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Search of human proteins with 33300670
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33300670 hypothetical protein LOC84331 [Homo sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33300670 hypothetical protein LOC84331 [Homo sapiens] 338 9e-94
gi|148229977 hypothetical protein LOC348262 [Homo sapiens] 72 3e-13
gi|126722894 hypothetical protein LOC348262 [Homo sapiens] 72 3e-13
gi|24497513 homeobox A3 isoform a [Homo sapiens] 39 0.002
gi|13562112 homeobox A3 isoform a [Homo sapiens] 39 0.002
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 37 0.006
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho... 37 0.006
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 37 0.006
gi|238859557 regulatory factor X1 [Homo sapiens] 36 0.016
gi|7706469 Kruppel-like factor [Homo sapiens] 35 0.027
gi|45827729 scribble isoform b [Homo sapiens] 35 0.027
gi|45827731 scribble isoform a [Homo sapiens] 35 0.027
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 35 0.036
gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform... 35 0.036
gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ... 35 0.036
gi|7706501 WW domain binding protein 11 [Homo sapiens] 34 0.047
gi|87299628 biorientation of chromosomes in cell division 1-like... 34 0.061
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 34 0.061
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 34 0.061
gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo ... 33 0.080
gi|57222570 codanin 1 [Homo sapiens] 33 0.080
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 33 0.14
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.14
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 33 0.14
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 33 0.14
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 33 0.14
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 33 0.14
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 33 0.14
gi|157785645 SPEG complex locus [Homo sapiens] 32 0.18
gi|223278393 protein phosphatase 1, regulatory (inhibitor) subun... 32 0.23
>gi|33300670 hypothetical protein LOC84331 [Homo sapiens]
Length = 160
Score = 338 bits (868), Expect = 9e-94
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MYTITKGPSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLS 60
MYTITKGPSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLS
Sbjct: 1 MYTITKGPSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLS 60
Query: 61 SPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHEENVRFVSEAWQQVQQQLDGGPAGEG 120
SPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHEENVRFVSEAWQQVQQQLDGGPAGEG
Sbjct: 61 SPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHEENVRFVSEAWQQVQQQLDGGPAGEG 120
Query: 121 GPRPVQYVERTPNPRLQNFVPIDLDEWWAQQFLARITSCS 160
GPRPVQYVERTPNPRLQNFVPIDLDEWWAQQFLARITSCS
Sbjct: 121 GPRPVQYVERTPNPRLQNFVPIDLDEWWAQQFLARITSCS 160
>gi|148229977 hypothetical protein LOC348262 [Homo sapiens]
Length = 97
Score = 71.6 bits (174), Expect = 3e-13
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 10/90 (11%)
Query: 60 SSPGPRLVFNRVNGRR--APSTSPSFEGTQETYTVAHEENVRFVSEAWQQVQQQLDGG-P 116
SSP R+V+N G+R +P + PS + E +T AHEENVRF+ EAWQ V++ L G P
Sbjct: 3 SSPVSRVVYN---GKRTSSPRSPPS---SSEIFTPAHEENVRFIYEAWQGVERDLRGQVP 56
Query: 117 AGEGGPRPVQYVERTPNPRLQNFVPIDLDE 146
GE G +YVE+ PNP L+ F PIDL +
Sbjct: 57 GGERG-LVEEYVEKVPNPSLKTFKPIDLSD 85
>gi|126722894 hypothetical protein LOC348262 [Homo sapiens]
Length = 97
Score = 71.6 bits (174), Expect = 3e-13
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 10/90 (11%)
Query: 60 SSPGPRLVFNRVNGRR--APSTSPSFEGTQETYTVAHEENVRFVSEAWQQVQQQLDGG-P 116
SSP R+V+N G+R +P + PS + E +T AHEENVRF+ EAWQ V++ L G P
Sbjct: 3 SSPVSRVVYN---GKRTSSPRSPPS---SSEIFTPAHEENVRFIYEAWQGVERDLRGQVP 56
Query: 117 AGEGGPRPVQYVERTPNPRLQNFVPIDLDE 146
GE G +YVE+ PNP L+ F PIDL +
Sbjct: 57 GGERG-LVEEYVEKVPNPSLKTFKPIDLSD 85
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 36 QPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHE 95
Q APP QPP QP QPP P P + P P N P+ + + + +
Sbjct: 96 QAAPPAPQPP--QPAPQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAK 153
Query: 96 ENVRFVSEAWQQVQQQLDGGPAGE 119
+ ++ E+ Q +Q+ +GE
Sbjct: 154 QIFPWMKESRQNTKQKTSSSSSGE 177
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 36 QPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHE 95
Q APP QPP QP QPP P P + P P N P+ + + + +
Sbjct: 96 QAAPPAPQPP--QPAPQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAK 153
Query: 96 ENVRFVSEAWQQVQQQLDGGPAGE 119
+ ++ E+ Q +Q+ +GE
Sbjct: 154 QIFPWMKESRQNTKQKTSSSSSGE 177
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 37.4 bits (85), Expect = 0.006
Identities = 36/119 (30%), Positives = 44/119 (36%), Gaps = 12/119 (10%)
Query: 18 GPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAP 77
GP EGR G P PP+ P Q + P P P PGP +G R
Sbjct: 1386 GPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLW 1445
Query: 78 STSPSFEGTQETYTVAHEENVRFVSEAWQ-QVQQQLDGGPAGEGGPRPVQYVERTPNPR 135
+T + G V V E W V +Q + + G R VQ RTP PR
Sbjct: 1446 ATRQAMLG-----------QVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPR 1493
>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
sapiens]
Length = 1336
Score = 37.4 bits (85), Expect = 0.006
Identities = 36/119 (30%), Positives = 44/119 (36%), Gaps = 12/119 (10%)
Query: 18 GPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAP 77
GP EGR G P PP+ P Q + P P P PGP +G R
Sbjct: 971 GPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLW 1030
Query: 78 STSPSFEGTQETYTVAHEENVRFVSEAWQ-QVQQQLDGGPAGEGGPRPVQYVERTPNPR 135
+T + G V V E W V +Q + + G R VQ RTP PR
Sbjct: 1031 ATRQAMLG-----------QVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPR 1078
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 37.4 bits (85), Expect = 0.006
Identities = 36/119 (30%), Positives = 44/119 (36%), Gaps = 12/119 (10%)
Query: 18 GPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAP 77
GP EGR G P PP+ P Q + P P P PGP +G R
Sbjct: 1151 GPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLW 1210
Query: 78 STSPSFEGTQETYTVAHEENVRFVSEAWQ-QVQQQLDGGPAGEGGPRPVQYVERTPNPR 135
+T + G V V E W V +Q + + G R VQ RTP PR
Sbjct: 1211 ATRQAMLG-----------QVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPR 1258
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 35.8 bits (81), Expect = 0.016
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 36 QPAPPTSQPPRAQPFA--QPPGPWPLSSPGP 64
Q APP SQPP+A P A QPP P P ++P P
Sbjct: 10 QAAPPPSQPPQAPPQAQPQPPPPPPPAAPQP 40
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 35.0 bits (79), Expect = 0.027
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 4 ITKGPSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPG 63
+T+GP L + GP + G G +P PP PP P GP L +PG
Sbjct: 140 LTRGPRGLKREGAPGPAASCMRGPGG------RPPPPPDTPP-----LSPDGPARLPAPG 188
Query: 64 PRLVF 68
PR F
Sbjct: 189 PRASF 193
Score = 28.9 bits (63), Expect = 2.0
Identities = 15/49 (30%), Positives = 20/49 (40%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEG 85
P PP PP A + +P P P S+P LV + P+ G
Sbjct: 62 PEPPPPPPPPAFYYPEPGAPPPYSAPAGGLVSELLRPELDAPLGPALHG 110
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 35.0 bits (79), Expect = 0.027
Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 22/117 (18%)
Query: 38 APPTSQPPRAQPFAQPPGPWPLSSPGPRLVFN----------RVNGRRAPSTSPSFEGTQ 87
A PTS PP P AQPP P P +SP +L F RV P S G
Sbjct: 1326 AVPTSHPPEDAP-AQPPTPGPAASP-EQLSFRERQKYFELEVRVPQAEGPPKRVSLVGAD 1383
Query: 88 ETYTVAHEE----------NVRFVSEAWQQVQQQLDGGPAGEGGPRPVQYVERTPNP 134
+ + EE +R +EA + + LDG GE Q +P+P
Sbjct: 1384 DLRKMQEEEARKLQQKRAQMLREAAEAGAEARLALDGETLGEEEQEDEQPPWASPSP 1440
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 35.0 bits (79), Expect = 0.027
Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 22/117 (18%)
Query: 38 APPTSQPPRAQPFAQPPGPWPLSSPGPRLVFN----------RVNGRRAPSTSPSFEGTQ 87
A PTS PP P AQPP P P +SP +L F RV P S G
Sbjct: 1326 AVPTSHPPEDAP-AQPPTPGPAASP-EQLSFRERQKYFELEVRVPQAEGPPKRVSLVGAD 1383
Query: 88 ETYTVAHEE----------NVRFVSEAWQQVQQQLDGGPAGEGGPRPVQYVERTPNP 134
+ + EE +R +EA + + LDG GE Q +P+P
Sbjct: 1384 DLRKMQEEEARKLQQKRAQMLREAAEAGAEARLALDGETLGEEEQEDEQPPWASPSP 1440
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 34.7 bits (78), Expect = 0.036
Identities = 15/28 (53%), Positives = 15/28 (53%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLSSPGP 64
PAPP QPP P A PPGP P P
Sbjct: 28 PAPPQQQPPPPPPPAPPPGPGPAPPQHP 55
Score = 30.8 bits (68), Expect = 0.52
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLSSPGP 64
P PP PP+ QP PP P P PGP
Sbjct: 23 PPPPPPAPPQQQP-PPPPPPAPPPGPGP 49
Score = 28.5 bits (62), Expect = 2.6
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 6/93 (6%)
Query: 44 PPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHEENVRFVSE 103
PP P A PGP P +SP RAP TSP + G R +S
Sbjct: 762 PPGPAPAAASPGPPPPASPP-----GAPASPRAPRTSP-YGGLPAAPLAGPALPARRLSR 815
Query: 104 AWQQVQQQLDGGPAGEGGPRPVQYVERTPNPRL 136
A + + P G GP + PRL
Sbjct: 816 ASRPLSASQPSLPHGAPGPAASTRPASSSTPRL 848
Score = 27.7 bits (60), Expect = 4.4
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 37 PAP-PTSQPPRAQPFAQ-PPGPWPLSSPGP 64
PAP P PP A P Q PP P P PGP
Sbjct: 18 PAPGPPPPPPPAPPQQQPPPPPPPAPPPGP 47
Score = 26.9 bits (58), Expect = 7.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLSSPGP 64
P PP + P + P PP P P P P
Sbjct: 24 PPPPPAPPQQQPPPPPPPAPPPGPGPAP 51
>gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 34.7 bits (78), Expect = 0.036
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 20 TQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVF 68
+ Q+V+ R+ L P PP Q P+ +P A+P WPL PGP L+F
Sbjct: 243 SMQEVQARVQSLES--MPRPP-EQRPQPRPSARP---WPLGLPGPALLF 285
>gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 34.7 bits (78), Expect = 0.036
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 20 TQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVF 68
+ Q+V+ R+ L P PP Q P+ +P A+P WPL PGP L+F
Sbjct: 243 SMQEVQARVQSLES--MPRPP-EQRPQPRPSARP---WPLGLPGPALLF 285
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 34.3 bits (77), Expect = 0.047
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 35 RQPAPPTS----QPPRAQPFAQPPGPWPLSSPGPRLV 67
R P PPT PP A PF +PPG L P PRL+
Sbjct: 422 RPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLL 458
Score = 30.4 bits (67), Expect = 0.68
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 26 GRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGP 64
G G L + P PP +PP PPGP P PGP
Sbjct: 449 GLRGPLPRLLPPGPPPGRPP-----GPPPGPPPGLPPGP 482
Score = 28.5 bits (62), Expect = 2.6
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLSSPGP 64
P PP PP A P +PPGP PGP
Sbjct: 408 PGPPPLGPPPAPPL-RPPGPPTGLPPGP 434
Score = 27.7 bits (60), Expect = 4.4
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 35 RQPAPPTSQPPRAQPFAQPPGPWP-LSSPGP 64
R P PP PP P P GP P L P P
Sbjct: 466 RPPGPPPGPPPGLPPGPPPRGPPPRLPPPAP 496
Score = 27.3 bits (59), Expect = 5.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 35 RQPAPPTSQPPRAQPFAQPPGPWPLSSP 62
+Q APP S PP PGP PL P
Sbjct: 389 QQQAPPQSVPPSQIQAPPMPGPPPLGPP 416
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 33.9 bits (76), Expect = 0.061
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 36 QPAPPTSQPPRAQPFAQPPGPWPLSSPGP 64
QP PP PP QP QPP P P GP
Sbjct: 8 QPPPPAPPPPPPQPQPQPPPPPPGPGAGP 36
Score = 30.0 bits (66), Expect = 0.88
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLSSPG 63
PAPP PP+ QP PP P P + PG
Sbjct: 12 PAPPPP-PPQPQPQPPPPPPGPGAGPG 37
Score = 28.9 bits (63), Expect = 2.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Query: 36 QPAPPTSQPPRAQPFAQPPGPWPLSSPG 63
QP PP PP P QP P P PG
Sbjct: 6 QPQPPPPAPPPPPPQPQPQPPPPPPGPG 33
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 33.9 bits (76), Expect = 0.061
Identities = 30/109 (27%), Positives = 36/109 (33%), Gaps = 14/109 (12%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYT-VAHE 95
P PP PP A P P P+ P P L P + E E YT E
Sbjct: 32 PPPPPPAPPPAPPLLSEASPEPIPEPCPELA-------PGPCPEATSESATELYTEPTPE 84
Query: 96 ENVRFVSEAWQQVQQQLDGGPAGEGGPRPV------QYVERTPNPRLQN 138
SE + + PA E P P E TP P L++
Sbjct: 85 PATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALES 133
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 33.9 bits (76), Expect = 0.061
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 36 QPAPPTS-QPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPST-SPSFEGTQETYTVA 93
QP PPTS +PPR+ P P +PGP + G+R P SP + +E +A
Sbjct: 154 QPTPPTSPEPPRSSPRQTP-------APGP--AREKSAGKRGPDRGSPEYRQRRERNNIA 204
Query: 94 HEENVRFVSEAWQQVQQQL 112
++ Q++QQ+L
Sbjct: 205 VRKSRDKAKRRNQEMQQKL 223
>gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo
sapiens]
Length = 324
Score = 33.5 bits (75), Expect = 0.080
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 38 APPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHEEN 97
AP S P R P +PP P P P L GR A + P + G + T AH
Sbjct: 104 APEDSAPRRFAPDPRPPEPRP---PQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHP- 159
Query: 98 VRFVSEAWQQVQQQLDGGPAGEGGP-RPVQYVERTPNP 134
+R E + GG G G P +P+ R+P P
Sbjct: 160 LRLPEEPPSHWRSLRAGG--GRGAPVQPLSVNRRSPTP 195
>gi|57222570 codanin 1 [Homo sapiens]
Length = 1227
Score = 33.5 bits (75), Expect = 0.080
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 3 TITKGPSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSP 62
++ GP+ RR PT E L + C +PP S P +QP A PW L P
Sbjct: 183 SVPPGPTGTKPSRRINPTPVSEERSLSKPKTCFT-SPPISCVPSSQPSALDTSPWGLGLP 241
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 32.7 bits (73), Expect = 0.14
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 22/135 (16%)
Query: 3 TITKGP-------SKLVAQRRTGPTQQQ---VEGRLGELLKCRQPAPPTS--QPPRAQPF 50
TI++GP R GP Q ++ + L + PA P +PP +P
Sbjct: 1055 TISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPV 1114
Query: 51 AQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVAHEENVRFVSEAWQQVQQ 110
A P P P P P +G R+P+ + G ++ ++N + + Q
Sbjct: 1115 APPTRPAPPQRPPP------PSGARSPAPTRKEFGAPKSPGTTRKDN---IGRSQPSPQA 1165
Query: 111 QLDG-GPAGEGGPRP 124
L G GPAG RP
Sbjct: 1166 GLAGPGPAGYSTARP 1180
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 38 APPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPS 82
A PT PPRA P PP P +P PR R +P+ +PS
Sbjct: 625 ASPTETPPRASPTGTPPRASPTGTP-PRASPTGTPPRASPTGTPS 668
Score = 30.8 bits (68), Expect = 0.52
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 31 LLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPS 82
+ K A PT PPRA P PP P +P R +P+ SPS
Sbjct: 421 ITKMDSTASPTRTPPRASPTGTPPRASPTGTPS-RASPTGTQSTASPTGSPS 471
Score = 28.5 bits (62), Expect = 2.6
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 16 RTGPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRR 75
RT PT L K A T PPRA P PP P +P PR R
Sbjct: 597 RTSPTGMPSSALL---TKMDSTASITRTPPRASPTETPPRASPTGTP-PRASPTGTPPRA 652
Query: 76 APSTSP 81
+P+ +P
Sbjct: 653 SPTGTP 658
Score = 26.9 bits (58), Expect = 7.5
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 38 APPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPS 82
A PT PPRA P PP P L+ R P SP+
Sbjct: 218 ASPTGTPPRASPTGSPPRASLSMMPSTALLI-----RTPPRASPT 257
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 32.7 bits (73), Expect = 0.14
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Query: 34 CRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVA 93
C P PP PP+ PP P P ++P R GR +P+F + E +
Sbjct: 331 CPSPLPPPPAPPKG-----PPAP-PAATPAGVYTVFREQGREHRVVAPTFVPSVEAFD-E 383
Query: 94 HEENVRFVSEAWQQVQQQLDGGPAG-----EGGPRPVQYVE 129
++ S+A ++ + G G G PRP+ E
Sbjct: 384 RPGPIQIASQARDARAREREAGRPGVLQAPPGSPRPLDRPE 424
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 32.7 bits (73), Expect = 0.14
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 2 YTITKGPSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPP-TSQPPRAQPFAQPPGPWPLS 60
Y I + + AQR P+ ++ +L LL R P PP PPR PF P PWP +
Sbjct: 414 YDILQSCWRPPAQR---PSASDLQLQLTYLLSERPPRPPPPPPPPRDGPF---PWPWPPA 467
Query: 61 SPGPR 65
PR
Sbjct: 468 HSAPR 472
Score = 28.9 bits (63), Expect = 2.0
Identities = 29/93 (31%), Positives = 34/93 (36%), Gaps = 27/93 (29%)
Query: 37 PAPPTSQPPR---AQPFAQPPGPWPLSSPGPRLVFNRVNGRRAPSTSPSFEGTQETYTVA 93
PAPP PP A P A P P ++SPG +G +P P G
Sbjct: 780 PAPPPPPPPPRAPADPAASPDPPSAVASPG--------SGLSSPGPKPGDSG-------- 823
Query: 94 HEENVRFVSEAWQQVQQQLDGGPAG--EGGPRP 124
+E F E GG A EG PRP
Sbjct: 824 YETETPFSPEG------AFPGGGAAEEEGVPRP 850
Score = 28.5 bits (62), Expect = 2.6
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 35 RQPAPPTSQPPRAQPFAQPPGPWPLSSPGPR 65
R APP +PP PP P PL PGPR
Sbjct: 849 RPRAPP--EPPDPGAPRPPPDPGPLPLPGPR 877
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 32.7 bits (73), Expect = 0.14
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 27 RLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPR 65
R G + R P PP PP A P P P P ++PGPR
Sbjct: 87 RRGSPERARPPPPP---PPPAPPRPPPAAPSPPAAPGPR 122
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 32.7 bits (73), Expect = 0.14
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 27 RLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPR 65
R G + R P PP PP A P P P P ++PGPR
Sbjct: 87 RRGSPERARPPPPP---PPPAPPRPPPAAPSPPAAPGPR 122
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo
sapiens]
Length = 2161
Score = 32.7 bits (73), Expect = 0.14
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 37 PAPPTSQPPRAQPFAQPPGPWPLS--SPGPR-LVFNRVNGRRAPSTSP-SFEG 85
P PPT+ PP P++ PP P +P PR FN +G P++SP SF+G
Sbjct: 921 PPPPTTSPPEP-PYSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDG 972
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 32.3 bits (72), Expect = 0.18
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 12/67 (17%)
Query: 39 PPTSQPPRAQPFAQP--------PGPW-PLSSPGPRLVFNRVNGRRAPSTSPSFEGTQET 89
P T + RA P A+ GPW P G R ++ GRRA TSP E + ++
Sbjct: 654 PQTLEKNRAGPEAEKRLRRGPEEDGPWGPWDRRGAR---SQGKGRRARPTSPELESSDDS 710
Query: 90 YTVAHEE 96
Y A EE
Sbjct: 711 YVSAGEE 717
Score = 28.9 bits (63), Expect = 2.0
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 6 KGPSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPR 65
+GP + V +R P R + +CR P PP P A PP + PG +
Sbjct: 584 EGPQQEVRRRDQFPLT-----RSRAIQECRSPVPP--------PAADPPEARTKAPPGRK 630
Query: 66 LVFNRVNGRRAPSTSPSFEGTQETYTVAHEENVRFVSEAWQQVQQQLDGGPAGEG 120
R P +P EG T+ E+N A + +++L GP +G
Sbjct: 631 REPPAQAVRFLPWATPGLEGAAVPQTL--EKN-----RAGPEAEKRLRRGPEEDG 678
Score = 26.9 bits (58), Expect = 7.5
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 17/70 (24%)
Query: 38 APPTSQPPRAQPFAQPPGPWPLS----SPGPRLVFNRVNGRRAPSTSPSFEGT------- 86
APP +PP +P PP P ++ SP +V + + +P +SP EGT
Sbjct: 2909 APPAPEPPAPEP---PPEPTKVTVQSLSPAKEVVSSPGS---SPRSSPRPEGTTLRQGPP 2962
Query: 87 QETYTVAHEE 96
Q+ YT E+
Sbjct: 2963 QKPYTFLEEK 2972
>gi|223278393 protein phosphatase 1, regulatory (inhibitor) subunit
3G [Homo sapiens]
Length = 358
Score = 32.0 bits (71), Expect = 0.23
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 8 PSKLVAQRRTGPTQQQVEGRLGELLKCRQPAPPTSQPP-RAQPFAQPPGPWPLSSPGPRL 66
P ++++ R+ P + + +LG LL A P S PP R +P Q PGP S+ RL
Sbjct: 157 PPAVLSRLRSFPMRAEDLEQLGGLLAAAAVAAPLSAPPSRLRPLFQLPGP---SAAAERL 213
Query: 67 VFNRVNGRRAPSTSPS 82
RV R ++ S
Sbjct: 214 QRQRVCLERVQCSTAS 229
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,068,662
Number of Sequences: 37866
Number of extensions: 593950
Number of successful extensions: 4698
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 3608
Number of HSP's gapped (non-prelim): 1145
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.