Guide to the Human Genome
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Name: FLCN Sequence: fasta or formatted (579aa) NCBI GI: 22907034
Description:

folliculin isoform 1

Referenced in:

Kidney

Other entries for this name:
alt prot [342aa] folliculin isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         39           3
 C cysteine            2.9         17           1
 D aspartate           4.0         23           2
 E glutamate           8.5         49           4
 F phenylalanine       4.3         25           2
 G glycine             6.4         37           2
 H histidine           3.5         20           1
 I isoleucine          3.8         22           2
 K lysine              4.8         28           2
 L leucine             9.7         56           2
 M methionine          2.6         15           2
 N asparagine          2.9         17           1
 P proline             5.5         32           2
 Q glutamine           4.5         26           1
 R arginine            5.2         30           1
 S serine             10.0         58           3
 T threonine           4.5         26           1
 V valine              6.9         40           2
 W tryptophan          1.7         10           1
 Y tyrosine            1.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   folliculin isoform 1 
FLCN                  0.501   folliculin isoform 2 
LRRTM4                0.010   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM4                0.010   leucine rich repeat transmembrane neuronal 4 isofor...
CLGN                  0.009   calmegin 
CLGN                  0.009   calmegin 
ZNF446                0.008   zinc finger protein 446 
TRIM44                0.007   DIPB protein 
C15orf52              0.007   hypothetical protein LOC388115 
LOC100288142          0.007   PREDICTED: hypothetical protein XP_002344485 
FSCB                  0.006   fibrous sheath CABYR binding protein 
LRRC68                0.006   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.006   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.006   PREDICTED: leucine rich repeat containing 68 
GJD4                  0.006   connexin40.1 
ZBTB41                0.006   zinc finger and BTB domain containing 41 
APBB1                 0.005   amyloid beta A4 precursor protein-binding, family B, ...
APBB1                 0.005   amyloid beta A4 precursor protein-binding, family B,...
KCTD1                 0.005   potassium channel tetramerisation domain containing...
NBPF20                0.005   hypothetical protein LOC400818 
NBPF10                0.005   hypothetical protein LOC100132406 
LOC100292232          0.005   PREDICTED: hypothetical protein 
LOC100291519          0.005   PREDICTED: hypothetical protein XP_002346602 
LOC100287133          0.005   PREDICTED: hypothetical protein XP_002342444 
PPARGC1B              0.005   peroxisome proliferator-activated receptor gamma, co...
NEFL                  0.005   neurofilament, light polypeptide 68kDa 
MAGEE1                0.005   melanoma antigen family E, 1 
FAM170A               0.005   family with sequence similarity 170, member A [Homo...
GORASP1               0.005   Golgi reassembly stacking protein 1 
NBPF1                 0.005   hypothetical protein LOC55672 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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