Guide to the Human Genome
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Name: C9orf91 Sequence: fasta or formatted (342aa) NCBI GI: 33356142
Description:

hypothetical protein LOC203197

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         30           3
 C cysteine            2.9         10           2
 D aspartate           2.6          9           1
 E glutamate           6.4         22           2
 F phenylalanine       2.9         10           1
 G glycine             6.7         23           2
 H histidine           2.0          7           1
 I isoleucine          3.2         11           2
 K lysine              0.9          3           2
 L leucine            13.5         46           2
 M methionine          2.6          9           1
 N asparagine          3.8         13           1
 P proline             7.6         26           2
 Q glutamine           6.4         22           1
 R arginine            5.3         18           2
 S serine              6.1         21           2
 T threonine           5.8         20           1
 V valine              7.9         27           3
 W tryptophan          1.8          6           1
 Y tyrosine            2.6          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC203197 
FOXP4                 0.010   forkhead box P4 isoform 3 
FOXP4                 0.010   forkhead box P4 isoform 2 
FOXP4                 0.010   forkhead box P4 isoform 1 
COL7A1                0.010   alpha 1 type VII collagen precursor 
LOC401321             0.009   PREDICTED: hypothetical protein 
LOC401321             0.009   PREDICTED: hypothetical protein 
LOC401321             0.009   PREDICTED: hypothetical protein 
LOC401321             0.009   PREDICTED: hypothetical protein 
CACNA1H               0.009   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.009   calcium channel, voltage-dependent, T type, alpha 1H...
EHBP1L1               0.007   tangerin 
FMNL1                 0.007   formin-like 1 
FRMPD1                0.007   FERM and PDZ domain containing 1 
DNM1                  0.006   dynamin 1 isoform 2 
DNM1                  0.006   dynamin 1 isoform 1 
ZNF828                0.006   zinc finger protein 828 
WNK2                  0.006   WNK lysine deficient protein kinase 2 
SGK493                0.006   protein kinase-like protein SgK493 
NAPEPLD               0.006   N-acyl phosphatidylethanolamine phospholipase D [Ho...
NAPEPLD               0.006   N-acyl phosphatidylethanolamine phospholipase D [Ho...
RGL3                  0.004   ral guanine nucleotide dissociation stimulator-like...
PTDSS1                0.004   phosphatidylserine synthase 1 
PELP1                 0.004   proline, glutamic acid and leucine rich protein 1 [...
PCGF5                 0.004   polycomb group ring finger 5 
ZNF318                0.004   zinc finger protein 318 
BCL9L                 0.004   B-cell CLL/lymphoma 9-like 
ZDHHC18               0.004   zinc finger, DHHC-type containing 18 
TUBGCP6               0.004   tubulin, gamma complex associated protein 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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