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Search of human proteins with 33356142
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33356142 hypothetical protein LOC203197 [Homo sapiens]
(342 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33356142 hypothetical protein LOC203197 [Homo sapiens] 696 0.0
gi|60498992 forkhead box P4 isoform 3 [Homo sapiens] 32 0.82
gi|29789367 forkhead box P4 isoform 2 [Homo sapiens] 32 0.82
gi|60498989 forkhead box P4 isoform 1 [Homo sapiens] 32 0.82
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 32 1.1
gi|169171308 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|89025853 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|42657886 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|42658266 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 31 1.8
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 31 1.8
gi|150378549 tangerin [Homo sapiens] 30 3.1
gi|33356148 formin-like 1 [Homo sapiens] 30 3.1
gi|239582741 FERM and PDZ domain containing 1 [Homo sapiens] 30 4.1
gi|56549117 dynamin 1 isoform 2 [Homo sapiens] 29 5.3
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 29 5.3
gi|41281612 zinc finger protein 828 [Homo sapiens] 29 7.0
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 29 7.0
gi|208431817 protein kinase-like protein SgK493 [Homo sapiens] 29 7.0
gi|170932483 N-acyl phosphatidylethanolamine phospholipase D [Ho... 29 7.0
gi|170932481 N-acyl phosphatidylethanolamine phospholipase D [Ho... 29 7.0
gi|239582765 ral guanine nucleotide dissociation stimulator-like... 28 9.1
gi|7662647 phosphatidylserine synthase 1 [Homo sapiens] 28 9.1
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 28 9.1
gi|33300663 polycomb group ring finger 5 [Homo sapiens] 28 9.1
gi|120587019 zinc finger protein 318 [Homo sapiens] 28 9.1
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 28 9.1
gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens] 28 9.1
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa... 28 9.1
>gi|33356142 hypothetical protein LOC203197 [Homo sapiens]
Length = 342
Score = 696 bits (1797), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MACEPQVDPGATGPLPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLG 60
MACEPQVDPGATGPLPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLG
Sbjct: 1 MACEPQVDPGATGPLPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLG 60
Query: 61 AAEEQLQTWGIQVPADQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWANIYS 120
AAEEQLQTWGIQVPADQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWANIYS
Sbjct: 61 AAEEQLQTWGIQVPADQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWANIYS 120
Query: 121 TSQMFALGNHWAGMLLVTLAAVSLTLTLVLVFERHQKKANTNTDLRLAAANGALLRHRVL 180
TSQMFALGNHWAGMLLVTLAAVSLTLTLVLVFERHQKKANTNTDLRLAAANGALLRHRVL
Sbjct: 121 TSQMFALGNHWAGMLLVTLAAVSLTLTLVLVFERHQKKANTNTDLRLAAANGALLRHRVL 180
Query: 181 LGVTDTVEGCQSVIQLWFVYFDLENCVQFLSDHVQEMKTSQESLLRSRLSQLCVVMETGV 240
LGVTDTVEGCQSVIQLWFVYFDLENCVQFLSDHVQEMKTSQESLLRSRLSQLCVVMETGV
Sbjct: 181 LGVTDTVEGCQSVIQLWFVYFDLENCVQFLSDHVQEMKTSQESLLRSRLSQLCVVMETGV 240
Query: 241 SPATAEGPENLEDAPLLPGNSCPNERPLMQTELHQLVPEAEPEEMARQLLAVFGGYYIRL 300
SPATAEGPENLEDAPLLPGNSCPNERPLMQTELHQLVPEAEPEEMARQLLAVFGGYYIRL
Sbjct: 241 SPATAEGPENLEDAPLLPGNSCPNERPLMQTELHQLVPEAEPEEMARQLLAVFGGYYIRL 300
Query: 301 LVTSQLPQAMGTRHTNSPRIPCPCQLIEAYILGTGCCPFLAR 342
LVTSQLPQAMGTRHTNSPRIPCPCQLIEAYILGTGCCPFLAR
Sbjct: 301 LVTSQLPQAMGTRHTNSPRIPCPCQLIEAYILGTGCCPFLAR 342
>gi|60498992 forkhead box P4 isoform 3 [Homo sapiens]
Length = 678
Score = 32.0 bits (71), Expect = 0.82
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 16 PPSSPGWSALPGGSPPGWGQ-ELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWGIQVP 74
PP+S P PPG G LH G D C+PIS +L E + ++ P
Sbjct: 409 PPTSAAAPVTPL-RPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVR-P 466
Query: 75 ADQYRSLAESALLEPQVRRYI---IYN 98
Y SL A+LE R+ IYN
Sbjct: 467 PFTYASLIRQAILETPDRQLTLNEIYN 493
>gi|29789367 forkhead box P4 isoform 2 [Homo sapiens]
Length = 667
Score = 32.0 bits (71), Expect = 0.82
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 16 PPSSPGWSALPGGSPPGWGQ-ELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWGIQVP 74
PP+S P PPG G LH G D C+PIS +L E + ++ P
Sbjct: 398 PPTSAAAPVTPL-RPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVR-P 455
Query: 75 ADQYRSLAESALLEPQVRRYI---IYN 98
Y SL A+LE R+ IYN
Sbjct: 456 PFTYASLIRQAILETPDRQLTLNEIYN 482
>gi|60498989 forkhead box P4 isoform 1 [Homo sapiens]
Length = 680
Score = 32.0 bits (71), Expect = 0.82
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 16 PPSSPGWSALPGGSPPGWGQ-ELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWGIQVP 74
PP+S P PPG G LH G D C+PIS +L E + ++ P
Sbjct: 411 PPTSAAAPVTPL-RPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVR-P 468
Query: 75 ADQYRSLAESALLEPQVRRYI---IYN 98
Y SL A+LE R+ IYN
Sbjct: 469 PFTYASLIRQAILETPDRQLTLNEIYN 495
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 31.6 bits (70), Expect = 1.1
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 14/79 (17%)
Query: 5 PQVDPGATGPLPPSSPGWSALPGGSPPGW--------------GQELHNGQVLTVLRIDN 50
PQ PG GP+ P G+ +PGG+ P G+ G+ +V +D
Sbjct: 1885 PQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDR 1944
Query: 51 TCAPISFDLGAAEEQLQTW 69
A E ++TW
Sbjct: 1945 LLETAGIKASALREIVETW 1963
>gi|169171308 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 2 ACEPQVDPGATGPLPPSSPGWSALPGGSP 30
AC P P GP PPS P +A GSP
Sbjct: 22 ACPPTCSPALAGPPPPSFPERAASSEGSP 50
>gi|89025853 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 2 ACEPQVDPGATGPLPPSSPGWSALPGGSP 30
AC P P GP PPS P +A GSP
Sbjct: 22 ACPPTCSPALAGPPPPSFPERAASSEGSP 50
>gi|42657886 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 2 ACEPQVDPGATGPLPPSSPGWSALPGGSP 30
AC P P GP PPS P +A GSP
Sbjct: 22 ACPPTCSPALAGPPPPSFPERAASSEGSP 50
>gi|42658266 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 2 ACEPQVDPGATGPLPPSSPGWSALPGGSP 30
AC P P GP PPS P +A GSP
Sbjct: 22 ACPPTCSPALAGPPPPSFPERAASSEGSP 50
>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform b [Homo sapiens]
Length = 2347
Score = 30.8 bits (68), Expect = 1.8
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 14 PLPPSSPGWSALPGGSP--PGW-GQELHNGQVLTVLRIDNTCAPISFDLGAAEEQ 65
PL PG +AL G SP PG G+E G L V ++ A +LGA EEQ
Sbjct: 14 PLGAPPPGPAALVGASPESPGAPGREAERGSELGVSPSESPAAERGAELGADEEQ 68
>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform a [Homo sapiens]
Length = 2353
Score = 30.8 bits (68), Expect = 1.8
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 14 PLPPSSPGWSALPGGSP--PGW-GQELHNGQVLTVLRIDNTCAPISFDLGAAEEQ 65
PL PG +AL G SP PG G+E G L V ++ A +LGA EEQ
Sbjct: 14 PLGAPPPGPAALVGASPESPGAPGREAERGSELGVSPSESPAAERGAELGADEEQ 68
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 30.0 bits (66), Expect = 3.1
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 2 ACEPQVDPGATGPLPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLGA 61
A E Q + P PP++ PGGS P G+ + R +T + +L A
Sbjct: 1310 AAEGQAPDPSPAPGPPTAADSQQPPGGSSPSEEPPPSPGEEAGLQRFQDTSQYVCAELQA 1369
Query: 62 AE-EQLQTWGIQVPAD-QYRSLAES 84
E EQ Q G + Q RSL ES
Sbjct: 1370 LEQEQRQIDGRAAEVEMQLRSLMES 1394
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 30.0 bits (66), Expect = 3.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 5 PQVDPGATGPLPPSSPGWSALPGGSPPGWGQ 35
P PG GP+PP P PGG P G+
Sbjct: 591 PPPPPGTDGPVPPPPPPPPPPPGGPPDALGR 621
>gi|239582741 FERM and PDZ domain containing 1 [Homo sapiens]
Length = 1578
Score = 29.6 bits (65), Expect = 4.1
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 15 LPPSSPGWSALPGGSPPGWGQE-LHNGQVLTVLRIDNTCAPISFDLGAAEEQ 65
L SS ++ GG+PP WGQ+ Q ++L P++F+ G+++E+
Sbjct: 719 LSDSSESTASRQGGAPPAWGQQGWTEAQPSSMLEPLALHPPLAFEDGSSDEE 770
>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
Length = 851
Score = 29.3 bits (64), Expect = 5.3
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 5 PQVDPGATGPLPPSSPGWSALPGGSPP 31
P PG+ GP P P SAL GG+PP
Sbjct: 789 PPARPGSRGPAPGPPPAGSAL-GGAPP 814
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 29.3 bits (64), Expect = 5.3
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 5 PQVDPGATGPLPPSSPGWSALPGGSPP 31
P PG+ GP P P SAL GG+PP
Sbjct: 789 PPARPGSRGPAPGPPPAGSAL-GGAPP 814
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 28.9 bits (63), Expect = 7.0
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 5 PQVDPGATGPLPPSSPG-WSALPGGSPPGW 33
P V PG P+P SPG W P S W
Sbjct: 341 PSVSPGPWKPIPSVSPGPWKPTPSVSSASW 370
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 28.9 bits (63), Expect = 7.0
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 237 ETGVSPATAEGPENLEDAPLLPGNSCPNERPLMQTELHQLVPEAEPEEMARQLLAVFGGY 296
+ G +PAT+ PE G + + E Q + E +A Q L V
Sbjct: 1396 QDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVV---- 1451
Query: 297 YIRLLVTSQLPQAMGTRHTNSPRIPCP 323
L + P+A TR ++PR P P
Sbjct: 1452 --GLAPCTPAPEAASTRDASAPREPLP 1476
>gi|208431817 protein kinase-like protein SgK493 [Homo sapiens]
Length = 493
Score = 28.9 bits (63), Expect = 7.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 5 PQVDPGATGPLPPSSPGWSALPGGSPPGWGQEL 37
P+ P PL +PGW PG PG G L
Sbjct: 98 PRPRPPWARPLSDGAPGWPPAPGPGSPGPGPRL 130
>gi|170932483 N-acyl phosphatidylethanolamine phospholipase D [Homo
sapiens]
Length = 393
Score = 28.9 bits (63), Expect = 7.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 149 VLVFERHQKKANTNTDLRLAAANGALLRHRVLLGVTDTVE--GCQSVIQL-WFVYFDLEN 205
VL+ H + N+ + L G LR V LG+ D ++ GC++VI+L W+ EN
Sbjct: 181 VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWE----EN 236
Query: 206 CV 207
CV
Sbjct: 237 CV 238
>gi|170932481 N-acyl phosphatidylethanolamine phospholipase D [Homo
sapiens]
Length = 393
Score = 28.9 bits (63), Expect = 7.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 149 VLVFERHQKKANTNTDLRLAAANGALLRHRVLLGVTDTVE--GCQSVIQL-WFVYFDLEN 205
VL+ H + N+ + L G LR V LG+ D ++ GC++VI+L W+ EN
Sbjct: 181 VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWE----EN 236
Query: 206 CV 207
CV
Sbjct: 237 CV 238
>gi|239582765 ral guanine nucleotide dissociation stimulator-like 3
isoform 1 [Homo sapiens]
Length = 716
Score = 28.5 bits (62), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 1 MACEPQVDPGATGPLPPSSPGWSALPGGSPP 31
+ P V PG+ PPSSP P GSPP
Sbjct: 551 LCISPSVSPGS----PPSSPRSRDAPAGSPP 577
>gi|7662647 phosphatidylserine synthase 1 [Homo sapiens]
Length = 473
Score = 28.5 bits (62), Expect = 9.1
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 104 LAFAVVFYVVVWANIYSTSQMFALGNHWA-GMLLVTLAAVSLTLTLVLVFE 153
+ +AV +V+ W I S +FA G+ W M + + + L T+ + +E
Sbjct: 147 MEYAVNCHVITWERIISHFDIFAFGHFWGWAMKALLIRSYGLCWTISITWE 197
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 28.5 bits (62), Expect = 9.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 13/60 (21%)
Query: 4 EPQVDPGATGPLPPSSPGWSALPG------------GSPPGWGQELHNGQVLTVLRIDNT 51
EP+ P A GPLPP P +PG G+P G G + LTV+ I+++
Sbjct: 828 EPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALE-EDLTVININSS 886
>gi|33300663 polycomb group ring finger 5 [Homo sapiens]
Length = 256
Score = 28.5 bits (62), Expect = 9.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 31 PGWGQELHNGQVLTVLRIDNTCAPISFDL--GAAEEQLQ 67
P G ++H L +LR+DNT I F L G E++L+
Sbjct: 54 PRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELE 92
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 28.5 bits (62), Expect = 9.1
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 211 SDHVQEMKTSQESLLRSRLSQLCV-VMETGVSPATAEGPENLEDAPLLPGNSCPNERPLM 269
S+ +E + + L+ R+ +L +++ GVS T+ GP +++D+ L GN E +
Sbjct: 1767 SEDCRESEIETNTELKERVKELSEGIVDEGVS--TSIGPHSIDDSNLNHGNRYMWEGEVK 1824
Query: 270 QTELHQLVPEAE 281
Q L + EAE
Sbjct: 1825 QPNLLMIDKEAE 1836
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 28.5 bits (62), Expect = 9.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 5 PQVDPGATGPLPPSSPGWSALPGGSPPG 32
PQ+ PG T LP S P G PPG
Sbjct: 189 PQLGPGQTTQLPLSESSVPGAPHGPPPG 216
>gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]
Length = 388
Score = 28.5 bits (62), Expect = 9.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 2 ACEPQVDPGATGPLPPSSPGWSALPGGSPPGWG 34
A P PG P P+ P WS+ GS G G
Sbjct: 28 AASPTPGPGPAPPAAPAPPRWSSSGSGSGSGSG 60
>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
sapiens]
Length = 1819
Score = 28.5 bits (62), Expect = 9.1
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 15 LPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWGIQVP 74
LPPS+PG + + P QE TVLR +P L AAE L + G+Q+
Sbjct: 929 LPPSAPGEAPAAASTQPSRPQEY---DFSTVLRPAVATSPAPGPLQAAECSLGSSGLQLW 985
Query: 75 AD 76
D
Sbjct: 986 ED 987
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,066,138
Number of Sequences: 37866
Number of extensions: 661753
Number of successful extensions: 3230
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3200
Number of HSP's gapped (non-prelim): 51
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.