P + AVY + P+E+++ + D ++ Y + + S +
Sbjct: 54 GITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHV-FFTDSCPD 112
Query: 62 DIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMET 121
+ N + + A + + + + F+ E ++ L + + S+++ P +
Sbjct: 113 ALFNELVKSRAAKVIKTLTEINIAFLPYESQVYSLDSAD----SFQSFYSPHKAQMK-NP 167
Query: 122 VMDTIVDSLFCFFVTLGAVPIIRC-----SRGTAAEMVAVKLDKKLRENLRDARNSLFTG 176
+++ + + + TL P +R A+++ KLD ++
Sbjct: 168 ILERLAEQIATLCATLKEYPAVRYRGEYKDNALLAQLIQDKLDAYKADD----------- 216
Query: 177 DTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENS 236
T+G G + LL+L DR D ++P+ H T+QA+ +D+L N V E+SG+ +
Sbjct: 217 PTMGEGPDKARSQLLIL-DRGFDPSSPVLHELTFQAMSYDLLPIE-NDVYKYETSGIGEA 274
Query: 237 PAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMG 296
K L D W + EV++ V + L+ + + KR+ +
Sbjct: 275 ---------RVKEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS----KRMNT--- 318
Query: 297 LEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFE 356
G + + D L+ + +P+ ++ H ++A ++H + +D
Sbjct: 319 ------GEKTTMRD----LSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQG-TVDKLCR 367
Query: 357 YEEKIMSKTTLD--------KSLLDIISDPDAGTPEDKMRLFLIY 393
E+ + T + ++++ I+ D + T DK+R+ L+Y
Sbjct: 368 VEQDLAMGTDAEGEKIKDPMRAIVPILLDANVST-YDKIRIILLY 411
>gi|118600975 syntaxin binding protein 3 [Homo sapiens]
Length = 592
Score = 61.6 bits (148), Expect = 2e-09
Identities = 82/396 (20%), Positives = 156/396 (39%), Gaps = 68/396 (17%)
Query: 2 GITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQ---LYESYYLNFISAISRS 58
GIT+ ++ +R+P+ + A+YF+ PT +++D D ++ Y++ Y+ F +
Sbjct: 58 GITVVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDN 117
Query: 59 KLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTE 118
I AS + + + ++FI E ++ L + Y PD + +
Sbjct: 118 LFNKI-----KASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCY----SPDPGNAK 168
Query: 119 -METVMDTIVDSLFCFFVTLGAVPIIRCSRGTA--AEMVAVKLDKKLRENLRDARNSLFT 175
+ +M+T+ D + TL P +R A +A ++KKL + + SL
Sbjct: 169 GKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIK 228
Query: 176 GDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVEN 235
G T L+++DR D + + H T+QA+ +D+L +EN
Sbjct: 229 GKT---------HSQLLIIDRGFDPVSTVLHELTFQAMAYDLLP-------------IEN 266
Query: 236 SPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIM 295
+ K K++ L D W + + V E + K +K I
Sbjct: 267 DTYKYKTDGKEKEAI-LEEEDDLWVRIRHRHIAVVLEEIP-------------KLMKEIS 312
Query: 296 GLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYF 355
+ EG S+ + LT + +P ++ +H N+A + F
Sbjct: 313 STKKATEGKTSL-----SALTQLMKKMPHFRKQITKQVVHLNLAEDCMNK---------F 358
Query: 356 EYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFL 391
+ + + KT D L + +D + +D MR+ L
Sbjct: 359 KLNIEKLCKTEQD---LALGTDAEGQKVKDSMRVLL 391
>gi|18105056 vacuolar protein sorting 33A [Homo sapiens]
Length = 596
Score = 42.7 bits (99), Expect = 9e-04
Identities = 49/233 (21%), Positives = 90/233 (38%), Gaps = 32/233 (13%)
Query: 138 GAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQRPLLVLVDRN 197
G +P I +G A VA + + RE ++NS+F F L+L+DRN
Sbjct: 187 GTIPQI-FGKGECARQVANMMIRMKRE-FTGSQNSIFP---------VFDN--LLLLDRN 233
Query: 198 IDLATPLHHTWTYQALVHDVLDFHLNRVNL-EESSGVENSPAGARPKRKNKKSYDLTPVD 256
+DL TPL TY+ L+ ++ + V L E + G + K L +
Sbjct: 234 VDLLTPLATQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAE 293
Query: 257 KFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAISMLSDNTAKLT 316
+ + + + F V + ++ + A +E K++ ++
Sbjct: 294 ELYAEIRDKNFNAVGSVLSKKAKIISAAFEERHNAKTV------------------GEIK 335
Query: 317 SAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDK 369
VS LP + + + HT++A + + + E++ MS DK
Sbjct: 336 QFVSQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDK 388
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 36.2 bits (82), Expect = 0.084
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 269 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 320
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 182 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 241
Query: 321 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 379
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 242 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 297
Query: 380 AGTPEDKM 387
A ++M
Sbjct: 298 AALGAEEM 305
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 36.2 bits (82), Expect = 0.084
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 269 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 320
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 296 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 355
Query: 321 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 379
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 356 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 411
Query: 380 AGTPEDKM 387
A ++M
Sbjct: 412 AALGAEEM 419
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 36.2 bits (82), Expect = 0.084
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 269 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 320
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 182 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 241
Query: 321 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 379
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 242 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 297
Query: 380 AGTPEDKM 387
A ++M
Sbjct: 298 AALGAEEM 305
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 36.2 bits (82), Expect = 0.084
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 269 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 320
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 316 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 375
Query: 321 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 379
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 376 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 431
Query: 380 AGTPEDKM 387
A ++M
Sbjct: 432 AALGAEEM 439
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 33.5 bits (75), Expect = 0.54
Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 31/197 (15%)
Query: 205 HHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVD-------- 256
+H + L ++ D + L+E + V + A N+ + +D
Sbjct: 274 NHGSKIEGLERELTDLNQEFETLQEKAQVNSRKAQTLNNNVNRATQSAKELDVKIKNVIR 333
Query: 257 --------KFWQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGE 300
+ WQK +A S++ L Y A+ +++ + K GL E
Sbjct: 334 NVHMLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQE 393
Query: 301 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 360
+E A+ + ++ S S + L L TN+A ++E K++K EYE+
Sbjct: 394 NERALGAIQRQVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKL 446
Query: 361 IMSKTTLDKSLLDIISD 377
S + L D + +
Sbjct: 447 AASLNEARQELSDKVRE 463
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 33.5 bits (75), Expect = 0.54
Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 31/197 (15%)
Query: 205 HHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVD-------- 256
+H + L ++ D + L+E + V + A N+ + +D
Sbjct: 1883 NHGSKIEGLERELTDLNQEFETLQEKAQVNSRKAQTLNNNVNRATQSAKELDVKIKNVIR 1942
Query: 257 --------KFWQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGE 300
+ WQK +A S++ L Y A+ +++ + K GL E
Sbjct: 1943 NVHMLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQE 2002
Query: 301 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 360
+E A+ + ++ S S + L L TN+A ++E K++K EYE+
Sbjct: 2003 NERALGAIQRQVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKL 2055
Query: 361 IMSKTTLDKSLLDIISD 377
S + L D + +
Sbjct: 2056 AASLNEARQELSDKVRE 2072
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 33.1 bits (74), Expect = 0.71
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 259 WQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGEDEGAISMLSD 310
WQK +A S++ L Y A+ +++ + K GL E+E A+ +
Sbjct: 2009 WQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQENERALGAIQR 2068
Query: 311 NTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKS 370
++ S S + L L TN+A ++E K++K EYE+ S +
Sbjct: 2069 QVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKLAASLNEARQE 2121
Query: 371 LLDIISD 377
L D + +
Sbjct: 2122 LSDKVRE 2128
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 33.1 bits (74), Expect = 0.71
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 259 WQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGEDEGAISMLSD 310
WQK +A S++ L Y A+ +++ + K GL E+E A+ +
Sbjct: 400 WQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQENERALGAIQR 459
Query: 311 NTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKS 370
++ S S + L L TN+A ++E K++K EYE+ S +
Sbjct: 460 QVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKLAASLNEARQE 512
Query: 371 LLDIISD 377
L D + +
Sbjct: 513 LSDKVRE 519
>gi|45387945 family with sequence similarity 62 (C2 domain
containing) member B [Homo sapiens]
Length = 893
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 326 LEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDPDAGTPED 385
+EK+RL+D L+ + KL + E+ + + + LDK L DI +D D
Sbjct: 451 VEKERLLD-----EWFTLDEVPKGKLHLRLEWLTLMPNASNLDKVLTDIKADKDQANDGL 505
Query: 386 KMRLFLIYYISTQQAPS 402
L ++Y S + PS
Sbjct: 506 SSALLILYLDSARNLPS 522
>gi|21914927 helicase, lymphoid-specific [Homo sapiens]
Length = 838
Score = 32.3 bits (72), Expect = 1.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Query: 210 YQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPE 269
Y A+V+ + N E +E SP G RPKR+ +KS + + +D F
Sbjct: 480 YTAIVNRTI---ANMFGSSEKETIELSPTG-RPKRRTRKSINYSKIDDF----------- 524
Query: 270 VAESVQQELESYRAQ-EDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLE 327
ELE +Q + EV R ++++ + E +++ N L + P L+E
Sbjct: 525 -----PNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIE 578
>gi|54144631 phosphatase and actin regulator 1 [Homo sapiens]
Length = 580
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 242 PKRKNKKSYDLTPVDK--FWQKHKGSPFPEVAESVQQELESYRAQEDEVKR--LKSIMGL 297
P R+ K +L + K W+K K F + ++++++ +++E+ +KR LK I
Sbjct: 106 PIRRRSKFANLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVLKEIYDK 165
Query: 298 EGE-----DEGAISMLSDNTAKLTSAVSSLPELLE 327
+GE +E ++ +N L+S+ SLP L E
Sbjct: 166 DGELSISNEEDSL----ENGQSLSSSQLSLPALSE 196
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 251 DLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGED-EGAISMLS 309
+L V W+K E+ E + +L+ + E+K+ + G E E+ I+ L
Sbjct: 1039 ELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAELKQKILLFGCEKEEMNKEITWLK 1098
Query: 310 DNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDK 369
+ K + ++ L E L++K H N +KA + + + + T L +
Sbjct: 1099 EEGVKQDTTLNELQEQLKQK---SAHVNSLAQDETKLKAHLEKLEVDLNKSLKENTFLQE 1155
Query: 370 SLLDI 374
L+++
Sbjct: 1156 QLVEL 1160
>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
[Homo sapiens]
Length = 818
Score = 32.0 bits (71), Expect = 1.6
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 228 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 287
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 183 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 242
Query: 288 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 335
E E G + + + A++ T LPE LE + R++ +
Sbjct: 243 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 295
Query: 336 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 372
V + I + V + +++ ++T+ + +L
Sbjct: 296 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 332
>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
[Homo sapiens]
Length = 837
Score = 32.0 bits (71), Expect = 1.6
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 228 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 287
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 202 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 261
Query: 288 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 335
E E G + + + A++ T LPE LE + R++ +
Sbjct: 262 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 314
Query: 336 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 372
V + I + V + +++ ++T+ + +L
Sbjct: 315 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 351
>gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 32.0 bits (71), Expect = 1.6
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 228 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 287
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 207 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 266
Query: 288 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 335
E E G + + + A++ T LPE LE + R++ +
Sbjct: 267 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 319
Query: 336 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 372
V + I + V + +++ ++T+ + +L
Sbjct: 320 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 356
>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
[Homo sapiens]
Length = 842
Score = 32.0 bits (71), Expect = 1.6
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 228 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 287
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 207 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 266
Query: 288 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 335
E E G + + + A++ T LPE LE + R++ +
Sbjct: 267 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 319
Query: 336 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 372
V + I + V + +++ ++T+ + +L
Sbjct: 320 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 356
>gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 32.0 bits (71), Expect = 1.6
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 228 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 287
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 207 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 266
Query: 288 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 335
E E G + + + A++ T LPE LE + R++ +
Sbjct: 267 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 319
Query: 336 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 372
V + I + V + +++ ++T+ + +L
Sbjct: 320 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 356
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 31.6 bits (70), Expect = 2.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 274 VQQELESYRAQEDEVKR-LKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKR 330
++QE E RA+ E +R L+ + G E +D G S L + ++ +A S + L EKK+
Sbjct: 748 LEQEAEQVRAELSEGQRQLRELEGKELQDAGERSRLQEFRRRVAAAQSQVQVLKEKKQ 805
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 31.2 bits (69), Expect = 2.7
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 269 EVAESVQQELESYRAQEDEVKRLKS-IMGLE---GEDEGAISMLSDNTAKLTSAVSSLPE 324
E+AE + L A +DE +RL++ I LE E++G + +SD K T L
Sbjct: 1712 ELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSN 1771
Query: 325 LLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSK 364
L +R A LE E E + SK
Sbjct: 1772 ELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSK 1811
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 31.2 bits (69), Expect = 2.7
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 269 EVAESVQQELESYRAQEDEVKRLKS-IMGLE---GEDEGAISMLSDNTAKLTSAVSSLPE 324
E+AE + L A +DE +RL++ I LE E++G + +SD K T L
Sbjct: 1719 ELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSN 1778
Query: 325 LLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSK 364
L +R A LE E E + SK
Sbjct: 1779 ELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSK 1818
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 31.2 bits (69), Expect = 2.7
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 269 EVAESVQQELESYRAQEDEVKRLKS-IMGLE---GEDEGAISMLSDNTAKLTSAVSSLPE 324
E+AE + L A +DE +RL++ I LE E++G + +SD K T L
Sbjct: 1719 ELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSN 1778
Query: 325 LLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSK 364
L +R A LE E E + SK
Sbjct: 1779 ELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSK 1818
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,500,088
Number of Sequences: 37866
Number of extensions: 897929
Number of successful extensions: 2620
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 2576
Number of HSP's gapped (non-prelim): 88
length of query: 575
length of database: 18,247,518
effective HSP length: 108
effective length of query: 467
effective length of database: 14,157,990
effective search space: 6611781330
effective search space used: 6611781330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.