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Search of human proteins with 33469966
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33469966 vesicle transport-related protein isoform a [Homo
sapiens]
(642 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33469966 vesicle transport-related protein isoform a [Homo sa... 1268 0.0
gi|33469978 vesicle transport-related protein isoform b [Homo sa... 1141 0.0
gi|18105063 vacuolar protein sorting 45A [Homo sapiens] 121 2e-27
gi|188528689 syntaxin binding protein 2 isoform a [Homo sapiens] 88 2e-17
gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens] 86 8e-17
gi|4507297 syntaxin binding protein 1 isoform a [Homo sapiens] 80 6e-15
gi|73760415 syntaxin binding protein 1 isoform b [Homo sapiens] 80 6e-15
gi|118600975 syntaxin binding protein 3 [Homo sapiens] 76 1e-13
gi|18105056 vacuolar protein sorting 33A [Homo sapiens] 44 6e-04
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 36 0.096
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 36 0.096
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 36 0.096
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 36 0.096
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 33 0.62
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 33 0.62
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 33 0.81
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 33 0.81
gi|45387945 family with sequence similarity 62 (C2 domain contai... 32 1.4
gi|21914927 helicase, lymphoid-specific [Homo sapiens] 32 1.4
gi|54144631 phosphatase and actin regulator 1 [Homo sapiens] 32 1.8
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 32 1.8
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ... 32 1.8
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ... 32 1.8
gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1 ... 32 1.8
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ... 32 1.8
gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1 [... 32 1.8
gi|203096856 kinesin family member 7 [Homo sapiens] 32 2.4
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 31 3.1
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 31 3.1
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 31 3.1
>gi|33469966 vesicle transport-related protein isoform a [Homo
sapiens]
Length = 642
Score = 1268 bits (3281), Expect = 0.0
Identities = 642/642 (100%), Positives = 642/642 (100%)
Query: 1 MAAAAAATAAAAASIRERQTVALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLL 60
MAAAAAATAAAAASIRERQTVALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLL
Sbjct: 1 MAAAAAATAAAAASIRERQTVALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLL 60
Query: 61 SVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFIS 120
SVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFIS
Sbjct: 61 SVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFIS 120
Query: 121 AISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPD 180
AISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPD
Sbjct: 121 AISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPD 180
Query: 181 ITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSL 240
ITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSL
Sbjct: 181 ITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSL 240
Query: 241 FTGDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGV 300
FTGDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGV
Sbjct: 241 FTGDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGV 300
Query: 301 ENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKS 360
ENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKS
Sbjct: 301 ENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKS 360
Query: 361 IMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDV 420
IMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDV
Sbjct: 361 IMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDV 420
Query: 421 YFEYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKAL 480
YFEYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKAL
Sbjct: 421 YFEYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKAL 480
Query: 481 TDAGCNLNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVL 540
TDAGCNLNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVL
Sbjct: 481 TDAGCNLNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVL 540
Query: 541 KQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGN 600
KQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGN
Sbjct: 541 KQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGN 600
Query: 601 YIEYQNLVDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 642
YIEYQNLVDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK
Sbjct: 601 YIEYQNLVDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 642
>gi|33469978 vesicle transport-related protein isoform b [Homo
sapiens]
Length = 575
Score = 1141 bits (2951), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 68 MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL 127
MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL
Sbjct: 1 MGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKL 60
Query: 128 EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME 187
EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME
Sbjct: 61 EDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEME 120
Query: 188 TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG 247
TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG
Sbjct: 121 TVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLG 180
Query: 248 AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA 307
AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA
Sbjct: 181 AGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGA 240
Query: 308 RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE 367
RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE
Sbjct: 241 RPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGE 300
Query: 368 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 427
DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK
Sbjct: 301 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 360
Query: 428 IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL 487
IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL
Sbjct: 361 IMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNL 420
Query: 488 NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV 547
NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV
Sbjct: 421 NPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPV 480
Query: 548 TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL 607
TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL
Sbjct: 481 TRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNL 540
Query: 608 VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 642
VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK
Sbjct: 541 VDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK 575
>gi|18105063 vacuolar protein sorting 45A [Homo sapiens]
Length = 570
Score = 121 bits (304), Expect = 2e-27
Identities = 139/617 (22%), Positives = 261/617 (42%), Gaps = 102/617 (16%)
Query: 41 PVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHS-DRDPIPDVPAVYFVMPTEENI 99
P KVL+ D+ I+S + + E+ + L + S +R+ + + A+ F+ PT+EN+
Sbjct: 20 PGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNREIMKHLKAICFLRPTKENV 79
Query: 100 DRMCQDLRNQLYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDD 159
D + Q+LR Y Y++ F + IS+S ++ +A A VA+V + Y ++I +
Sbjct: 80 DYIIQELRRPKYTIYFIYFSNVISKSDVKSLAEA----DEQEVVAEVQEFYGDYIAVNPH 135
Query: 160 MFVL----CNQNKELVSYRAINRPDITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRG 215
+F L C Q + + + L ++L P+IR
Sbjct: 136 LFSLNILGCCQGRNWDPAQ---------------LSRTTQGLTALLLSLKKCPMIRYQLS 180
Query: 216 TAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQR----PLLVLVDRNIDLATPL 271
+ A K+L E ++ + F F+R PLL+++DR D TPL
Sbjct: 181 SEAA-------KRLAECVKQVITKEYE-------LFEFRRTEVPPLLLILDRCDDAITPL 226
Query: 272 HHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKG 331
+ WTYQA+VH++L + NR++L G+ +N D+F+ +
Sbjct: 227 LNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAEN---------DEFYANNMY 277
Query: 332 SPFPEVAESVQQELESYRAQE-DEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLP 390
F E+ +++ +E ++ ++ E ++L+SI A + + V + P
Sbjct: 278 LNFAEIGSNIKNLMEDFQKKKPKEQQKLESI------------------ADMKAFVENYP 319
Query: 391 ELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDI---ISDPDA 447
+ + + H V + + R L E E+++ + +L +I + +P
Sbjct: 320 QFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQNDHSSALQNIKRLLQNPKV 379
Query: 448 GTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNLNPLQYIKQWKAFTKMASAPA 507
T D RL ++Y + ++ S + L L + G + + + K+ SA
Sbjct: 380 -TEFDAARLVMLYALHYERHSSNS-LPGLMMDLRNKGVS----------EKYRKLVSAVV 427
Query: 508 SYGSTTTKPMGLLS--RVMNTGSQFV--MEGVKNLVLKQQNLPVTRILDNLMEMKSNPET 563
YG + L S + QF+ ++GV+N+ + Q + LD+L +K +
Sbjct: 428 EYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPF-LHETLDHL--IKGRLKE 484
Query: 564 DDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDYIKGKQGKHILYGC 623
+ Y Y P LR Q+ IVFV+GG Y E + + + G I+ G
Sbjct: 485 NLYPYLGPSTLRDRP----------QDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGG 534
Query: 624 SELFNATQFIKQLSQLG 640
+ + N F++++ G
Sbjct: 535 TTVHNTKSFLEEVLASG 551
>gi|188528689 syntaxin binding protein 2 isoform a [Homo sapiens]
Length = 593
Score = 88.2 bits (217), Expect = 2e-17
Identities = 129/629 (20%), Positives = 244/629 (38%), Gaps = 99/629 (15%)
Query: 43 WKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRM 102
WKVLI D I+S + ++ GIT+ ++ R+PIP + A+Y + PTE+++ +
Sbjct: 28 WKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQAL 87
Query: 103 CQDLRNQ---LYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQ-YLNFITLED 158
+D + Y++ ++ F ++ + LA +V K + +L F+ E
Sbjct: 88 IKDFQGTPTFTYKAAHIFFTDTCPEPLFSELGRSRLA-----KVVKTLKEIHLAFLPYEA 142
Query: 159 DMFVLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRG--T 216
+F L + Y + T ++ + + TL P IR +G
Sbjct: 143 QVFSLDAPHSTYNLYCPFRAEERT-----RQLEVLAQQIATLCATLQEYPAIRYRKGPED 197
Query: 217 AAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQ-RPLLVLVDRNIDLATPLHHTW 275
A++ L A+ + F DT G+ + R L+++DR D +PL H
Sbjct: 198 TAQLAHAVL----------AKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHEL 247
Query: 276 TYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFP 335
T+QA+ +D+LD + E++G+ + +K+ L D W + +
Sbjct: 248 TFQAMAYDLLDIEQDTYRY-ETTGLSEA---------REKAVLLDEDDDLWVELRHMHIA 297
Query: 336 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEK 395
+V++ V + L ++ E KRL + N L+ + +P+ ++
Sbjct: 298 DVSKKVTELLRTF----CESKRLTTDKA--------------NIKDLSQILKKMPQYQKE 339
Query: 396 KRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIIS-----DPDAGTP 450
H ++A ++H K + ++ M + + D + DA P
Sbjct: 340 LNKYSTHLHLADDCMKHFKGSVEKLCSVEQDLAMGSDAEGEKIKDSMKLIVPVLLDAAVP 399
Query: 451 E-DKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNLNPLQYIKQWKAFTKMASAPASY 509
DK+R+ L+Y + E NL L +A + +
Sbjct: 400 AYDKIRVLLLYILLRNGVSEE---------------NLAKLIQHANVQAHSSLIRNLEQL 444
Query: 510 GSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRY- 568
G T T P G +G+ +E + + Q T ++ ++ME D +
Sbjct: 445 GGTVTNPGG-------SGTSSRLEPRERMEPTYQLSRWTPVIKDVMEDAVEDRLDRNLWP 497
Query: 569 --FDPKMLRGNDSSVP-------RNKNPFQ-----EAIVFVVGGGNYIEYQNLVDYIKGK 614
DP + ++V +NK + IV+V+GG E + + +
Sbjct: 498 FVSDPAPTASSQAAVSARFGHWHKNKAGIEARAGPRLIVYVMGGVAMSEMRAAYEVTRAT 557
Query: 615 QGK-HILYGCSELFNATQFIKQLSQLGQK 642
+GK +L G S + T+F+ L L +K
Sbjct: 558 EGKWEVLIGSSHILTPTRFLDDLKALDKK 586
>gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens]
Length = 590
Score = 86.3 bits (212), Expect = 8e-17
Identities = 129/626 (20%), Positives = 241/626 (38%), Gaps = 96/626 (15%)
Query: 43 WKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRM 102
WKVLI D I+S + ++ GIT+ ++ R+PIP + A+Y + PTE+ + +
Sbjct: 28 WKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKALIKD 87
Query: 103 CQDLRNQLYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQ-YLNFITLEDDMF 161
Q Y++ ++ F ++ + LA +V K + +L F+ E +F
Sbjct: 88 FQGTPTFTYKAAHIFFTDTCPEPLFSELGRSRLA-----KVVKTLKEIHLAFLPYEAQVF 142
Query: 162 VLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRG--TAAE 219
L + Y + T ++ + + TL P IR +G A+
Sbjct: 143 SLDAPHSTYNLYCPFRAEERT-----RQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQ 197
Query: 220 MVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQ-RPLLVLVDRNIDLATPLHHTWTYQ 278
+ L A+ + F DT G+ + R L+++DR D +PL H T+Q
Sbjct: 198 LAHAVL----------AKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQ 247
Query: 279 ALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVA 338
A+ +D+LD + E++G+ + +K+ L D W + + +V+
Sbjct: 248 AMAYDLLDIEQDTYRY-ETTGLSEA---------REKAVLLDEDDDLWVELRHMHIADVS 297
Query: 339 ESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRL 398
+ V + L ++ E KRL + N L+ + +P+ ++
Sbjct: 298 KKVTELLRTF----CESKRLTTDKA--------------NIKDLSQILKKMPQYQKELNK 339
Query: 399 IDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIIS-----DPDAGTPE-D 452
H ++A ++H K + ++ M + + D + DA P D
Sbjct: 340 YSTHLHLADDCMKHFKGSVEKLCSVEQDLAMGSDAEGEKIKDSMKLIVPVLLDAAVPAYD 399
Query: 453 KMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNLNPLQYIKQWKAFTKMASAPASYGST 512
K+R+ L+Y + E NL L +A + + G T
Sbjct: 400 KIRVLLLYILLRNGVSEE---------------NLAKLIQHANVQAHSSLIRNLEQLGGT 444
Query: 513 TTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRY---F 569
T P G +G+ +E + + Q T ++ ++ME D +
Sbjct: 445 VTNPGG-------SGTSSRLEPRERMEPTYQLSRWTPVIKDVMEDAVEDRLDRNLWPFVS 497
Query: 570 DPKMLRGNDSSVP-------RNKNPFQ-----EAIVFVVGGGNYIEYQNLVDYIKGKQGK 617
DP + ++V +NK + IV+V+GG E + + + +GK
Sbjct: 498 DPAPTASSQAAVSARFGHWHKNKAGIEARAGPRLIVYVMGGVAMSEMRAAYEVTRATEGK 557
Query: 618 -HILYGCSELFNATQFIKQLSQLGQK 642
+L G S + T+F+ L L +K
Sbjct: 558 WEVLIGSSHILTPTRFLDDLKALDKK 583
>gi|4507297 syntaxin binding protein 1 isoform a [Homo sapiens]
Length = 603
Score = 80.1 bits (196), Expect = 6e-15
Identities = 89/455 (19%), Positives = 194/455 (42%), Gaps = 62/455 (13%)
Query: 21 VALKRMLNFNVPH--IKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHS 78
+ LK ++ + H IK + WKVL+ D+ ++S + ++ GIT+ ++
Sbjct: 4 IGLKAVVGEKIMHDVIKKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINK 63
Query: 79 DRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDIANAALAAS 138
R+P+P + AVY + P+E+++ + D ++ Y + + S + + N + +
Sbjct: 64 RREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHV-FFTDSCPDALFNELVKSR 122
Query: 139 AVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLF 198
A + + + + F+ E ++ L + + S+++ P + +++ + + +
Sbjct: 123 AAKVIKTLTEINIAFLPYESQVYSLDSAD----SFQSFYSPHKAQMK-NPILERLAEQIA 177
Query: 199 CFFVTLGAVPIIRC-----SRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSF 253
TL P +R A+++ KLD ++ T+G G
Sbjct: 178 TLCATLKEYPAVRYRGEYKDNALLAQLIQDKLDAYKADD-----------PTMGEGPDKA 226
Query: 254 QRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKN 313
+ LL+L DR D ++P+ H T+QA+ +D+L N V E+SG+ +
Sbjct: 227 RSQLLIL-DRGFDPSSPVLHELTFQAMSYDLLPIE-NDVYKYETSGIGEA---------R 275
Query: 314 KKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAIS 373
K L D W + EV++ V + L+ + + KR+ + G +
Sbjct: 276 VKEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS----KRMNT---------GEKT 322
Query: 374 MLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTT 433
+ D L+ + +P+ ++ H ++A ++H + +D E+ + T
Sbjct: 323 TMRD----LSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQG-TVDKLCRVEQDLAMGTD 377
Query: 434 LD--------KSLLDIISDPDAGTPEDKMRLFLIY 460
+ ++++ I+ D + T DK+R+ L+Y
Sbjct: 378 AEGEKIKDPMRAIVPILLDANVST-YDKIRIILLY 411
>gi|73760415 syntaxin binding protein 1 isoform b [Homo sapiens]
Length = 594
Score = 80.1 bits (196), Expect = 6e-15
Identities = 89/455 (19%), Positives = 194/455 (42%), Gaps = 62/455 (13%)
Query: 21 VALKRMLNFNVPH--IKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHS 78
+ LK ++ + H IK + WKVL+ D+ ++S + ++ GIT+ ++
Sbjct: 4 IGLKAVVGEKIMHDVIKKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINK 63
Query: 79 DRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDIANAALAAS 138
R+P+P + AVY + P+E+++ + D ++ Y + + S + + N + +
Sbjct: 64 RREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHV-FFTDSCPDALFNELVKSR 122
Query: 139 AVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLF 198
A + + + + F+ E ++ L + + S+++ P + +++ + + +
Sbjct: 123 AAKVIKTLTEINIAFLPYESQVYSLDSAD----SFQSFYSPHKAQMK-NPILERLAEQIA 177
Query: 199 CFFVTLGAVPIIRC-----SRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSF 253
TL P +R A+++ KLD ++ T+G G
Sbjct: 178 TLCATLKEYPAVRYRGEYKDNALLAQLIQDKLDAYKADD-----------PTMGEGPDKA 226
Query: 254 QRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKN 313
+ LL+L DR D ++P+ H T+QA+ +D+L N V E+SG+ +
Sbjct: 227 RSQLLIL-DRGFDPSSPVLHELTFQAMSYDLLPIE-NDVYKYETSGIGEA---------R 275
Query: 314 KKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAIS 373
K L D W + EV++ V + L+ + + KR+ + G +
Sbjct: 276 VKEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS----KRMNT---------GEKT 322
Query: 374 MLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTT 433
+ D L+ + +P+ ++ H ++A ++H + +D E+ + T
Sbjct: 323 TMRD----LSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQG-TVDKLCRVEQDLAMGTD 377
Query: 434 LD--------KSLLDIISDPDAGTPEDKMRLFLIY 460
+ ++++ I+ D + T DK+R+ L+Y
Sbjct: 378 AEGEKIKDPMRAIVPILLDANVST-YDKIRIILLY 411
>gi|118600975 syntaxin binding protein 3 [Homo sapiens]
Length = 592
Score = 75.9 bits (185), Expect = 1e-13
Identities = 88/425 (20%), Positives = 171/425 (40%), Gaps = 68/425 (16%)
Query: 40 EPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENI 99
E WK+++ D F +++ + +L + GIT+ ++ +R+P+ + A+YF+ PT +++
Sbjct: 29 EGEWKIMLLDEFTTKLLASCCKMTDLLEEGITVVENIYKNREPVRQMKALYFITPTSKSV 88
Query: 100 DRMCQDLRNQ---LYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQYLNFITL 156
D D ++ Y++ Y+ F + I AS + + + ++FI
Sbjct: 89 DCFLHDFASKSENKYKAAYIYFTDFCPDNLFNKI-----KASCSKSIRRCKEINISFIPH 143
Query: 157 EDDMFVLCNQNKELVSYRAINRPDITDTE-METVMDTIVDSLFCFFVTLGAVPIIRCSRG 215
E ++ L + Y PD + + + +M+T+ D + TL P +R
Sbjct: 144 ESQVYTLDVPDAFYYCY----SPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSK 199
Query: 216 TA--AEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQRPLLVLVDRNIDLATPLHH 273
A +A ++KKL + + SL G T L+++DR D + + H
Sbjct: 200 PLDNASKLAQLVEKKLEDYYKIDEKSLIKGKT---------HSQLLIIDRGFDPVSTVLH 250
Query: 274 TWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSP 333
T+QA+ +D+L +EN + K K++ L D W + +
Sbjct: 251 ELTFQAMAYDLLP-------------IENDTYKYKTDGKEKEAI-LEEEDDLWVRIRHRH 296
Query: 334 FPEVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELL 393
V E + K +K I + EG S+ + LT + +P
Sbjct: 297 IAVVLEEIP-------------KLMKEISSTKKATEGKTSL-----SALTQLMKKMPHFR 338
Query: 394 EKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDPDAGTPEDK 453
++ +H N+A + F+ + + KT D L + +D + +D
Sbjct: 339 KQITKQVVHLNLAEDCMNK---------FKLNIEKLCKTEQD---LALGTDAEGQKVKDS 386
Query: 454 MRLFL 458
MR+ L
Sbjct: 387 MRVLL 391
>gi|18105056 vacuolar protein sorting 33A [Homo sapiens]
Length = 596
Score = 43.5 bits (101), Expect = 6e-04
Identities = 75/403 (18%), Positives = 154/403 (38%), Gaps = 58/403 (14%)
Query: 44 KVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVP-AVYFVMPTEENIDRM 102
K +++D + + L++ + L +R P DV ++FV P E +D +
Sbjct: 34 KAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGNRLPAADVKNIIFFVRPRLELMDII 93
Query: 103 CQDL----RNQLYESYYLNFI---SAISRSKLEDIANAALAASAVTQVAKVFDQY-LNFI 154
+++ R +++ F+ S + +L+D+ + S + + ++Y L+ I
Sbjct: 94 AENVLSEDRRGPTRDFHILFVPRRSLLCEQRLKDLG---VLGSFIHR-----EEYSLDLI 145
Query: 155 TLEDDMFVLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSR 214
+ D+ + ++ Y + +T + L G +P I +
Sbjct: 146 PFDGDLLSMESEGAFKECYLEGD---------QTSLYHAAKGLMTLQALYGTIPQI-FGK 195
Query: 215 GTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQRPLLVLVDRNIDLATPLHHT 274
G A VA + + RE ++NS+F F L+L+DRN+DL TPL
Sbjct: 196 GECARQVANMMIRMKRE-FTGSQNSIFP---------VFDN--LLLLDRNVDLLTPLATQ 243
Query: 275 WTYQALVHDVLDFHLNRVNL-EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSP 333
TY+ L+ ++ + V L E + G + K L ++ + + +
Sbjct: 244 LTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAEELYAEIRDKN 303
Query: 334 FPEVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELL 393
F V + ++ + A +E K++ ++ VS LP +
Sbjct: 304 FNAVGSVLSKKAKIISAAFEERHNAKTV------------------GEIKQFVSQLPHMQ 345
Query: 394 EKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDK 436
+ + HT++A + + + E++ MS DK
Sbjct: 346 AARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDK 388
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 36.2 bits (82), Expect = 0.096
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 336 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 387
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 182 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 241
Query: 388 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 446
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 242 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 297
Query: 447 AGTPEDKM 454
A ++M
Sbjct: 298 AALGAEEM 305
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 36.2 bits (82), Expect = 0.096
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 336 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 387
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 296 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 355
Query: 388 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 446
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 356 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 411
Query: 447 AGTPEDKM 454
A ++M
Sbjct: 412 AALGAEEM 419
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 36.2 bits (82), Expect = 0.096
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 336 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 387
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 182 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 241
Query: 388 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 446
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 242 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 297
Query: 447 AGTPEDKM 454
A ++M
Sbjct: 298 AALGAEEM 305
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 36.2 bits (82), Expect = 0.096
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 336 EVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGA--------ISMLSDNTAKLTSAVS 387
E AES+QQE+E+ + + DE+ I+ E E++G+ + L + A+L A+
Sbjct: 316 ERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALV 375
Query: 388 SLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDP-D 446
+ +L ++ +V L K ++L+V + E++ + + +S +D + + D
Sbjct: 376 RMRDLSSSEK----QEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVD 431
Query: 447 AGTPEDKM 454
A ++M
Sbjct: 432 AALGAEEM 439
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 33.5 bits (75), Expect = 0.62
Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 31/197 (15%)
Query: 272 HHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVD-------- 323
+H + L ++ D + L+E + V + A N+ + +D
Sbjct: 274 NHGSKIEGLERELTDLNQEFETLQEKAQVNSRKAQTLNNNVNRATQSAKELDVKIKNVIR 333
Query: 324 --------KFWQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGE 367
+ WQK +A S++ L Y A+ +++ + K GL E
Sbjct: 334 NVHMLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQE 393
Query: 368 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 427
+E A+ + ++ S S + L L TN+A ++E K++K EYE+
Sbjct: 394 NERALGAIQRQVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKL 446
Query: 428 IMSKTTLDKSLLDIISD 444
S + L D + +
Sbjct: 447 AASLNEARQELSDKVRE 463
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 33.5 bits (75), Expect = 0.62
Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 31/197 (15%)
Query: 272 HHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVD-------- 323
+H + L ++ D + L+E + V + A N+ + +D
Sbjct: 1883 NHGSKIEGLERELTDLNQEFETLQEKAQVNSRKAQTLNNNVNRATQSAKELDVKIKNVIR 1942
Query: 324 --------KFWQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGE 367
+ WQK +A S++ L Y A+ +++ + K GL E
Sbjct: 1943 NVHMLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQE 2002
Query: 368 DEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEK 427
+E A+ + ++ S S + L L TN+A ++E K++K EYE+
Sbjct: 2003 NERALGAIQRQVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKL 2055
Query: 428 IMSKTTLDKSLLDIISD 444
S + L D + +
Sbjct: 2056 AASLNEARQELSDKVRE 2072
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 33.1 bits (74), Expect = 0.81
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 326 WQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGEDEGAISMLSD 377
WQK +A S++ L Y A+ +++ + K GL E+E A+ +
Sbjct: 2009 WQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQENERALGAIQR 2068
Query: 378 NTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKS 437
++ S S + L L TN+A ++E K++K EYE+ S +
Sbjct: 2069 QVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKLAASLNEARQE 2121
Query: 438 LLDIISD 444
L D + +
Sbjct: 2122 LSDKVRE 2128
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 33.1 bits (74), Expect = 0.81
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 326 WQKHKGSPFPEVAESVQQELESYRAQEDEVK--------RLKSIMGLEGEDEGAISMLSD 377
WQK +A S++ L Y A+ +++ + K GL E+E A+ +
Sbjct: 400 WQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQENERALGAIQR 459
Query: 378 NTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKS 437
++ S S + L L TN+A ++E K++K EYE+ S +
Sbjct: 460 QVKEINSLQSDFTKYLTTADSSLLQTNIALQLME--KSQK-----EYEKLAASLNEARQE 512
Query: 438 LLDIISD 444
L D + +
Sbjct: 513 LSDKVRE 519
>gi|45387945 family with sequence similarity 62 (C2 domain
containing) member B [Homo sapiens]
Length = 893
Score = 32.3 bits (72), Expect = 1.4
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 393 LEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDPDAGTPED 452
+EK+RL+D L+ + KL + E+ + + + LDK L DI +D D
Sbjct: 451 VEKERLLD-----EWFTLDEVPKGKLHLRLEWLTLMPNASNLDKVLTDIKADKDQANDGL 505
Query: 453 KMRLFLIYYISTQQAPS 469
L ++Y S + PS
Sbjct: 506 SSALLILYLDSARNLPS 522
>gi|21914927 helicase, lymphoid-specific [Homo sapiens]
Length = 838
Score = 32.3 bits (72), Expect = 1.4
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Query: 277 YQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPE 336
Y A+V+ + N E +E SP G RPKR+ +KS + + +D F
Sbjct: 480 YTAIVNRTI---ANMFGSSEKETIELSPTG-RPKRRTRKSINYSKIDDF----------- 524
Query: 337 VAESVQQELESYRAQ-EDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLE 394
ELE +Q + EV R ++++ + E +++ N L + P L+E
Sbjct: 525 -----PNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIE 578
>gi|54144631 phosphatase and actin regulator 1 [Homo sapiens]
Length = 580
Score = 32.0 bits (71), Expect = 1.8
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 309 PKRKNKKSYDLTPVDK--FWQKHKGSPFPEVAESVQQELESYRAQEDEVKR--LKSIMGL 364
P R+ K +L + K W+K K F + ++++++ +++E+ +KR LK I
Sbjct: 106 PIRRRSKFANLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVLKEIYDK 165
Query: 365 EGE-----DEGAISMLSDNTAKLTSAVSSLPELLE 394
+GE +E ++ +N L+S+ SLP L E
Sbjct: 166 DGELSISNEEDSL----ENGQSLSSSQLSLPALSE 196
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.0 bits (71), Expect = 1.8
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 318 DLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGED-EGAISMLS 376
+L V W+K E+ E + +L+ + E+K+ + G E E+ I+ L
Sbjct: 1039 ELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAELKQKILLFGCEKEEMNKEITWLK 1098
Query: 377 DNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDK 436
+ K + ++ L E L++K H N +KA + + + + T L +
Sbjct: 1099 EEGVKQDTTLNELQEQLKQK---SAHVNSLAQDETKLKAHLEKLEVDLNKSLKENTFLQE 1155
Query: 437 SLLDI 441
L+++
Sbjct: 1156 QLVEL 1160
>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
[Homo sapiens]
Length = 818
Score = 32.0 bits (71), Expect = 1.8
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 295 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 354
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 183 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 242
Query: 355 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 402
E E G + + + A++ T LPE LE + R++ +
Sbjct: 243 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 295
Query: 403 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 439
V + I + V + +++ ++T+ + +L
Sbjct: 296 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 332
>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
[Homo sapiens]
Length = 837
Score = 32.0 bits (71), Expect = 1.8
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 295 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 354
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 202 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 261
Query: 355 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 402
E E G + + + A++ T LPE LE + R++ +
Sbjct: 262 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 314
Query: 403 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 439
V + I + V + +++ ++T+ + +L
Sbjct: 315 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 351
>gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 32.0 bits (71), Expect = 1.8
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 295 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 354
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 207 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 266
Query: 355 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 402
E E G + + + A++ T LPE LE + R++ +
Sbjct: 267 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 319
Query: 403 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 439
V + I + V + +++ ++T+ + +L
Sbjct: 320 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 356
>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
[Homo sapiens]
Length = 842
Score = 32.0 bits (71), Expect = 1.8
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 295 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 354
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 207 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 266
Query: 355 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 402
E E G + + + A++ T LPE LE + R++ +
Sbjct: 267 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 319
Query: 403 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 439
V + I + V + +++ ++T+ + +L
Sbjct: 320 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 356
>gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 32.0 bits (71), Expect = 1.8
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 295 EESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDE 354
++S E S A P+ + DL P + K K +P PE EL + R + E
Sbjct: 207 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 266
Query: 355 VKRLKSIMGLEGEDEGAISMLSDNTAKL-----TSAVSSLPELLE-------KKRLIDLH 402
E E G + + + A++ T LPE LE + R++ +
Sbjct: 267 EP-------TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 319
Query: 403 TNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLL 439
V + I + V + +++ ++T+ + +L
Sbjct: 320 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL 356
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 31.6 bits (70), Expect = 2.4
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 341 VQQELESYRAQEDEVKR-LKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKR 397
++QE E RA+ E +R L+ + G E +D G S L + ++ +A S + L EKK+
Sbjct: 748 LEQEAEQVRAELSEGQRQLRELEGKELQDAGERSRLQEFRRRVAAAQSQVQVLKEKKQ 805
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 31.2 bits (69), Expect = 3.1
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 336 EVAESVQQELESYRAQEDEVKRLKS-IMGLE---GEDEGAISMLSDNTAKLTSAVSSLPE 391
E+AE + L A +DE +RL++ I LE E++G + +SD K T L
Sbjct: 1712 ELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSN 1771
Query: 392 LLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSK 431
L +R A LE E E + SK
Sbjct: 1772 ELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSK 1811
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 31.2 bits (69), Expect = 3.1
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 336 EVAESVQQELESYRAQEDEVKRLKS-IMGLE---GEDEGAISMLSDNTAKLTSAVSSLPE 391
E+AE + L A +DE +RL++ I LE E++G + +SD K T L
Sbjct: 1719 ELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSN 1778
Query: 392 LLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSK 431
L +R A LE E E + SK
Sbjct: 1779 ELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSK 1818
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 31.2 bits (69), Expect = 3.1
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 336 EVAESVQQELESYRAQEDEVKRLKS-IMGLE---GEDEGAISMLSDNTAKLTSAVSSLPE 391
E+AE + L A +DE +RL++ I LE E++G + +SD K T L
Sbjct: 1719 ELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSN 1778
Query: 392 LLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSK 431
L +R A LE E E + SK
Sbjct: 1779 ELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSK 1818
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,549,105
Number of Sequences: 37866
Number of extensions: 1004529
Number of successful extensions: 3492
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 3448
Number of HSP's gapped (non-prelim): 88
length of query: 642
length of database: 18,247,518
effective HSP length: 109
effective length of query: 533
effective length of database: 14,120,124
effective search space: 7526026092
effective search space used: 7526026092
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.