Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 33239445
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33239445 eukaryotic translation initiation factor 3, subunit
9 eta, 116kDa [Homo sapiens]
(814 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33239445 eukaryotic translation initiation factor 3, subunit ... 1671 0.0
gi|83367072 eukaryotic translation initiation factor 3, subunit ... 1671 0.0
gi|54873624 eukaryotic translation initiation factor 2A [Homo sa... 89 2e-17
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 59 2e-08
gi|30795231 brain abundant, membrane attached signal protein 1 [... 56 1e-07
gi|33286446 opioid growth factor receptor [Homo sapiens] 53 1e-06
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 53 1e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 2e-06
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 50 6e-06
gi|193083172 nuclear assembly factor 1 homolog isoform b [Homo s... 50 8e-06
gi|193083157 nuclear assembly factor 1 homolog isoform a [Homo s... 50 8e-06
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 49 1e-05
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 48 3e-05
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 48 3e-05
gi|117938759 GNAS complex locus XLas [Homo sapiens] 48 4e-05
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 48 4e-05
gi|153070260 myristoylated alanine-rich protein kinase C substra... 47 5e-05
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 47 9e-05
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 47 9e-05
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 47 9e-05
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 47 9e-05
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 47 9e-05
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 47 9e-05
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 46 1e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 46 1e-04
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 46 2e-04
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 46 2e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 46 2e-04
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 46 2e-04
gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens] 45 2e-04
>gi|33239445 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 1671 bits (4327), Expect = 0.0
Identities = 814/814 (100%), Positives = 814/814 (100%)
Query: 1 MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA 60
MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA
Sbjct: 1 MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA 60
Query: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR 120
GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR
Sbjct: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR 120
Query: 121 AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA 180
AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA
Sbjct: 121 AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA 180
Query: 181 DGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASP 240
DGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASP
Sbjct: 181 DGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASP 240
Query: 241 AHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEA 300
AHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEA
Sbjct: 241 AHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEA 300
Query: 301 ECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALW 360
ECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALW
Sbjct: 301 ECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALW 360
Query: 361 GGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC 420
GGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC
Sbjct: 361 GGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC 420
Query: 421 ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIA 480
ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIA
Sbjct: 421 ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIA 480
Query: 481 FWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGV 540
FWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGV
Sbjct: 481 FWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGV 540
Query: 541 VTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKI 600
VTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKI
Sbjct: 541 VTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKI 600
Query: 601 ELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWD 660
ELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWD
Sbjct: 601 ELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWD 660
Query: 661 PTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQI 720
PTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQI
Sbjct: 661 PTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQI 720
Query: 721 KKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRG 780
KKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRG
Sbjct: 721 KKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRG 780
Query: 781 GVDTDELDSNVDDWEEETIEFFVTEEIIPLGNQE 814
GVDTDELDSNVDDWEEETIEFFVTEEIIPLGNQE
Sbjct: 781 GVDTDELDSNVDDWEEETIEFFVTEEIIPLGNQE 814
>gi|83367072 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 1671 bits (4327), Expect = 0.0
Identities = 814/814 (100%), Positives = 814/814 (100%)
Query: 1 MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA 60
MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA
Sbjct: 1 MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA 60
Query: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR 120
GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR
Sbjct: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR 120
Query: 121 AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA 180
AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA
Sbjct: 121 AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA 180
Query: 181 DGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASP 240
DGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASP
Sbjct: 181 DGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASP 240
Query: 241 AHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEA 300
AHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEA
Sbjct: 241 AHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEA 300
Query: 301 ECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALW 360
ECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALW
Sbjct: 301 ECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALW 360
Query: 361 GGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC 420
GGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC
Sbjct: 361 GGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC 420
Query: 421 ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIA 480
ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIA
Sbjct: 421 ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIA 480
Query: 481 FWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGV 540
FWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGV
Sbjct: 481 FWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGV 540
Query: 541 VTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKI 600
VTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKI
Sbjct: 541 VTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKI 600
Query: 601 ELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWD 660
ELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWD
Sbjct: 601 ELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWD 660
Query: 661 PTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQI 720
PTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQI
Sbjct: 661 PTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQI 720
Query: 721 KKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRG 780
KKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRG
Sbjct: 721 KKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRG 780
Query: 781 GVDTDELDSNVDDWEEETIEFFVTEEIIPLGNQE 814
GVDTDELDSNVDDWEEETIEFFVTEEIIPLGNQE
Sbjct: 781 GVDTDELDSNVDDWEEETIEFFVTEEIIPLGNQE 814
>gi|54873624 eukaryotic translation initiation factor 2A [Homo
sapiens]
Length = 585
Score = 88.6 bits (218), Expect = 2e-17
Identities = 91/396 (22%), Positives = 161/396 (40%), Gaps = 39/396 (9%)
Query: 339 YVRWSPKGTYLATFHQRG-IALWGGEKFKQIQRFSHQGVQ---------LIDFSPCERYL 388
+ R S K + F + G + WG + I +++G+ ++FSP L
Sbjct: 31 FPRESGKNCKVCIFSKDGTLFAWGNGEKVNIISVTNKGLLHSFDLLKAVCLEFSPKNTVL 90
Query: 389 VTFSPLMDTQDDPQAII---IWDILTGHKKRGFHCESSAHWPIFKWSHDGKFFARMTLDT 445
T+ P ++D I ++D+ TG + F + +W WS D AR +
Sbjct: 91 ATWQPYTTSKDGTAGIPNLQLYDVKTGTCLKSFIQKKMQNW-CPSWSEDETLCARNVNNE 149
Query: 446 LSIYETPSMGLLDKKSLKISGIKDFSWSPGGNI--IAFWVPEDKDIPARVTLMQLPT--- 500
+ +E + + K L + I DF SPG +A +VP K P+ V L Q P
Sbjct: 150 VHFFENNNFNTIANK-LHLQKINDFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAG 208
Query: 501 -RQEIRVRNLFNVVDCKLHWQKNGDYLCV----KVDRTPKGTQGVVTNFEIFRMREKQVP 555
+ ++ F + W K + V VD+T G T I E V
Sbjct: 209 PHAALANKSFFKADKVTMLWNKKATAVLVIASTDVDKTGASYYGEQTLHYIATNGESAV- 267
Query: 556 VDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANT 613
V++ + I W + ++F ++G P + F N K + + F N
Sbjct: 268 ---VQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATIF-----NLKCDPVFDFGTGPRNA 319
Query: 614 IFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWW 673
++SP G +VLAG ++ G + D + +++ ++ W P G +++T+
Sbjct: 320 AYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAP 379
Query: 674 SHKVDNAYWLWTFQGRLLQK---NNKDRFCQLLWRP 706
+V+N Y +W + G +L K + Q+ W+P
Sbjct: 380 RLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQP 415
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 58.5 bits (140), Expect = 2e-08
Identities = 71/223 (31%), Positives = 92/223 (41%), Gaps = 46/223 (20%)
Query: 11 EAAE-ERAEPGQQQPAAEPPP-AEGLLRPAGPGAP--EAAGTEAS--SEEV--------- 55
EAAE E PG Q P P P AE RP PGA EA G E S +EE
Sbjct: 3 EAAEPEGVAPGPQGPPEVPAPLAE---RPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKE 59
Query: 56 ---GIAEAGPESEVRTEPAA--EAEAASG-PSESPSPPAAEELPGSH----AEPPVPAQG 105
G + GPE+E R A E EA G P + P EE G+ A P AQG
Sbjct: 60 AGGGGPDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQGGEETSGAQQVEGASPGRGAQG 119
Query: 106 EAPGEQARD----------ERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSD 155
E GE R+ E ++ R + A G G + +AE +N +A+ P+
Sbjct: 120 EPRGEAQREPEDSAAPERQEEAEQRPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPA--- 176
Query: 156 PEDFVDDVSEEELLGDVLKDRPQEADGIDSV-IVVDNVPQVGP 197
D V E +GD + D +D+ + DN+ GP
Sbjct: 177 ----GDSVEAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQAEGP 215
Score = 39.3 bits (90), Expect = 0.015
Identities = 53/199 (26%), Positives = 74/199 (37%), Gaps = 20/199 (10%)
Query: 5 ENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPES 64
E VP+ EE + Q + A+ A+G R PE + A PE
Sbjct: 91 EGAEVPQGGEETSGAQQVEGASPGRGAQGEPRGEAQREPEDS-------------AAPER 137
Query: 65 EVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQA- 123
+ E E S E+ AE G + E PA E + D+ A
Sbjct: 138 QEEAEQRPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAG 197
Query: 124 VSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFV----DDVSEEELLGDVLKDRPQE 179
S DA G G +AE A ++ DA E D D D V E +GD ++
Sbjct: 198 DSVDAEGPLGDNIQAEGPAGDSVDA-EGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPA 256
Query: 180 ADGIDS-VIVVDNVPQVGP 197
DG+++ V D+V GP
Sbjct: 257 GDGVEAGVPAGDSVEAEGP 275
Score = 38.9 bits (89), Expect = 0.019
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 74 AEAASGPSESPSPPAAEELPGSHAE---PPVPAQGEAPGEQARD--ERSDSRAQAVSEDA 128
AEAA +P P E+P AE P A GEA G + + E + A AV E
Sbjct: 2 AEAAEPEGVAPGPQGPPEVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAG 61
Query: 129 GGNEGRAAEAEPR 141
GG R EAE R
Sbjct: 62 GGGPDRGPEAEAR 74
Score = 37.4 bits (85), Expect = 0.056
Identities = 43/149 (28%), Positives = 57/149 (38%), Gaps = 13/149 (8%)
Query: 4 AENVAVPEAAEERAEPGQQQ-PAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGP 62
AE + V PG+ AAE G+ + + AP A +A + VG GP
Sbjct: 308 AEAIEVAAGESAGRSPGELAWDAAEEAEVPGV-KGSEEAAPGDARADAGEDRVG---DGP 363
Query: 63 ESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQ 122
+ E + + GP E + EE P S GEA A E S
Sbjct: 364 QQEPGEDEERRERSPEGPREEEAAGGEEESPDS------SPHGEASRGAAEPEAQLSNHL 417
Query: 123 AVSEDAGGNEGRAAEAEPRALENGDADEP 151
A A G+ G AA R E+G+A EP
Sbjct: 418 AEEGPAEGS-GEAARVNGRR-EDGEASEP 444
Score = 33.5 bits (75), Expect = 0.81
Identities = 52/176 (29%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 24 PAAEPPPAEGLLR-------PAGPGAPEAAGTEASSEEVGI-AEAGPESEVRTEPAAEAE 75
PA + AEG + PAG +A G S E G A G E+ V + EAE
Sbjct: 215 PAGDSVDAEGRVGDSVDAEGPAGDSV-DAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEAE 273
Query: 76 AASGPSESPSPPA--AEELPGS-----------HAEPPVPAQGE----APGEQARDERSD 118
+G S PA A + G AE A GE +PGE A D +
Sbjct: 274 GPAGDSMDAEGPAGRARRVSGEPQQSGDGSLSPQAEAIEVAAGESAGRSPGELAWDAAEE 333
Query: 119 SRAQAV--SEDAGGNEGRAAEAEPRALENGDADEPSFSDP--EDFVDDVSEEELLG 170
+ V SE+A + RA E R + +G EP + E + EEE G
Sbjct: 334 AEVPGVKGSEEAAPGDARADAGEDR-VGDGPQQEPGEDEERRERSPEGPREEEAAG 388
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 56.2 bits (134), Expect = 1e-07
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 2 QDAENVAVPEAAEERAEPGQQQPAAEPPPAE---GLLRPAGPGAPEAAGTEASSEEVGIA 58
++ + A A EE P + +P A PAE G +P +A E +
Sbjct: 20 KEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAK 79
Query: 59 EAGPESEV-RTEPAAEA-----------EAASGPSESPSPPAAEELPGSHAEPPVPAQGE 106
E P++E +TE AAEA +AA GP+ P A E + AE PA GE
Sbjct: 80 EEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGE 139
Query: 107 APG-EQARDERSDSRAQAVSED-------AGGNEGRAAEAEPRALENGDADEPSFSDPED 158
P E+ +++++ A +++ A ++ ++EA P + E A E S P+
Sbjct: 140 EPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTPKA 199
Query: 159 FVDDVSEEE 167
S EE
Sbjct: 200 QGPAASAEE 208
Score = 41.6 bits (96), Expect = 0.003
Identities = 38/107 (35%), Positives = 49/107 (45%), Gaps = 19/107 (17%)
Query: 10 PEAAEERAEPGQQQ-PAA--EPPPAEGLLR----PAGPGAPEAA--GTEASSEEVGIAEA 60
P+AAE A P + PAA EP EG + PA P A E G AS + G +EA
Sbjct: 120 PKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEA 179
Query: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEA 107
P S + PAA +E+PS + P + AE P P + A
Sbjct: 180 APSS--KETPAA--------TEAPSSTPKAQGPAASAEEPKPVEAPA 216
Score = 40.0 bits (92), Expect = 0.009
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 8 AVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPE--AAGTEASSEEVGIAEAGP--- 62
A P A E EP +++ EP E PA P A E + G AS + G +EA P
Sbjct: 133 AAPAAGE---EPSKEE--GEPKKTEA---PAAPAAQETKSDGAPASDSKPGSSEAAPSSK 184
Query: 63 ESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPV 101
E+ TE + A GP+ S P E P ++++ V
Sbjct: 185 ETPAATEAPSSTPKAQGPAASAEEPKPVEAPAANSDQTV 223
Score = 32.0 bits (71), Expect = 2.4
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 24/134 (17%)
Query: 44 EAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPA---AEELPGSHAEPP 100
+A + +E E G E + AAE A E P A AEE G +
Sbjct: 18 KAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGE--KDA 75
Query: 101 VPAQGEAPGEQARDERSDSRAQAVSED--------------AGGNEGRAAEAEPRALEN- 145
A+ EAP +A E+++ A+A +E AGG +AAEA E+
Sbjct: 76 AAAKEEAP--KAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESA 133
Query: 146 --GDADEPSFSDPE 157
+EPS + E
Sbjct: 134 APAAGEEPSKEEGE 147
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 53.1 bits (126), Expect = 1e-06
Identities = 45/147 (30%), Positives = 58/147 (39%), Gaps = 21/147 (14%)
Query: 17 AEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEA-- 74
A P +PA P G RPAGP E A E+ SE G AGP + E +E
Sbjct: 527 AGPAGDEPAESPSETPGP-RPAGPAGDEPA--ESPSETPGPRPAGPAGDEPAESPSETPG 583
Query: 75 ---------EAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQ--- 122
E A PSE+P P A AE P G P A DE ++S ++
Sbjct: 584 PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 643
Query: 123 ----AVSEDAGGNEGRAAEAEPRALEN 145
+ D G AAE + +E+
Sbjct: 644 PSPAGPTRDEPAKAGEAAELQDAEVES 670
Score = 49.3 bits (116), Expect = 1e-05
Identities = 47/175 (26%), Positives = 64/175 (36%), Gaps = 20/175 (11%)
Query: 9 VPEAAEERAEPGQQQPAAE---PPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESE 65
V E E R P + P + P P+ PAGP E A E+ SE G AGP +
Sbjct: 500 VEEDTEGRTGPKEGTPGSPSETPGPS-----PAGPAGDEPA--ESPSETPGPRPAGPAGD 552
Query: 66 VRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVS 125
E A PSE+P P A AE P G +P RDE ++S ++
Sbjct: 553 ---------EPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPG 603
Query: 126 EDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA 180
G G P P+ +P + + G +D P +A
Sbjct: 604 PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPT-RDEPAKA 657
Score = 40.8 bits (94), Expect = 0.005
Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 17 AEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEA 76
A P + +PA P G RPAGP E A E+ SE G AGP + E
Sbjct: 587 AGPTRDEPAESPSETPGP-RPAGPAGDEPA--ESPSETPGPRPAGPAGD---------EP 634
Query: 77 ASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRA 121
A PSE+P P A G + P A GEA Q + S +++
Sbjct: 635 AESPSETPGPSPA----GPTRDEPAKA-GEAAELQDAEVESSAKS 674
Score = 39.7 bits (91), Expect = 0.011
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 37 PAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSH 96
PA G P+A +E EE GP+ P+ P SP+ PA +E S
Sbjct: 485 PAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSET------PGPSPAGPAGDEPAESP 538
Query: 97 AEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDA-DEPSFSD 155
+E P P G++ + S++ + AG + P G DEP+ S
Sbjct: 539 SETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESP 598
Query: 156 PE 157
E
Sbjct: 599 SE 600
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 52.8 bits (125), Expect = 1e-06
Identities = 64/219 (29%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 3 DAENVAVPEAAEERAEP-GQQQPAAEP---PPAEGLLRPAGPGA----------PEAAGT 48
++E V PEA + E G+ QP +E P AEG +P PE+ G
Sbjct: 1847 ESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGA 1906
Query: 49 EASSEEVGIAEAGPESE----VRTE----------PAAEAEAASGPSESPSPPAAEELPG 94
EA E EA PE+E + TE A EAE A+ +E + P +E +
Sbjct: 1907 EAPEAE---KEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIES 1963
Query: 95 SHAE---PPVPAQGEAPGEQARDERSDSRAQAVSED--AGGNEGRAAEAEPRALENGDAD 149
AE P EA + + ++ AQ SED A EG EAE A D
Sbjct: 1964 QEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGV 2023
Query: 150 EPSFSDPEDFVDDVSEEELLGDVLK---DRPQEADGIDS 185
E + P+ ++ E E G+ K D E+DG+++
Sbjct: 2024 E---AQPKSEGEEAQEVE--GETQKTEGDAQPESDGVEA 2057
Score = 52.4 bits (124), Expect = 2e-06
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 3 DAENVAVPEAAEERAEP--------GQQQPAAEP---PPAEGLLRPAGPG--APEAAGTE 49
+++ V PEA EE E G+ P +E AEG +P G APEA G
Sbjct: 2051 ESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEA 2110
Query: 50 ASSEEVGI----AEAGPESEVRTEPAAEAEA-------ASGPSESPSPPAAEELPGSHAE 98
+E + EA PESE P AE EA + +E + P +E + AE
Sbjct: 2111 QKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAE 2170
Query: 99 PPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPED 158
AQ E G +A + +++ ++ +A EG A+ E +E +A+E + +PE
Sbjct: 2171 E--EAQPELEGVEAPEAEGEAQPESEGIEAPEAEGE-AQPELEGVEAPEAEEEAQPEPEG 2227
Query: 159 FVDDVSEEE 167
+E E
Sbjct: 2228 VETPEAEGE 2236
Score = 49.3 bits (116), Expect = 1e-05
Identities = 51/159 (32%), Positives = 63/159 (39%), Gaps = 30/159 (18%)
Query: 2 QDAENVAVPEA-------AEERAEPGQQQPAAEPPPAEGLLRPAGPG--APEAAGTEASS 52
QDAE A PE+ AEE A+P + E P AEG +P G APEA G
Sbjct: 2151 QDAEGEAQPESEGIEAQEAEEEAQP--ELEGVEAPEAEGEAQPESEGIEAPEAEG----- 2203
Query: 53 EEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQA 112
EA PE E P AE EA P P E P + E ++GE GE+
Sbjct: 2204 ------EAQPELEGVEAPEAEEEA------QPEPEGV-ETPEAEGEAQPESEGETQGEK- 2249
Query: 113 RDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEP 151
+ S SE+A + E P + D P
Sbjct: 2250 KGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGGDTP 2288
Score = 48.5 bits (114), Expect = 2e-05
Identities = 52/179 (29%), Positives = 64/179 (35%), Gaps = 32/179 (17%)
Query: 1 MQDAENVAVPEAAEERAEP------------------GQQQPAA----------EPPPAE 32
MQ+AE A PE+ A+P G QP + E AE
Sbjct: 2009 MQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAE 2068
Query: 33 GLLRPA-GPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEE 91
G ++ A G PE+ +A E EA PESE P AE EA E
Sbjct: 2069 GEVQEAEGEAHPESEDVDAQEAE---GEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEA 2125
Query: 92 LPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADE 150
P S A+GEA E E D+ +A E G A E LE +A E
Sbjct: 2126 QPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPE 2184
Score = 47.0 bits (110), Expect = 7e-05
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 3 DAENVAVPE--AAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAG-TEASSEEVGIAE 59
+AE A PE + E G+ +P +E A+ A A EA G T+ SE + E
Sbjct: 1910 EAEKEAQPETESVEALETEGEDEPESEGAEAQ----EAEEAAQEAEGQTQPESEVIESQE 1965
Query: 60 AGPESEVRTE--PAAEAEAASGPSESPSPPAAEELPGSHAEPPV-----PAQGEAPGEQA 112
A E++ +E A E E + +E + P +E++ AE + AQ E+ G +A
Sbjct: 1966 AEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEA 2025
Query: 113 RDERSDSRAQAVSEDAGGNEG---------RAAEAEPRALENGDADEPSFSDPEDFVDDV 163
+ + AQ V + EG A EAE A E + + + +DV
Sbjct: 2026 QPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDV 2085
Query: 164 SEEELLGDVLKDRPQEADGIDS 185
+E G+ E++G+++
Sbjct: 2086 DAQEAEGEA----QPESEGVEA 2103
Score = 46.2 bits (108), Expect = 1e-04
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 43/224 (19%)
Query: 2 QDAENVAVPEA---------AEERAEPGQQQPAAEP---PPAEGLLRPAGPGA-PEAAGT 48
Q+AE A PE+ E + G+ QP +E P AEG ++ A A PE+ G
Sbjct: 1964 QEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGV 2023
Query: 49 EASSEEVG-------------IAEAGPESEVRTEPAAEAEAASG-----PSESPSPPAAE 90
EA + G +A PES+ P AE EA +E + P +E
Sbjct: 2024 EAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESE 2083
Query: 91 ELPGSHAEPPVPAQG------EAPGEQARDE-----RSDSRAQAVSEDAGGNEGRA-AEA 138
++ AE + EA GE + E ++ AQ SE E A+
Sbjct: 2084 DVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQP 2143
Query: 139 EPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEADG 182
E +E DA+ + + E +EEE ++ EA+G
Sbjct: 2144 ESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEG 2187
Score = 39.7 bits (91), Expect = 0.011
Identities = 49/157 (31%), Positives = 61/157 (38%), Gaps = 22/157 (14%)
Query: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAG---PGAPEAA-GTEASSEEVGIAEAGPESEV 66
E ER E G Q E +G G PG + A G EA E EA PESE
Sbjct: 1795 EGISERGETGGQGSGHEDN-LQGEAAAGGDQDPGQSDGAEGIEAPEAE---GEAQPESEG 1850
Query: 67 RTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE 126
P AE +A +E + P +E++ AE GEA E E ++ + E
Sbjct: 1851 VEAPEAEGDAQE--AEGEAQPESEDVEAPEAE------GEAQPESEDVETPEAEWEVQPE 1902
Query: 127 DAGGNEGRA-AEAEP-----RALENGDADEPSFSDPE 157
G A EA+P ALE DEP E
Sbjct: 1903 SEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAE 1939
Score = 32.0 bits (71), Expect = 2.4
Identities = 37/153 (24%), Positives = 53/153 (34%), Gaps = 21/153 (13%)
Query: 18 EPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGI-AEAGPESEVRTEPAAEAEA 76
+ G +QP P P A + AG+ SEE + + GP+ + E A+
Sbjct: 889 QEGTRQPGPTPSPGPNSGASRRSSASQGAGSRGLSEEKTLRSGGGPQGQ---EEASGVSP 945
Query: 77 ASGPSESPSPPAAEELPGSHAEPPVPAQGEA-----------------PGEQARDERSDS 119
+S P SP E L EP + A PG+ E
Sbjct: 946 SSLPRSSPEAVVREWLDNIPEEPILMTYELADETTGAAGGGLRGPEVDPGDDHSLEGLGE 1005
Query: 120 RAQAVSEDAGGNEGRAAEAEPRALENGDADEPS 152
AQA + G+ G+ E E L + D S
Sbjct: 1006 PAQAGQQSLEGDPGQDPEPEGALLGSSDTGPQS 1038
Score = 30.4 bits (67), Expect = 6.9
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 27/157 (17%)
Query: 23 QPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSE 82
Q +A P + GL P G PE++ + E+ G+ A P +++ AE +A E
Sbjct: 450 QDSASPASSTGL--PEG-SEPESSCCPRTPED-GVDSASPSAQI----GAERKAGGSLGE 501
Query: 83 SPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER---SDSRAQAVSEDAGGNEG------ 133
P L A P QG +AR E SDS A S + G
Sbjct: 502 DPG------LCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 134 ----RAAEAEPRALENGDADEPSFSDPEDFVDDVSEE 166
RA ++ A E GD P+ S DD+ E
Sbjct: 556 PGKARAETSQQEASEGGDPASPALSLSSLRSDDLQAE 592
Score = 30.4 bits (67), Expect = 6.9
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 15 ERAEPGQQQPAAEPPPAEGLLRPAGPGA------PEAAGTEASSEEVGIAEAGPESEVRT 68
+ E G+ +AEP PAEG P P + P A+ ++ S+ E P + +
Sbjct: 1428 QEEEAGRASASAEPCPAEGTEEPTEPPSHLSETDPSASERQSGSQLEPGLEKPPGATMMG 1487
Query: 69 EPAAEAEAASGPSESPSPPA 88
+ +A+ G +E S A
Sbjct: 1488 QEHTQAQPTQGAAERSSSVA 1507
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 52.4 bits (124), Expect = 2e-06
Identities = 55/192 (28%), Positives = 65/192 (33%), Gaps = 40/192 (20%)
Query: 8 AVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGA------------------------- 42
A P A RA PG P P P G +PAGPGA
Sbjct: 161 AGPAALAARAGPGPG-PGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVN 219
Query: 43 -----------PEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEE 91
P A GT + A A P + PAA A AA + P PPA
Sbjct: 220 NGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPAT 279
Query: 92 L---PGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDA 148
L PG A PP A P A++ S A A + AGG G + + P A A
Sbjct: 280 LARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPA 339
Query: 149 DEPSFSDPEDFV 160
P+ V
Sbjct: 340 PGVKAESPKRVV 351
Score = 42.0 bits (97), Expect = 0.002
Identities = 41/148 (27%), Positives = 52/148 (35%), Gaps = 16/148 (10%)
Query: 17 AEPGQQQPAAEP-PPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPA---- 71
A P + P A P PP G RP G G V A P +++R P
Sbjct: 76 AAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAG 135
Query: 72 ------AEAEAASGPSESPSPPAAEELPGSHAEP----PVPAQGEAPGEQARDERSDSRA 121
A A A+GP +P+ PA P + A P P G PG A
Sbjct: 136 SCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAA 195
Query: 122 QAVSEDAG-GNEGRAAEAEPRALENGDA 148
Q ++ A N AA + NG A
Sbjct: 196 QTLNGSAALLNSHHAAAPAVSLVNNGPA 223
Score = 41.6 bits (96), Expect = 0.003
Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 4 AENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPE 63
A V P AA+ G A P PA PAG G A++ G+ P+
Sbjct: 294 APAVPPPAAAQNGGSAG-----AAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPK 348
Query: 64 SEVR-TEPAAEAEAASGPSESPS-----PPAAEELPGSHAEPPVPAQGEAPG 109
V+ PAA+ AASGP+ + + P LP A PP PA G G
Sbjct: 349 RVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPP-PAPGTPTG 399
Score = 34.3 bits (77), Expect = 0.48
Identities = 38/110 (34%), Positives = 42/110 (38%), Gaps = 20/110 (18%)
Query: 10 PEAAEE-----RAEPGQQQPAAEPPPAEGL-LRPAGPGAPEA---------AGTEASSEE 54
P AA E RA PG P PP+ L PAGP P A AG+ A
Sbjct: 83 PGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPA 142
Query: 55 VGIAEAGPESEVR--TEPAAEAEAAS--GPSESPSP-PAAEELPGSHAEP 99
AGPE +PA A A+ GP P P P PG A P
Sbjct: 143 AAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGP 192
Score = 33.5 bits (75), Expect = 0.81
Identities = 36/123 (29%), Positives = 41/123 (33%), Gaps = 20/123 (16%)
Query: 40 PGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPG----- 94
P PE A + + P PAA AE A G + P PPA PG
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEP-PPAGRARPGGGGPQ 103
Query: 95 -----SHAEPPVPAQGEAPGEQARDERSDSRAQ-----AVSEDAGGNE----GRAAEAEP 140
S P VPA P + R S A + A G E G A A P
Sbjct: 104 RPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGP 163
Query: 141 RAL 143
AL
Sbjct: 164 AAL 166
Score = 30.0 bits (66), Expect = 9.0
Identities = 28/118 (23%), Positives = 37/118 (31%), Gaps = 3/118 (2%)
Query: 7 VAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEV 66
+ P A P P+ PP A PA P + G P +
Sbjct: 238 IQTPPFVGAAAPPAPAAPS--PPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP 295
Query: 67 RTEPAAEAEAASGPSESPSP-PAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQA 123
P A A+ +P+P PAA G +P A AP + E QA
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA 353
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 50.4 bits (119), Expect = 6e-06
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQ-GEAPGEQARDERSDS 119
G + E ++ +A+SGP SP P E P E +Q G A EQA + +
Sbjct: 15 GGDGESLAARPSKIKASSGPPTSPEPGELESEPEEEEEEQAASQGGTAADEQAEAPKGLT 74
Query: 120 RAQAVSEDAGGNEGRAAEAEPRALENGD--ADEPSFSD----PEDFVDDVSEEEL 168
A+A E+ G GR AE +P E + A+EP+ + PE+ + EEL
Sbjct: 75 AAEAAGEEGPGEPGRPAEPQPEPEEPAEVGAEEPAQPEPGAGPEELEAEAGAEEL 129
Score = 50.1 bits (118), Expect = 8e-06
Identities = 44/144 (30%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPE----SE 65
PE EE Q AA+ E P G A EAAG E E AE PE +E
Sbjct: 47 PEEEEEEQAASQGGTAAD----EQAEAPKGLTAAEAAGEEGPGEPGRPAEPQPEPEEPAE 102
Query: 66 VRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVS 125
V E A+ E +GP E + AEEL + V Q P + +E + + +A +
Sbjct: 103 VGAEEPAQPEPGAGPEELEAEAGAEELEQAAEGKEVRFQASLPLTRIDEEEAAAAPEAET 162
Query: 126 EDAGGNEGRAAEAEPRALENGDAD 149
E G E E + E+ + D
Sbjct: 163 ERVEGEEEDKEETQRDGAESKERD 186
Score = 41.2 bits (95), Expect = 0.004
Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 21/173 (12%)
Query: 4 AENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGP---GAPEAAGTEASSEEVGIAEA 60
A A E E P + QP E P G PA P PE EA +EE + +A
Sbjct: 75 AAEAAGEEGPGEPGRPAEPQPEPEEPAEVGAEEPAQPEPGAGPEELEAEAGAEE--LEQA 132
Query: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR 120
EVR + + + +P A E +GE E+ ++E
Sbjct: 133 AEGKEVRFQASLPLTRIDEEEAAAAPEAETE----------RVEGE---EEDKEETQRDG 179
Query: 121 AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVL 173
A++ D G ++ E R + ++ +S+ V + E++L D+L
Sbjct: 180 AESKERDGEGRPAKSQEEGKRLYGRDEFEDLEWSEE---VQKLQEQQLRSDLL 229
Score = 34.3 bits (77), Expect = 0.48
Identities = 45/210 (21%), Positives = 75/210 (35%), Gaps = 19/210 (9%)
Query: 12 AAEERAEPGQQ-----QPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEV 66
++E +PG + AA P + P P +PE E+ EE +A +
Sbjct: 4 SSEHTKDPGGEGGDGESLAARPSKIKASSGP--PTSPEPGELESEPEEEEEEQAASQGGT 61
Query: 67 RTEPAAEAE-----AASGPSESPSPPAAEELPGSHAEPPVPAQGE-----APGEQARDER 116
+ AEA A + E P P P E P E PG +
Sbjct: 62 AADEQAEAPKGLTAAEAAGEEGPGEPGRPAEPQPEPEEPAEVGAEEPAQPEPGAGPEELE 121
Query: 117 SDSRAQAVSEDAGGNEGRAAEAEP--RALENGDADEPSFSDPEDFVDDVSEEELLGDVLK 174
+++ A+ + + A G E R + P R E A P ++ +EE D +
Sbjct: 122 AEAGAEELEQAAEGKEVRFQASLPLTRIDEEEAAAAPEAETERVEGEEEDKEETQRDGAE 181
Query: 175 DRPQEADGIDSVIVVDNVPQVGPDRLEKLK 204
+ ++ +G + + G D E L+
Sbjct: 182 SKERDGEGRPAKSQEEGKRLYGRDEFEDLE 211
>gi|193083172 nuclear assembly factor 1 homolog isoform b [Homo
sapiens]
Length = 389
Score = 50.1 bits (118), Expect = 8e-06
Identities = 51/235 (21%), Positives = 88/235 (37%), Gaps = 40/235 (17%)
Query: 19 PGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAAS 78
P P + P P + G+P+A T E P E +P A AA
Sbjct: 27 PAAPSPGSAPVPGTQPPLQSFEGSPDAGQT---------VEVKPAGEQPLQPVLNAVAAG 77
Query: 79 GPSESPSPPAAEELPGSHAEPPVPAQ-GEAPGE-QARDERSDSRAQAVSEDAGGNEGRAA 136
P+ P PPA G P A+ AP + D SDS ++ S+ + + ++
Sbjct: 78 TPAPQPQPPAESPACGDCVTSPGAAEPARAPDSLETSDSDSDSDSETDSDSSSSSSSSSS 137
Query: 137 EAE---------PRALENGDADEPSFSDPEDFVDDVSEEELLGDV--------------- 172
+ P L +GD D + ++F +E LL ++
Sbjct: 138 SSSSSSSSCISLPPVLSDGDDDLQIEKENKNFPLKTKDELLLNELPSVEELTIILPEDIE 197
Query: 173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKL-----KNVIHKIFSKFGKITNDFY 222
LK + I+ +++++++ + P E + + KIF FG + + FY
Sbjct: 198 LKPLGMVSSIIEQLVIIESMTNLPPVNEETVIFKSDRQAAGKIFEIFGPVAHPFY 252
>gi|193083157 nuclear assembly factor 1 homolog isoform a [Homo
sapiens]
Length = 494
Score = 50.1 bits (118), Expect = 8e-06
Identities = 51/235 (21%), Positives = 88/235 (37%), Gaps = 40/235 (17%)
Query: 19 PGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAAS 78
P P + P P + G+P+A T E P E +P A AA
Sbjct: 27 PAAPSPGSAPVPGTQPPLQSFEGSPDAGQT---------VEVKPAGEQPLQPVLNAVAAG 77
Query: 79 GPSESPSPPAAEELPGSHAEPPVPAQ-GEAPGE-QARDERSDSRAQAVSEDAGGNEGRAA 136
P+ P PPA G P A+ AP + D SDS ++ S+ + + ++
Sbjct: 78 TPAPQPQPPAESPACGDCVTSPGAAEPARAPDSLETSDSDSDSDSETDSDSSSSSSSSSS 137
Query: 137 EAE---------PRALENGDADEPSFSDPEDFVDDVSEEELLGDV--------------- 172
+ P L +GD D + ++F +E LL ++
Sbjct: 138 SSSSSSSSCISLPPVLSDGDDDLQIEKENKNFPLKTKDELLLNELPSVEELTIILPEDIE 197
Query: 173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKL-----KNVIHKIFSKFGKITNDFY 222
LK + I+ +++++++ + P E + + KIF FG + + FY
Sbjct: 198 LKPLGMVSSIIEQLVIIESMTNLPPVNEETVIFKSDRQAAGKIFEIFGPVAHPFY 252
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 49.3 bits (116), Expect = 1e-05
Identities = 45/164 (27%), Positives = 58/164 (35%), Gaps = 17/164 (10%)
Query: 7 VAVPEAAEERAEPGQQQPAAE-----PPPAEGLLRPAGP-------GAPEAAGTEASSEE 54
V P R E GQ P+ E PP EG+ P GP G P A+G + +
Sbjct: 2403 VGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGD 2462
Query: 55 VGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARD 114
G+ GP E R EP E G P PGS E +G+ +
Sbjct: 2463 PGVGLPGPRGE-RGEPGIRGE--DGRPGQEGPRGLTGPPGSRGER--GEKGDVGSAGLKG 2517
Query: 115 ERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPED 158
++ DS G +G E PR L+ DP D
Sbjct: 2518 DKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGD 2561
Score = 48.5 bits (114), Expect = 2e-05
Identities = 44/146 (30%), Positives = 50/146 (34%), Gaps = 15/146 (10%)
Query: 13 AEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGI----AEAGPESEVRT 68
A +PG Q P P P G P PGAP AG G+ E GP T
Sbjct: 2161 AGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLT 2220
Query: 69 EPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQ-GEA--PGEQARDERSDSRAQAVS 125
P +G P PP L G P +P Q GE PG RD S S
Sbjct: 2221 GP-------TGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGS 2273
Query: 126 EDAGGNEGRAAEAEPRALENGDADEP 151
G+ G P+ E G P
Sbjct: 2274 PGVPGSPGLPGPVGPKG-EPGPTGAP 2298
Score = 38.5 bits (88), Expect = 0.025
Identities = 34/124 (27%), Positives = 47/124 (37%), Gaps = 15/124 (12%)
Query: 16 RAEPGQQQPAAE-----PPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
+ +PG + PA E PP +G R G P AAG + G +AG
Sbjct: 1757 QGDPGVRGPAGEKGDRGPPGLDG--RSGLDGKPGAAGPSGPNGAAG--KAGDPGRDGLPG 1812
Query: 71 AAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGG 130
+ GPS PP PG +P + + PG+ D R + + A G
Sbjct: 1813 LRGEQGLPGPS---GPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS---GASG 1866
Query: 131 NEGR 134
EGR
Sbjct: 1867 REGR 1870
Score = 36.6 bits (83), Expect = 0.096
Identities = 37/132 (28%), Positives = 46/132 (34%), Gaps = 20/132 (15%)
Query: 19 PGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVG-IAEAGPESE--VRTEPAAEA- 74
PG P P L P PGAP G + G + + GP E + P E
Sbjct: 2376 PGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGI 2435
Query: 75 ---EAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGN 131
GP S PP A L G +P V G R ER + + G
Sbjct: 2436 PGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPG------PRGERGEPGIR-------GE 2482
Query: 132 EGRAAEAEPRAL 143
+GR + PR L
Sbjct: 2483 DGRPGQEGPRGL 2494
Score = 36.2 bits (82), Expect = 0.13
Identities = 44/165 (26%), Positives = 53/165 (32%), Gaps = 21/165 (12%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTE 69
P + +PG P+ P P L P G P GT ++ E GP
Sbjct: 1361 PGLPGRKGDPG---PSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGG 1417
Query: 70 PAAEAEAASGPSESPSPPAAEELPGSHAE--------PPVPAQGEAPGEQ-------ARD 114
A G SP P PG E P +P Q +PGEQ A
Sbjct: 1418 IAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIG 1477
Query: 115 ERSDSRAQAVSEDAG--GNEGRAAEAEPRALENGDADEPSFSDPE 157
+ D +AG G G A R L G A P PE
Sbjct: 1478 PKGDRGFPGPLGEAGEKGERGPPGPAGSRGLP-GVAGRPGAKGPE 1521
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/121 (25%), Positives = 41/121 (33%), Gaps = 8/121 (6%)
Query: 21 QQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVG-IAEAGPESEVRTEPAAEAEAASG 79
Q QP A P + P PG G +VG + G + E + A + G
Sbjct: 2586 QGQPGAAGIPGD----PGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKG 2641
Query: 80 PSESPSPPAAEELPGSHAE---PPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAA 136
PP L G E P VP Q APG++ R G++G
Sbjct: 2642 DKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKG 2701
Query: 137 E 137
E
Sbjct: 2702 E 2702
Score = 34.7 bits (78), Expect = 0.37
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 5/93 (5%)
Query: 23 QPAAEPPPAEGLLRPAG----PGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAE-AEAA 77
+P PP GL P G PG P +G G+ E+ P + A
Sbjct: 2208 EPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGK 2267
Query: 78 SGPSESPSPPAAEELPGSHAEPPVPAQGEAPGE 110
G SP P + LPG P APG+
Sbjct: 2268 DGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQ 2300
Score = 32.7 bits (73), Expect = 1.4
Identities = 35/144 (24%), Positives = 48/144 (33%), Gaps = 14/144 (9%)
Query: 9 VPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVG----IAEAGPES 64
+P + E G + P EP ++ GPG P G S G + + GP
Sbjct: 1330 LPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRG 1389
Query: 65 EVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQA-------RDERS 117
P + G PP E + EP +P +PG Q + E+
Sbjct: 1390 PPGL-PGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKG 1448
Query: 118 DSRAQAVSEDAGGNEGRAAEAEPR 141
DS A G G E PR
Sbjct: 1449 DSEDGA--PGLPGQPGSPGEQGPR 1470
Score = 31.6 bits (70), Expect = 3.1
Identities = 37/153 (24%), Positives = 50/153 (32%), Gaps = 22/153 (14%)
Query: 15 ERAEPGQQQPAAEPPPA-------EGLLRPAGP-GAPEAAGTEASSEEVGIAEAGPESEV 66
E+ EPG+ A PA +G + PAGP GA G V + GP+ +
Sbjct: 1532 EKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDP 1591
Query: 67 RTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE 126
+GP PP G +P P G + RD +
Sbjct: 1592 GDRGPIGLTGRAGPPGDSGPP------GEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPP 1645
Query: 127 DAGGNEGRAAEAEPRAL--------ENGDADEP 151
G G+A E R E GD +P
Sbjct: 1646 GDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDP 1678
Score = 30.0 bits (66), Expect = 9.0
Identities = 29/102 (28%), Positives = 35/102 (34%), Gaps = 8/102 (7%)
Query: 3 DAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGP-GAPEAAGTEASSEEVGIAEAG 61
D+E+ A P + PG+Q P P G + P G G P G E G G
Sbjct: 1449 DSEDGA-PGLPGQPGSPGEQGPRGPP----GAIGPKGDRGFPGPLGEAGEKGERG--PPG 1501
Query: 62 PESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPA 103
P A A GP P P + G P PA
Sbjct: 1502 PAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPA 1543
Score = 30.0 bits (66), Expect = 9.0
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 10 PEAAEERAEPGQQ-QPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRT 68
P ER E G++ + + PP GL P PG P G + S +E G +G +
Sbjct: 2057 PGERGERGEKGERGEQGRDGPP--GL--PGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGL 2112
Query: 69 EPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPG 109
+ A ++G + G EP Q PG
Sbjct: 2113 KGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPG 2153
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 48.1 bits (113), Expect = 3e-05
Identities = 42/145 (28%), Positives = 50/145 (34%), Gaps = 11/145 (7%)
Query: 7 VAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGP----GAPEAAGTEASSEEVGIAEAGP 62
V +P ER PG PA P G + P G G P G S+ VG E GP
Sbjct: 995 VGMPGQRGERGMPGLPGPAGTP----GKVGPTGATGDKGPPGPVGPPGSNGPVG--EPGP 1048
Query: 63 ESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQ 122
E + + A G P LPGS P P APG+ + SR
Sbjct: 1049 EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGP 1108
Query: 123 AVSEDAGGNEGRAAEAEPRALENGD 147
G G PR + GD
Sbjct: 1109 IGPPGRAGKRGLPGPQGPRG-DKGD 1132
Score = 35.8 bits (81), Expect = 0.16
Identities = 42/159 (26%), Positives = 52/159 (32%), Gaps = 15/159 (9%)
Query: 19 PGQQQPAAEP--PPAEGLLRPAGP-GAPEAAGTEASSEEVGIA-EAGPESE--VRTEPAA 72
PG P E P GL+ P G G P + G + VG A GP+ + V+ EP
Sbjct: 806 PGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865
Query: 73 EAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNE 132
+ G + SP P PG H VP G Q + A G
Sbjct: 866 PGQ--KGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPA 923
Query: 133 GRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGD 171
G A G EP P D +GD
Sbjct: 924 GAPGPA-------GPLGEPGKEGPPGLRGDPGSHGRVGD 955
Score = 35.4 bits (80), Expect = 0.21
Identities = 38/122 (31%), Positives = 43/122 (35%), Gaps = 20/122 (16%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGP----GAPEAAGTEASSEEVGIAEAGPESE 65
P E EPGQ+ A P P +GL GP G P G + G A P S
Sbjct: 857 PGVKGEPGEPGQKGDAGSPGP-QGLAGSPGPHGPNGVPGLKGGRGTQGPPG-ATGFPGSA 914
Query: 66 VRTEP--AAEAEAASGPSESP---SPPAAEELPGSHAE---------PPVPAQGEAPGEQ 111
R P A A +GP P PP PGSH P P PGE
Sbjct: 915 GRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGED 974
Query: 112 AR 113
+
Sbjct: 975 GQ 976
Score = 33.9 bits (76), Expect = 0.62
Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 29 PPAEGLLRPAG----PGAPEAAGTEASSEEVGI----AEAGPESEVRTEPAAEAEAASGP 80
P + GL P G PG P AG + G E GP V A GP
Sbjct: 611 PGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGP 670
Query: 81 SESPSPPAAEELPGSHAEPPVPAQGEAPGEQ 111
P P + LPG P P +G PG+Q
Sbjct: 671 ---PGPTGFQGLPGP---PGPPGEGGKPGDQ 695
Score = 33.5 bits (75), Expect = 0.81
Identities = 36/148 (24%), Positives = 45/148 (30%), Gaps = 13/148 (8%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVG-IAEAGPESEVRT 68
P +A PG PA P PA L P G P G S VG AGP
Sbjct: 911 PGSAGRVGPPG---PAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGD 967
Query: 69 EPAAEAEAASGPSESPSPPAAE------ELPGSHAE---PPVPAQGEAPGEQARDERSDS 119
+ + GP P P +PG E P +P PG+ +
Sbjct: 968 KGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGD 1027
Query: 120 RAQAVSEDAGGNEGRAAEAEPRALENGD 147
+ G+ G E P D
Sbjct: 1028 KGPPGPVGPPGSNGPVGEPGPEGPAGND 1055
Score = 31.2 bits (69), Expect = 4.0
Identities = 32/126 (25%), Positives = 43/126 (34%), Gaps = 9/126 (7%)
Query: 28 PPPAEGLLRPAGPGAPEAAGTEA-SSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSP 86
PP +G+ PG AGT + GI E G E + A GP P
Sbjct: 757 PPGLQGM-----PGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGP 811
Query: 87 PAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAE-AEPRALEN 145
+ PG P PG + + + + A + G G E EP +
Sbjct: 812 TGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPG--QK 869
Query: 146 GDADEP 151
GDA P
Sbjct: 870 GDAGSP 875
Score = 30.0 bits (66), Expect = 9.0
Identities = 29/123 (23%), Positives = 38/123 (30%), Gaps = 7/123 (5%)
Query: 18 EPGQQQPAAEP--PPAEGLLRP-----AGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
+PG P P P +GL RP AG G++ + GP +
Sbjct: 169 QPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQG 228
Query: 71 AAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGG 130
+GP P P GS P + GE R+ A S A G
Sbjct: 229 QQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARG 288
Query: 131 NEG 133
G
Sbjct: 289 FPG 291
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 48.1 bits (113), Expect = 3e-05
Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 42/241 (17%)
Query: 4 AENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGI------ 57
A+ V++ EA E P ++ AE A L A TEAS+EE
Sbjct: 564 AKGVSIEEAPLELQPPSGEETTAEEASAAIQL---------LAATEASAEEAPAEVQPPP 614
Query: 58 AEAGPESEVRTEPAAEAEAASGP---SESPS---PPAAEELPGSHAEPPVPAQGEAPGEQ 111
AE P +EV+ PA EA A P E+P+ PP AEE P PP EAP E
Sbjct: 615 AEEAP-AEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAE---EAPAEV 670
Query: 112 ARDERSDSRAQAVS---EDAGGNEGRAAEAEPRALENGDADEPS---FSDPEDFVDDVSE 165
++ A+ S E+ E AA P A ++ A+E S S P D + ++E
Sbjct: 671 QPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPA-DDVPAEEASVDKHSPPADLL--LTE 727
Query: 166 EELLGDV--------LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKI 217
E +G+ + P++ +++V PQV KL +V+ + +KF ++
Sbjct: 728 EFPIGEASAEVSPPPSEQTPEDEALVENVSTEFQSPQVAGIPAVKLGSVVLEGEAKFEEV 787
Query: 218 T 218
+
Sbjct: 788 S 788
Score = 42.0 bits (97), Expect = 0.002
Identities = 44/155 (28%), Positives = 60/155 (38%), Gaps = 18/155 (11%)
Query: 13 AEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSE-EVGIAEAGPESEVRTE-- 69
AEE + Q A EPP E P + E + EA +E + +AE E E
Sbjct: 467 AEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQ 526
Query: 70 --PAAEAEAASGPSESPSP----PAAEELPGSHAEPPVPAQG--EAP-------GEQARD 114
A EA A P+E+ SP +AEE P P EAP GE+
Sbjct: 527 LLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTA 586
Query: 115 ERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDAD 149
E + + Q ++ E AE +P E A+
Sbjct: 587 EEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAE 621
Score = 40.4 bits (93), Expect = 0.007
Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 18/198 (9%)
Query: 1 MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSE-EVGIAE 59
+ D + + EA E A Q A E P E P E EAS+E ++ A
Sbjct: 421 LADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAAT 480
Query: 60 AGPESEVRTE---PAAEAEAASGPSESPSPPAAEELPGSHAEPPV-------------PA 103
P E E P +E +A P AEE A + PA
Sbjct: 481 EPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPA 540
Query: 104 QGEAP-GEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDD 162
+ ++P E+ E + + Q+ S E E +P + E A+E S + +
Sbjct: 541 EAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATE 600
Query: 163 VSEEELLGDVLKDRPQEA 180
S EE +V +EA
Sbjct: 601 ASAEEAPAEVQPPPAEEA 618
Score = 39.3 bits (90), Expect = 0.015
Identities = 56/198 (28%), Positives = 75/198 (37%), Gaps = 23/198 (11%)
Query: 5 ENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEA-------------- 50
E V VP E A EPP E P E A +A
Sbjct: 236 EEVTVPVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQP 295
Query: 51 SSEEVGIAEAG---PESEVRTE--PAAEAEAASGPSESPSPPAAEELPGSH--AEPPVPA 103
S+EE AEA E+ V+ + PA EA P+E PP+AEE P AE P+
Sbjct: 296 STEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEI-QPPSAEESPSVELLAEILPPS 354
Query: 104 QGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDAD-EPSFSDPEDFVDD 162
E+P E+ E A+ E R+ A+ +E E + + V+
Sbjct: 355 AEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEP 414
Query: 163 VSEEELLGDVLKDRPQEA 180
+ EE L DV P+EA
Sbjct: 415 PTVEETLADVQPLLPEEA 432
Score = 35.0 bits (79), Expect = 0.28
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 20/187 (10%)
Query: 4 AENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPE 63
AE E E P ++ +E PPAE L P A ++ E E +
Sbjct: 338 AEESPSVELLAEILPPSAEESPSEEPPAEIL----PPPAEKSPSVELLGEIRSPSAQKAP 393
Query: 64 SEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQA 123
EV+ P AE P++ P E L + +P +P EAP E+AR+ + + +
Sbjct: 394 IEVQPLP-AEGALEEAPAKVEPPTVEETL--ADVQPLLPE--EAPREEARELQLSTAMET 448
Query: 124 VSEDAGGN-----------EGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDV 172
+E+A E +AE + A ADE ++ S EE +V
Sbjct: 449 PAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHAEV 508
Query: 173 LKDRPQE 179
+E
Sbjct: 509 QSPLAEE 515
Score = 33.1 bits (74), Expect = 1.1
Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Query: 2 QDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAG 61
++A P AEE Q PA E P E L P A + EAS ++ +
Sbjct: 664 EEAPAEVQPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDK----HSP 719
Query: 62 PESEVRTE--PAAEAEAASGPSESPSPPAAEEL 92
P + TE P EA A P S P E L
Sbjct: 720 PADLLLTEEFPIGEASAEVSPPPSEQTPEDEAL 752
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 47.8 bits (112), Expect = 4e-05
Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 8/150 (5%)
Query: 3 DAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGP 62
D ++ A PE + P A + PA P P++ A A P
Sbjct: 401 DPDSGATPEDPDSGTAPADPDSGAFAADPDSGAAPAAPADPDSGAAPD-------APADP 453
Query: 63 ESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQ 122
+S + A+ +A + P E+P+ PAA E +H P P G A R+ +
Sbjct: 454 DSGAAPDAPADPDAGAAP-EAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATRAAQVRR 512
Query: 123 AVSEDAGGNEGRAAEAEPRALENGDADEPS 152
A S R P + E AD P+
Sbjct: 513 AASAAPASGARRKIHLRPPSPEIQAADPPT 542
Score = 37.7 bits (86), Expect = 0.043
Identities = 42/137 (30%), Positives = 53/137 (38%), Gaps = 27/137 (19%)
Query: 24 PAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAE----AGPESEVRTEPAAEAEAASG 79
PAA PP L P G+P S G + +GP E+ + PA +
Sbjct: 268 PAANAPP---LWVPGAIGSPSQEAVRPPSNFTGSSPWMEISGPPFEIGSAPAGVDDT--- 321
Query: 80 PSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAE 139
P SPP A L G PP+ G AP ++ R ER V E+A EG A
Sbjct: 322 PVNMDSPPIA--LDG----PPIKVSG-APDKRERAERPP-----VEEEAAEMEGAA---- 365
Query: 140 PRALENGDADEPSFSDP 156
A E G P + P
Sbjct: 366 -DAAEGGKVPSPGYGSP 381
Score = 37.0 bits (84), Expect = 0.074
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 10 PEAAEERAEPGQQQPAAE----PPPAEGLLRPA-GPGAPEA--AGTEASSEEVGIAEAGP 62
P+ E P ++ AAE AEG P+ G G+P A A + ++ A A P
Sbjct: 343 PDKRERAERPPVEEEAAEMEGAADAAEGGKVPSPGYGSPAAGAASADTAARAAPAAPADP 402
Query: 63 ESEVRTEPAAEAEAASGPSESP--SPPAAEELPGSHAEPPVPAQGEAPGE----QARDER 116
+S E A + P + P + P + A+P A +AP + A D
Sbjct: 403 DSGATPEDPDSGTAPADPDSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAP 462
Query: 117 SDSRAQAVSE---DAGGNEGRAAEAEPRALENGDADEPSFS 154
+D A A E E RAA P A + G P+ S
Sbjct: 463 ADPDAGAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAAS 503
Score = 35.0 bits (79), Expect = 0.28
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 58 AEAGPESEVRTEPAAEAEAASGPSESPSP-------------PAAEELPGSHAEPPVPAQ 104
AE P E E A+AA G + PSP AA P + A+P A
Sbjct: 349 AERPPVEEEAAEMEGAADAAEG-GKVPSPGYGSPAAGAASADTAARAAPAAPADPDSGAT 407
Query: 105 GEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPE 157
E P DS A A D+G A+ + A + AD S + P+
Sbjct: 408 PEDPDSGTAPADPDSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPD 460
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 59 EAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEP-PVPAQGEAPG 109
E G + E +P EA A+ P PSP E H EP PV GEA G
Sbjct: 21 EIGEQPE---QPPLEAPGAAAPGAGPSPAEEMETEPPHNEPIPVENDGEACG 69
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 47.8 bits (112), Expect = 4e-05
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 17 AEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPE---SEVRTEPAAE 73
AE + +PAA P PA + +P PGAP AG E VG E GP+ + V T PA +
Sbjct: 86 AERARGRPAA-PAPAALVAQPGAPGAPADAGPEP----VGTQEPGPDPIAAAVETAPAPD 140
Query: 74 AEAASGPSESPSPPAAEELPGSHAEPPVPAQGEA-PGEQARDERSDSRAQAVSED 127
GP E + +E G+ P P + E+ D+ D +A A S D
Sbjct: 141 ----GGPREEAAATVRKEDEGAAEAKPEPGRTRRDEPEEEEDDEDDLKAVATSLD 191
Score = 38.1 bits (87), Expect = 0.033
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 24/96 (25%)
Query: 28 PPPAEGLLRPAG-PGAPEAAGTEASSEE----------------VGIAEAGPESEVRTEP 70
P PA G AG PG P+ +E + + VG+A P E
Sbjct: 1407 PEPASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAPE----- 1461
Query: 71 AAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGE 106
AA AS P E PPA E P H+ P PA G+
Sbjct: 1462 AASTRDASAPREPLPPPAPE--PSPHSGTPQPALGQ 1495
Score = 32.7 bits (73), Expect = 1.4
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 6/121 (4%)
Query: 19 PGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAAS 78
P + PA E P + L P PEA+ A ++ ++ P + ++A
Sbjct: 1317 PVAEHPAPEAPESSPPL-PLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQA---- 1371
Query: 79 GPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEA 138
GPS P P A P S +P G AP E + A G +G +E
Sbjct: 1372 GPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAG-GPGTPQGLTSEL 1430
Query: 139 E 139
E
Sbjct: 1431 E 1431
Score = 30.8 bits (68), Expect = 5.3
Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 19/135 (14%)
Query: 10 PEAAEERAEPGQQQPAAEPPP---AEGLLRPAG----PGAPEAAGTEASSEEVGIAE--A 60
PEA+++ A Q + E P ++ LL AG PGAP A +S + + A
Sbjct: 1340 PEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGA 1399
Query: 61 GPESEVRTEPAAEAEAASGPSESP---------SPPAAEELPGSHAEPPVPAQGEAPGEQ 111
P + EPA+ + +G +P S P AE A P+ G AP
Sbjct: 1400 APATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPL-VVGLAPCTP 1458
Query: 112 ARDERSDSRAQAVSE 126
A + S A A E
Sbjct: 1459 APEAASTRDASAPRE 1473
Score = 30.4 bits (67), Expect = 6.9
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 25/100 (25%)
Query: 10 PEAAEERAEPGQQQP----AAEPPPAEGLLRPA----GPGAPEAAGTEASSEEVGIAEAG 61
PEAA R ++P A EP P G +PA P P A G V +A
Sbjct: 1460 PEAASTRDASAPREPLPPPAPEPSPHSGTPQPALGQPAPLLPAAVGA------VSLAT-- 1511
Query: 62 PESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPV 101
S++ + P GP+ P PP+A E G P V
Sbjct: 1512 --SQLPSPPL-------GPTVPPQPPSALESDGEGPPPRV 1542
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 47.4 bits (111), Expect = 5e-05
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 2 QDAENVAVPEAAEERAEPGQQQPAAEPPPAEGL----LRPAGPGAPEAAGTEASSEEVGI 57
Q ++ A EAA ER PG+ A+ P A G ++ G +P AA + A EE+
Sbjct: 4 QFSKTAAKGEAAAER--PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAK-EELQA 60
Query: 58 AEAGPESEVRTEPAAEAEAASGPSES----PSPPAAEELPGSHAEPPVPAQGEA--PGEQ 111
+ P ++ + EPAA A+ PS + P+ AA E S E PA+GEA PG
Sbjct: 61 NGSAPAAD-KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSP 119
Query: 112 ARDERSDSRAQAVSEDAGGNEG 133
E + A + + +G
Sbjct: 120 TAAEGEAASAASSTSSPKAEDG 141
Score = 41.6 bits (96), Expect = 0.003
Identities = 53/202 (26%), Positives = 72/202 (35%), Gaps = 33/202 (16%)
Query: 8 AVPEAAE----------------ERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEAS 51
A P AAE ++ EP A P A PA APEA +
Sbjct: 45 ASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVE 104
Query: 52 SEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAE-ELPGSHAEPP---------- 100
E EA +E + AAE EAAS S + SP A + P E P
Sbjct: 105 KEAPAEGEA---AEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFK 161
Query: 101 --VPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPED 158
G + + ++ A+A + + GG + A A A E G A + P +
Sbjct: 162 KSFKLSGFSFKKNKKEAGEGGEAEAPAAE-GGKDEAAGGAAAAAAEAGAASGEQAAAPGE 220
Query: 159 FVDDVSEEELLGDVLKDRPQEA 180
E GD + +PQEA
Sbjct: 221 EAAAGEEGAAGGDPQEAKPQEA 242
Score = 38.9 bits (89), Expect = 0.019
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 12 AAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPA 71
A EE A G Q E P E + P P P + T+A+ E + E E + A
Sbjct: 224 AGEEGAAGGDPQ---EAKPQEAAVAPEKP--PASDETKAAEEPSKVEEKKAEEAGASAAA 278
Query: 72 AEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGE----APGEQARDERS 117
EA +A+GP +PP E P AE P A AP ++A+ E S
Sbjct: 279 CEAPSAAGPG---APPEQEAAP---AEEPAAAAASSACAAPSQEAQPECS 322
Score = 38.1 bits (87), Expect = 0.033
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTE---------ASSEEVGIAEAG 61
E ++ A G AAE A G + A PG AAG E A +E +A
Sbjct: 190 EGGKDEAAGGAAAAAAEAGAASGE-QAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEK 248
Query: 62 PESEVRTEPAAEAEAASGPS--ESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDS 119
P + T+ A E E+ + AA E P + P Q AP E+ + S
Sbjct: 249 PPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASS 308
Query: 120 RAQAVSEDA 128
A S++A
Sbjct: 309 ACAAPSQEA 317
Score = 37.4 bits (85), Expect = 0.056
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 15 ERAEPGQQQPAAEPPPAEGLLRPAG-PGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAE 73
+ A+P + A E PPA + A P E E +EE G + A E+ P A
Sbjct: 235 QEAKPQEAAVAPEKPPASDETKAAEEPSKVE----EKKAEEAGASAAACEAPSAAGPGAP 290
Query: 74 AEAASGPSESPSPPAAEE---LPGSHAEPPVPAQGEAPGEQARD 114
E + P+E P+ AA P A+P EAP +A +
Sbjct: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQP--ECSPEAPPAEAAE 332
Score = 35.4 bits (80), Expect = 0.21
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 37 PAGPGAPE--AAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPG 94
PA G + A G A++ E G A + E AA E A+G + P +E
Sbjct: 187 PAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP--QEAAV 244
Query: 95 SHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPS 152
+ +PP + +A E ++ E + S A A P E A+EP+
Sbjct: 245 APEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPA 302
Score = 33.9 bits (76), Expect = 0.62
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 10/106 (9%)
Query: 49 EASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAP 108
E E AE G + AA AEA + E + P E G A
Sbjct: 180 EGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEG---------AA 230
Query: 109 GEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFS 154
G ++ + A A + +E +AAE EP +E A+E S
Sbjct: 231 GGDPQEAKPQEAAVAPEKPPASDETKAAE-EPSKVEEKKAEEAGAS 275
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 46.6 bits (109), Expect = 9e-05
Identities = 51/184 (27%), Positives = 67/184 (36%), Gaps = 15/184 (8%)
Query: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
EA E+ PA+ PPP L P A A+ V + P P
Sbjct: 120 EAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAP 179
Query: 71 AAEAEAASGPSESPSP-PAAEELPGSHAEPPVPA-QGEAPGEQARDERSDSRAQAVSEDA 128
A AA P+ +P+P PA P A P A QG G++ ++ +D +S
Sbjct: 180 APAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGIS--- 236
Query: 129 GGNEGRAAEAEPRALENGDA----DEPSFSDPEDFVDDVSEEELLGDVLK--DRPQEADG 182
GR A A NG A P SD + E+ GDV P A G
Sbjct: 237 ----GRPAAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAPG 292
Query: 183 IDSV 186
+ SV
Sbjct: 293 VGSV 296
Score = 33.5 bits (75), Expect = 0.81
Identities = 42/198 (21%), Positives = 72/198 (36%), Gaps = 29/198 (14%)
Query: 3 DAENVAVPEAAEERAEPGQQQPAAEPPP---AEGLLRPAGPGAPEAAGTEASSEEVGIAE 59
+ ++ +VP E + G+ + P P A + P P A G E + E++
Sbjct: 70 EVDSDSVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQL---P 126
Query: 60 AGPESEVRTEPAAEAEAASGPSESPSP---------------PAAEELPGSHAEP----- 99
+ P + P A P+ +P+P PA P P
Sbjct: 127 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAA 186
Query: 100 PVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRA--LENGDADEPSFSDPE 157
P PA AP + A S + G N+G+ + EP A L +G + P+
Sbjct: 187 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQ-EPLADQLHSGISGRPAAGTAA 245
Query: 158 DFVDDVSEEELLGDVLKD 175
+ + ++L G ++ D
Sbjct: 246 ASANGAAIKKLSGPLISD 263
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 46.6 bits (109), Expect = 9e-05
Identities = 51/184 (27%), Positives = 67/184 (36%), Gaps = 15/184 (8%)
Query: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
EA E+ PA+ PPP L P A A+ V + P P
Sbjct: 120 EAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAP 179
Query: 71 AAEAEAASGPSESPSP-PAAEELPGSHAEPPVPA-QGEAPGEQARDERSDSRAQAVSEDA 128
A AA P+ +P+P PA P A P A QG G++ ++ +D +S
Sbjct: 180 APAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGIS--- 236
Query: 129 GGNEGRAAEAEPRALENGDA----DEPSFSDPEDFVDDVSEEELLGDVLK--DRPQEADG 182
GR A A NG A P SD + E+ GDV P A G
Sbjct: 237 ----GRPAAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAPG 292
Query: 183 IDSV 186
+ SV
Sbjct: 293 VGSV 296
Score = 33.5 bits (75), Expect = 0.81
Identities = 42/198 (21%), Positives = 72/198 (36%), Gaps = 29/198 (14%)
Query: 3 DAENVAVPEAAEERAEPGQQQPAAEPPP---AEGLLRPAGPGAPEAAGTEASSEEVGIAE 59
+ ++ +VP E + G+ + P P A + P P A G E + E++
Sbjct: 70 EVDSDSVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQL---P 126
Query: 60 AGPESEVRTEPAAEAEAASGPSESPSP---------------PAAEELPGSHAEP----- 99
+ P + P A P+ +P+P PA P P
Sbjct: 127 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAA 186
Query: 100 PVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRA--LENGDADEPSFSDPE 157
P PA AP + A S + G N+G+ + EP A L +G + P+
Sbjct: 187 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQ-EPLADQLHSGISGRPAAGTAA 245
Query: 158 DFVDDVSEEELLGDVLKD 175
+ + ++L G ++ D
Sbjct: 246 ASANGAAIKKLSGPLISD 263
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 46.6 bits (109), Expect = 9e-05
Identities = 51/184 (27%), Positives = 67/184 (36%), Gaps = 15/184 (8%)
Query: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
EA E+ PA+ PPP L P A A+ V + P P
Sbjct: 131 EAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAP 190
Query: 71 AAEAEAASGPSESPSP-PAAEELPGSHAEPPVPA-QGEAPGEQARDERSDSRAQAVSEDA 128
A AA P+ +P+P PA P A P A QG G++ ++ +D +S
Sbjct: 191 APAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGIS--- 247
Query: 129 GGNEGRAAEAEPRALENGDA----DEPSFSDPEDFVDDVSEEELLGDVLK--DRPQEADG 182
GR A A NG A P SD + E+ GDV P A G
Sbjct: 248 ----GRPAAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAPG 303
Query: 183 IDSV 186
+ SV
Sbjct: 304 VGSV 307
Score = 33.5 bits (75), Expect = 0.81
Identities = 42/198 (21%), Positives = 72/198 (36%), Gaps = 29/198 (14%)
Query: 3 DAENVAVPEAAEERAEPGQQQPAAEPPP---AEGLLRPAGPGAPEAAGTEASSEEVGIAE 59
+ ++ +VP E + G+ + P P A + P P A G E + E++
Sbjct: 81 EVDSDSVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQL---P 137
Query: 60 AGPESEVRTEPAAEAEAASGPSESPSP---------------PAAEELPGSHAEP----- 99
+ P + P A P+ +P+P PA P P
Sbjct: 138 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAA 197
Query: 100 PVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRA--LENGDADEPSFSDPE 157
P PA AP + A S + G N+G+ + EP A L +G + P+
Sbjct: 198 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQ-EPLADQLHSGISGRPAAGTAA 256
Query: 158 DFVDDVSEEELLGDVLKD 175
+ + ++L G ++ D
Sbjct: 257 ASANGAAIKKLSGPLISD 274
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 46.6 bits (109), Expect = 9e-05
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 8/145 (5%)
Query: 7 VAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEV 66
V++ E +E AE +++P AE P APE E EE E E E
Sbjct: 482 VSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEE---EEGQEEEEE 538
Query: 67 RTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE 126
E A +A G SE EE E + EA GE+A + + + + + SE
Sbjct: 539 EDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGE----TEAEAEGEEA-EAKEEKKVEEKSE 593
Query: 127 DAGGNEGRAAEAEPRALENGDADEP 151
+ E A+A+ E + P
Sbjct: 594 EVATKEELVADAKVEKPEKAKSPVP 618
Score = 40.0 bits (92), Expect = 0.009
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 50 ASSEEVGIA------EAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPA 103
A +EE+ ++ EA E E EP AE E + +SP A E+ E
Sbjct: 475 AITEELAVSMKEEKKEAAEEKE--EEPEAEEEEVAA-KKSPVKATAPEVKEEEGEKEEEE 531
Query: 104 QGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDV 163
E E+ +SD + SE G +E E E E E + + E V++
Sbjct: 532 GQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEK 591
Query: 164 SE-----EELLGDVLKDRPQEA 180
SE EEL+ D ++P++A
Sbjct: 592 SEEVATKEELVADAKVEKPEKA 613
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 46.6 bits (109), Expect = 9e-05
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 8/145 (5%)
Query: 7 VAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEV 66
V++ E +E AE +++P AE P APE E EE E E E
Sbjct: 106 VSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEE---EEGQEEEEE 162
Query: 67 RTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE 126
E A +A G SE EE E + EA GE+A + + + + + SE
Sbjct: 163 EDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGE----TEAEAEGEEA-EAKEEKKVEEKSE 217
Query: 127 DAGGNEGRAAEAEPRALENGDADEP 151
+ E A+A+ E + P
Sbjct: 218 EVATKEELVADAKVEKPEKAKSPVP 242
Score = 40.0 bits (92), Expect = 0.009
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 50 ASSEEVGIA------EAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPA 103
A +EE+ ++ EA E E EP AE E + +SP A E+ E
Sbjct: 99 AITEELAVSMKEEKKEAAEEKE--EEPEAEEEEVAA-KKSPVKATAPEVKEEEGEKEEEE 155
Query: 104 QGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDV 163
E E+ +SD + SE G +E E E E E + + E V++
Sbjct: 156 GQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEK 215
Query: 164 SE-----EELLGDVLKDRPQEA 180
SE EEL+ D ++P++A
Sbjct: 216 SEEVATKEELVADAKVEKPEKA 237
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 46.6 bits (109), Expect = 9e-05
Identities = 55/196 (28%), Positives = 74/196 (37%), Gaps = 23/196 (11%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTE 69
P AAE R G + PP A GPGAP AG EA++ I R
Sbjct: 682 PSAAERRTCGGCRDGHCSPPAAGD----PGPGAP--AGPEAAAACNVIVNG-----TRGA 730
Query: 70 PAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAG 129
A A++A P E P PP P P PA E E ++ S E A
Sbjct: 731 AAEGAKSAEPPPEQPPPPPPPAPPKKLLSPEEPAVSEL--ESVKENNCASNCHLDGEAAK 788
Query: 130 GNEGRAAEAEPRALENGDADEPSFSDP--EDFVDDVSEEELLGDVLK--DRPQEADGIDS 185
G AL GD +P+ ++P ED + G V++ +P E +
Sbjct: 789 KLMGE------EALAGGDKSDPNLNNPADEDHAYALRMLPKTGCVIQPVPKPAEKAAMAP 842
Query: 186 VIVVDNVPQVGPDRLE 201
I+ + GP+ LE
Sbjct: 843 CIISSPMLSAGPEDLE 858
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 46.2 bits (108), Expect = 1e-04
Identities = 50/162 (30%), Positives = 66/162 (40%), Gaps = 22/162 (13%)
Query: 12 AAEERAEPGQQQP-----AAEPPPAEGLLRPAGPGAPEAAG-TEASSEEVGIAEAGPESE 65
A +ER GQQ P A PPP +R P E +G +EA S + +A E
Sbjct: 267 AEKERCPAGQQPPQHRVAPARPPPKPREVRKIKPVEVEESGESEAESAPGEVIQA----E 322
Query: 66 VRTEPAAE-----AEAASGPSESPSPPAAEELPGSHAEPPV--PAQGEAPGEQARDERSD 118
V A E A AAS E P AA E + PP G AP + A +E +
Sbjct: 323 VTVHAALENGSTVATAASPAPEEPKAQAAPEKEAAAVAPPERGVGNGRAP-DVAPEEVDE 381
Query: 119 SRAQAVSE----DAGGNEGRAAEAEPRALENGDADEPSFSDP 156
S+ + SE D G ++ ALE D D+ +P
Sbjct: 382 SKKEDFSEADLVDVSAYSGLGEDSAGSALEEDDEDDEEDGEP 423
Score = 35.4 bits (80), Expect = 0.21
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 39 GPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASG--PSESPSPPAAEELPGSH 96
GPG P AAG + ++ S V P A SG P+E PA ++ P
Sbjct: 227 GPGLPRAAGVPQVNSKL----VSKRSRVFQPPPPPPPAPSGDAPAEKERCPAGQQPPQHR 282
Query: 97 AEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGD----ADEPS 152
P P + + + ++ +E A G +A ALENG A P+
Sbjct: 283 VAPARPPPKPREVRKIKPVEVEESGESEAESAPGEVIQAEVTVHAALENGSTVATAASPA 342
Query: 153 FSDPE 157
+P+
Sbjct: 343 PEEPK 347
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 24 PAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSE 82
PAA PP P GL P+ GAP S + G+A P+ T PAA + G
Sbjct: 1175 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGLA 1233
Query: 83 SPSPPAAEELPGSHAEPPVPAQGEA 107
+PSP A P A PP P G A
Sbjct: 1234 TPSPKGAPTTPA--ATPPSPKGGPA 1256
Score = 43.9 bits (102), Expect = 6e-04
Identities = 32/85 (37%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 24 PAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSE 82
PAA PP P GL P GAP S + G+A P+ T PAA + G
Sbjct: 1129 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKG-APTTPAATPPSPKGGLA 1187
Query: 83 SPSPPAAEELPGSHAEPPVPAQGEA 107
+PSP A P A PP P G A
Sbjct: 1188 TPSPKGAPTTPA--ATPPSPKGGLA 1210
Score = 43.1 bits (100), Expect = 0.001
Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 24 PAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASG--- 79
PAA PP P GL P+ GAP S + G+A P+ T PAA + G
Sbjct: 1198 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGPA 1256
Query: 80 ---PSESPSPPAA--EELPGSHAEPP 100
P +P+PPAA L G A PP
Sbjct: 1257 TPPPKGAPTPPAATPPSLKGGLATPP 1282
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 24 PAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSE 82
PAA PP P GL P GAP S + G+A P+ T PAA + G
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKG-APTTPAATPPSPKGGLA 1164
Query: 83 SPSPPAAEELPGSHAEPPVPAQGEA 107
+P P A P A PP P G A
Sbjct: 1165 TPPPKGAPTTPA--ATPPSPKGGLA 1187
Score = 38.9 bits (89), Expect = 0.019
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 24 PAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSE 82
PAA PP P G P+ GAP S + G+A P T PAA + G
Sbjct: 1083 PAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLA-TPPHKGAPTTPAATPPSPKGGLA 1141
Query: 83 SPSPPAAEELPGSHAEPPVPAQGEA 107
+P P A P A PP P G A
Sbjct: 1142 TPPPKGAPTTPA--ATPPSPKGGLA 1164
Score = 36.6 bits (83), Expect = 0.096
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 20/104 (19%)
Query: 24 PAAEPPPAEG-LLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASG--- 79
PAA PP +G L P GAP A S + G A + P+ T PAA + G
Sbjct: 1267 PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKG-APTPPAATPPSPKGSPG 1325
Query: 80 ---PSESPSPPAAEE------------LPGSHAEPPVPAQGEAP 108
P +P+PPA P S P P+ E P
Sbjct: 1326 TPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGP 1369
Score = 35.4 bits (80), Expect = 0.21
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 12/109 (11%)
Query: 9 VPEAAEERAEPGQQQPAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVR 67
+P + + P PAA PP P G P+ AP S + G A P+
Sbjct: 930 IPASPSPKGAP--TPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG-AP 986
Query: 68 TEPAAEAEAASGPSESPSPPAAEELP--------GSHAEPPVPAQGEAP 108
T PAA + G +PSP A P GS A P P P
Sbjct: 987 TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP 1035
Score = 34.7 bits (78), Expect = 0.37
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 24 PAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASG-PS 81
PAA PP P G P+ GAP S + G A P+ T PA + G P+
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKG-APTPPAVTPPSPKGSPA 1024
Query: 82 ESPSPPAAEELPGSHAEPPVP 102
+P P A P A PP P
Sbjct: 1025 ATPFPKGASTPPA--ATPPSP 1043
Score = 34.7 bits (78), Expect = 0.37
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Query: 17 AEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGP----ESEVRTEPAA 72
A P + + PP +G P P GT ++ GP E T PAA
Sbjct: 1315 ATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA 1374
Query: 73 EAEAASGPSES-PSPPAAEELPGSHAEPPVPA 103
GP+ + PSP +P +P PA
Sbjct: 1375 TPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPA 1406
Score = 33.9 bits (76), Expect = 0.62
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 28 PPPAEGLLRPAGPGAPEAAGTEASSEEV-------GIAEAGPESEVRTEPAAEAEAASGP 80
P P EG PA AP + T +S ++ GI + T PAA + G
Sbjct: 894 PFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGG 953
Query: 81 SESPSPPAAEELPGSHAEPPVPAQGEA 107
+PSP A P A PP P G A
Sbjct: 954 PATPSPKWAPTPPA--ATPPSPKGGPA 978
Score = 33.1 bits (74), Expect = 1.1
Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 26 AEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPS 85
A P P P+ GAP S + G A P+ T PAA + G +PS
Sbjct: 923 ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW-APTPPAATPPSPKGGPATPS 981
Query: 86 PPAAEELPGSHAEPPVPAQGEA 107
P A P A PP P G A
Sbjct: 982 PKGAPTPPA--ATPPSPKGGPA 1001
Score = 31.6 bits (70), Expect = 3.1
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 15/89 (16%)
Query: 19 PGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAAS 78
P ++ A P P E PA P + EA+ A + P+ E+ PA + +
Sbjct: 1556 PSPKKTPAIPTPKEA---PATPSSKEASSPPAVTPSTYKGAPSPK-ELLIPPAVTSPS-- 1609
Query: 79 GPSESPSPPAAEELPGSHAEPPVPAQGEA 107
P E+P+PPA PP P +G A
Sbjct: 1610 -PKEAPTPPA--------VTPPSPEKGPA 1629
Score = 30.0 bits (66), Expect = 9.0
Identities = 41/147 (27%), Positives = 50/147 (34%), Gaps = 23/147 (15%)
Query: 24 PAAEPPPAEGLLRPAGPGAPEAAG-------TEASSEEVGIAEAGPESEVRTEPAAEAEA 76
PAA PP +G GP P G T S + A P+ T PAA +
Sbjct: 989 PAATPPSPKG-----GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKG-ASTPPAATPPS 1042
Query: 77 ASG-------PSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAG 129
G P +P+ PAA LP P P+ AP A S A G
Sbjct: 1043 PKGSPAATPLPKGAPTTPAA-TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKG 1101
Query: 130 GNEGRAAEAEPRALENGDADEPSFSDP 156
A A P + + G A P P
Sbjct: 1102 APMPPA--ATPPSPKGGLATPPHKGAP 1126
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 45.8 bits (107), Expect = 2e-04
Identities = 46/160 (28%), Positives = 51/160 (31%), Gaps = 16/160 (10%)
Query: 12 AAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPA 71
AA R GQ PA P P P PGAP A G EAGP E A
Sbjct: 340 AAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKG-----------EAGPTGARGPEGA 388
Query: 72 AEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGN 131
G SP P A PG+ P APG R + A G
Sbjct: 389 QGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGP 448
Query: 132 EG-RAAEAEPRAL----ENGDADEPSFSDPEDFVDDVSEE 166
G + EP E G EP + P+ EE
Sbjct: 449 LGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEE 488
Score = 40.8 bits (94), Expect = 0.005
Identities = 40/158 (25%), Positives = 53/158 (33%), Gaps = 20/158 (12%)
Query: 12 AAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA----------G 61
+A R PG++ P PA P G P A G + + + G A A G
Sbjct: 814 SAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPG 873
Query: 62 PESEVRTEPAAEAEAASGPSESPSPPAAEEL---PGSHAEPPVPAQGEAPGEQARDERSD 118
P+ A A GP + P A PGS+ P P PG +D
Sbjct: 874 PQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPG---PPGPSGKDGPKG 930
Query: 119 SRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDP 156
+R + G G A P G+ EP P
Sbjct: 931 ARGDSGPPGRAGEPGLQGPAGP----PGEKGEPGDDGP 964
Score = 40.4 bits (93), Expect = 0.007
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 21/145 (14%)
Query: 19 PGQQQPAAEP--PPAEGLLRPAGPGAPEAA----GTEASSEEVGIAEAGPESEVRTEPAA 72
PG + A P A G P GP P+ A G + + E GIA E + EP
Sbjct: 416 PGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGP 475
Query: 73 EAEAASGPSESPSPPAAEELPGSHAEP----PVPAQGE--APGEQARDERSDSRAQAVSE 126
+GP +P P E G+ EP P+ GE APG + + A +
Sbjct: 476 -----AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQD---GLAGPK 527
Query: 127 DAGGNEGRAAEAEPRALENGDADEP 151
A G G + A P+ NGD P
Sbjct: 528 GAPGERGPSGLAGPKG-ANGDPGRP 551
Score = 39.7 bits (91), Expect = 0.011
Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 8/143 (5%)
Query: 4 AENVAVPEAAEERAEPGQQQPAAEPPP--AEGLLRPAGPGAPEAAGTEASSEEVGIAEAG 61
A +A P+ +R + G++ P P GL P GP P AG EVG
Sbjct: 757 AAGIAGPKG--DRGDVGEKGPEGAPGKDGGRGLTGPIGPPGP--AGANGEKGEVGPPGPA 812
Query: 62 PESEVRTEPAAEAEAA-SGPSESPSPPAAEELPGSHAEPPVPAQ-GEAPGEQARDERSDS 119
+ R P E GP+ PP A+ PG+ E Q G+A +
Sbjct: 813 GSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAP 872
Query: 120 RAQAVSEDAGGNEGRAAEAEPRA 142
Q + G R A+ P A
Sbjct: 873 GPQGPTGVTGPKGARGAQGPPGA 895
Score = 38.9 bits (89), Expect = 0.019
Identities = 41/152 (26%), Positives = 54/152 (35%), Gaps = 17/152 (11%)
Query: 7 VAVPEAAEERAEPGQQQPAAEP-----PPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAG 61
V +P ER PG P+ EP P A G P GP P A E G
Sbjct: 983 VGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPA-------GEPG 1035
Query: 62 PESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRA 121
E + + A+G A PG+ P P G+Q +R ++ A
Sbjct: 1036 REGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQG--DRGEAGA 1093
Query: 122 QAVSEDAG--GNEGRAAEAEPRALENGDADEP 151
Q +G G G PR + G+A EP
Sbjct: 1094 QGPMGPSGPAGARGIQGPQGPRG-DKGEAGEP 1124
Score = 38.5 bits (88), Expect = 0.025
Identities = 42/139 (30%), Positives = 51/139 (36%), Gaps = 27/139 (19%)
Query: 20 GQQQPAAEPPPAEGLLRPAGP-GAPEAAGTE----ASSEEVGIAEAGPESEV-----RTE 69
G+Q P EP PA GP GAP AG E A E G+ GP E R
Sbjct: 465 GEQGPKGEPGPA-------GPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGF 517
Query: 70 PAAE-------AEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQ 122
P + A GPS P A PG EP +P A G R + + +
Sbjct: 518 PGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPG---ARGLTGRPGDAGPQGK 574
Query: 123 AVSEDAGGNEGRAAEAEPR 141
A G +GR P+
Sbjct: 575 VGPSGAPGEDGRPGPPGPQ 593
Score = 36.2 bits (82), Expect = 0.13
Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 9/142 (6%)
Query: 13 AEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAA 72
A + PG++ P+ P P PG P G + G +AGP+ +V A
Sbjct: 524 AGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPG--DAGPQGKVGPSGAP 581
Query: 73 EAEAASGPSESPSPPAAEELPGSHAEP-PVPAQGE--APGEQARDERSDSRAQAVSEDAG 129
+ GP P P A PG P P A GE GE+ R +
Sbjct: 582 GEDGRPGP---PGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGET 638
Query: 130 GNEGRAAEAEPRALENGDADEP 151
G G A P A E G+ P
Sbjct: 639 GAAGPPGPAGP-AGERGEQGAP 659
Score = 35.0 bits (79), Expect = 0.28
Identities = 38/143 (26%), Positives = 50/143 (34%), Gaps = 8/143 (5%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGI-AEAGPESEVRT 68
P AA PG P P + GA +G + E G+ AGP E +
Sbjct: 899 PGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGE-KG 957
Query: 69 EPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDA 128
EP + GPS + PP + L G +P Q G S + + A
Sbjct: 958 EPGDD-----GPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGA 1012
Query: 129 GGNEGRAAEAEPRALENGDADEP 151
G+ G P L G A EP
Sbjct: 1013 SGDRGPPGPVGPPGL-TGPAGEP 1034
Score = 34.3 bits (77), Expect = 0.48
Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 18/137 (13%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTE 69
P A+ +R PG P PA R PGA G + + AG + +
Sbjct: 1010 PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGA--------AGVKGDRGET 1061
Query: 70 PAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAG 129
A A A GP SP P G +GEA + + A+ + G
Sbjct: 1062 GAVGAPGAPGPPGSPGPAGPTGKQGD--------RGEAGAQGPMGPSGPAGARGIQGPQG 1113
Query: 130 --GNEGRAAEAEPRALE 144
G++G A E R L+
Sbjct: 1114 PRGDKGEAGEPGERGLK 1130
Score = 33.9 bits (76), Expect = 0.62
Identities = 31/97 (31%), Positives = 35/97 (36%), Gaps = 14/97 (14%)
Query: 19 PGQQQPAAEPPPA--EGLLRPAGPGAPEAAGTEASSEEVGIA----EAGPESEVRTEPAA 72
PG + EP A +GL PGAP G E G A AGP E + A
Sbjct: 605 PGPKGANGEPGKAGEKGL-----PGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAP 659
Query: 73 EAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPG 109
G P PP PG VP + APG
Sbjct: 660 GPSGFQGLPGPPGPPGEGGKPGDQG---VPGEAGAPG 693
Score = 33.5 bits (75), Expect = 0.81
Identities = 33/130 (25%), Positives = 43/130 (33%), Gaps = 12/130 (9%)
Query: 16 RAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAE 75
R PG PA P P P PG P +G GP + + A
Sbjct: 209 RGPPG---PAGAPGPQGFQGNPGEPGEPGVSGPMGPR-----GPPGPPGKPGDDGEAGKP 260
Query: 76 AASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAG--GNEG 133
+G P P A PG+ P V PG + ++ A V ++G G G
Sbjct: 261 GKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDG--AKGEAGAPGVKGESGSPGENG 318
Query: 134 RAAEAEPRAL 143
PR L
Sbjct: 319 SPGPMGPRGL 328
Score = 32.3 bits (72), Expect = 1.8
Identities = 47/172 (27%), Positives = 52/172 (30%), Gaps = 21/172 (12%)
Query: 15 ERAEPGQQQP--AAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA-GPESEVRTEPA 71
E+ EPG P A PP +GL G G E G GP E + A
Sbjct: 955 EKGEPGDDGPSGAEGPPGPQGLAGQRG-----IVGLPGQRGERGFPGLPGPSGEPGKQGA 1009
Query: 72 AEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGN 131
A GP PP L G EP A G RD A V D G
Sbjct: 1010 PGASGDRGPPGPVGPPG---LTGPAGEPGREGSPGADGPPGRD-----GAAGVKGDRGET 1061
Query: 132 EGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEADGI 183
A P G P + P D E G + P A GI
Sbjct: 1062 GAVGAPGAP-----GPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGI 1108
Score = 31.2 bits (69), Expect = 4.0
Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 15/154 (9%)
Query: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
+ A +PG + EP + ++ P GP P+ E + G + E
Sbjct: 92 DLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPR----GDRGDKGEKGAPG 147
Query: 71 AAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE---- 126
+ G +P PP PG P + A DE++ V +
Sbjct: 148 PRGRDGEPGTPGNPGPPGP---PGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMG 204
Query: 127 --DAGGNEGRAAEAEPRALEN--GDADEPSFSDP 156
G G A P+ + G+ EP S P
Sbjct: 205 PMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGP 238
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 45.8 bits (107), Expect = 2e-04
Identities = 46/160 (28%), Positives = 51/160 (31%), Gaps = 16/160 (10%)
Query: 12 AAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPA 71
AA R GQ PA P P P PGAP A G EAGP E A
Sbjct: 271 AAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKG-----------EAGPTGARGPEGA 319
Query: 72 AEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGN 131
G SP P A PG+ P APG R + A G
Sbjct: 320 QGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGP 379
Query: 132 EG-RAAEAEPRAL----ENGDADEPSFSDPEDFVDDVSEE 166
G + EP E G EP + P+ EE
Sbjct: 380 LGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEE 419
Score = 40.8 bits (94), Expect = 0.005
Identities = 40/158 (25%), Positives = 53/158 (33%), Gaps = 20/158 (12%)
Query: 12 AAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA----------G 61
+A R PG++ P PA P G P A G + + + G A A G
Sbjct: 745 SAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPG 804
Query: 62 PESEVRTEPAAEAEAASGPSESPSPPAAEEL---PGSHAEPPVPAQGEAPGEQARDERSD 118
P+ A A GP + P A PGS+ P P PG +D
Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPG---PPGPSGKDGPKG 861
Query: 119 SRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDP 156
+R + G G A P G+ EP P
Sbjct: 862 ARGDSGPPGRAGEPGLQGPAGP----PGEKGEPGDDGP 895
Score = 40.4 bits (93), Expect = 0.007
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 21/145 (14%)
Query: 19 PGQQQPAAEP--PPAEGLLRPAGPGAPEAA----GTEASSEEVGIAEAGPESEVRTEPAA 72
PG + A P A G P GP P+ A G + + E GIA E + EP
Sbjct: 347 PGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGP 406
Query: 73 EAEAASGPSESPSPPAAEELPGSHAEP----PVPAQGE--APGEQARDERSDSRAQAVSE 126
+GP +P P E G+ EP P+ GE APG + + A +
Sbjct: 407 -----AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQD---GLAGPK 458
Query: 127 DAGGNEGRAAEAEPRALENGDADEP 151
A G G + A P+ NGD P
Sbjct: 459 GAPGERGPSGLAGPKG-ANGDPGRP 482
Score = 39.7 bits (91), Expect = 0.011
Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 8/143 (5%)
Query: 4 AENVAVPEAAEERAEPGQQQPAAEPPP--AEGLLRPAGPGAPEAAGTEASSEEVGIAEAG 61
A +A P+ +R + G++ P P GL P GP P AG EVG
Sbjct: 688 AAGIAGPKG--DRGDVGEKGPEGAPGKDGGRGLTGPIGPPGP--AGANGEKGEVGPPGPA 743
Query: 62 PESEVRTEPAAEAEAA-SGPSESPSPPAAEELPGSHAEPPVPAQ-GEAPGEQARDERSDS 119
+ R P E GP+ PP A+ PG+ E Q G+A +
Sbjct: 744 GSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAP 803
Query: 120 RAQAVSEDAGGNEGRAAEAEPRA 142
Q + G R A+ P A
Sbjct: 804 GPQGPTGVTGPKGARGAQGPPGA 826
Score = 38.9 bits (89), Expect = 0.019
Identities = 41/152 (26%), Positives = 54/152 (35%), Gaps = 17/152 (11%)
Query: 7 VAVPEAAEERAEPGQQQPAAEP-----PPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAG 61
V +P ER PG P+ EP P A G P GP P A E G
Sbjct: 914 VGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPA-------GEPG 966
Query: 62 PESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRA 121
E + + A+G A PG+ P P G+Q +R ++ A
Sbjct: 967 REGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQG--DRGEAGA 1024
Query: 122 QAVSEDAG--GNEGRAAEAEPRALENGDADEP 151
Q +G G G PR + G+A EP
Sbjct: 1025 QGPMGPSGPAGARGIQGPQGPRG-DKGEAGEP 1055
Score = 38.5 bits (88), Expect = 0.025
Identities = 42/139 (30%), Positives = 51/139 (36%), Gaps = 27/139 (19%)
Query: 20 GQQQPAAEPPPAEGLLRPAGP-GAPEAAGTE----ASSEEVGIAEAGPESEV-----RTE 69
G+Q P EP PA GP GAP AG E A E G+ GP E R
Sbjct: 396 GEQGPKGEPGPA-------GPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGF 448
Query: 70 PAAE-------AEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQ 122
P + A GPS P A PG EP +P A G R + + +
Sbjct: 449 PGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPG---ARGLTGRPGDAGPQGK 505
Query: 123 AVSEDAGGNEGRAAEAEPR 141
A G +GR P+
Sbjct: 506 VGPSGAPGEDGRPGPPGPQ 524
Score = 36.2 bits (82), Expect = 0.13
Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 9/142 (6%)
Query: 13 AEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAA 72
A + PG++ P+ P P PG P G + G +AGP+ +V A
Sbjct: 455 AGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPG--DAGPQGKVGPSGAP 512
Query: 73 EAEAASGPSESPSPPAAEELPGSHAEP-PVPAQGE--APGEQARDERSDSRAQAVSEDAG 129
+ GP P P A PG P P A GE GE+ R +
Sbjct: 513 GEDGRPGP---PGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGET 569
Query: 130 GNEGRAAEAEPRALENGDADEP 151
G G A P A E G+ P
Sbjct: 570 GAAGPPGPAGP-AGERGEQGAP 590
Score = 35.0 bits (79), Expect = 0.28
Identities = 38/143 (26%), Positives = 50/143 (34%), Gaps = 8/143 (5%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGI-AEAGPESEVRT 68
P AA PG P P + GA +G + E G+ AGP E +
Sbjct: 830 PGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGE-KG 888
Query: 69 EPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDA 128
EP + GPS + PP + L G +P Q G S + + A
Sbjct: 889 EPGDD-----GPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGA 943
Query: 129 GGNEGRAAEAEPRALENGDADEP 151
G+ G P L G A EP
Sbjct: 944 SGDRGPPGPVGPPGL-TGPAGEP 965
Score = 34.3 bits (77), Expect = 0.48
Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 18/137 (13%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTE 69
P A+ +R PG P PA R PGA G + + AG + +
Sbjct: 941 PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGA--------AGVKGDRGET 992
Query: 70 PAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAG 129
A A A GP SP P G +GEA + + A+ + G
Sbjct: 993 GAVGAPGAPGPPGSPGPAGPTGKQGD--------RGEAGAQGPMGPSGPAGARGIQGPQG 1044
Query: 130 --GNEGRAAEAEPRALE 144
G++G A E R L+
Sbjct: 1045 PRGDKGEAGEPGERGLK 1061
Score = 33.9 bits (76), Expect = 0.62
Identities = 31/97 (31%), Positives = 35/97 (36%), Gaps = 14/97 (14%)
Query: 19 PGQQQPAAEPPPA--EGLLRPAGPGAPEAAGTEASSEEVGIA----EAGPESEVRTEPAA 72
PG + EP A +GL PGAP G E G A AGP E + A
Sbjct: 536 PGPKGANGEPGKAGEKGL-----PGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAP 590
Query: 73 EAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPG 109
G P PP PG VP + APG
Sbjct: 591 GPSGFQGLPGPPGPPGEGGKPGDQG---VPGEAGAPG 624
Score = 33.5 bits (75), Expect = 0.81
Identities = 33/130 (25%), Positives = 43/130 (33%), Gaps = 12/130 (9%)
Query: 16 RAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAE 75
R PG PA P P P PG P +G GP + + A
Sbjct: 140 RGPPG---PAGAPGPQGFQGNPGEPGEPGVSGPMGPR-----GPPGPPGKPGDDGEAGKP 191
Query: 76 AASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAG--GNEG 133
+G P P A PG+ P V PG + ++ A V ++G G G
Sbjct: 192 GKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDG--AKGEAGAPGVKGESGSPGENG 249
Query: 134 RAAEAEPRAL 143
PR L
Sbjct: 250 SPGPMGPRGL 259
Score = 32.3 bits (72), Expect = 1.8
Identities = 47/172 (27%), Positives = 52/172 (30%), Gaps = 21/172 (12%)
Query: 15 ERAEPGQQQP--AAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA-GPESEVRTEPA 71
E+ EPG P A PP +GL G G E G GP E + A
Sbjct: 886 EKGEPGDDGPSGAEGPPGPQGLAGQRG-----IVGLPGQRGERGFPGLPGPSGEPGKQGA 940
Query: 72 AEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGN 131
A GP PP L G EP A G RD A V D G
Sbjct: 941 PGASGDRGPPGPVGPPG---LTGPAGEPGREGSPGADGPPGRD-----GAAGVKGDRGET 992
Query: 132 EGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEADGI 183
A P G P + P D E G + P A GI
Sbjct: 993 GAVGAPGAP-----GPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGI 1039
Score = 30.4 bits (67), Expect = 6.9
Identities = 31/147 (21%), Positives = 48/147 (32%), Gaps = 15/147 (10%)
Query: 18 EPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAA 77
+PG + EP + ++ P GP P+ E + G + E +
Sbjct: 30 QPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPR----GDRGDKGEKGAPGPRGRDGE 85
Query: 78 SGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE------DAGGN 131
G +P PP PG P + A DE++ V + G
Sbjct: 86 PGTPGNPGPPGP---PGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGP 142
Query: 132 EGRAAEAEPRALEN--GDADEPSFSDP 156
G A P+ + G+ EP S P
Sbjct: 143 PGPAGAPGPQGFQGNPGEPGEPGVSGP 169
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 45.8 bits (107), Expect = 2e-04
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 7 VAVPEAAEERA-EPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA-GPE- 63
V PE A+ A E + P A+ P E PA +PE A + A E AEA PE
Sbjct: 544 VKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEK 603
Query: 64 --SEVRTEPAAEAEA-------ASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARD 114
S V+ E + AEA A P+E SP A+ A+ P A+ E
Sbjct: 604 AKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSP 663
Query: 115 ERSDS--RAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEE 166
E++ S +A+A S + + +A P ++ +E PE V EE
Sbjct: 664 EKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA--KSPEKAKSPVKEE 715
Score = 39.7 bits (91), Expect = 0.011
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 13/180 (7%)
Query: 1 MQDAENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA 60
++ E + V E +E+ ++Q E E + A E G E E AE
Sbjct: 438 VKSEEKIKVVEKSEKETVIVEEQ-TEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEG 496
Query: 61 GPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR 120
G E E ++ PA EA AS E+ SP E + A+ P + ++P E E++ S
Sbjct: 497 G-EEETKSPPAEEA--ASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSP 553
Query: 121 AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEA 180
A+ E + E ++ E +A P+ + ++EE P++A
Sbjct: 554 AK---------EEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKA 604
Score = 36.6 bits (83), Expect = 0.096
Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 26/163 (15%)
Query: 5 ENVAVPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPES 64
E V PE A+ + + P E P E + P E +EV + E ++
Sbjct: 791 EEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKE--------EEKPQEVKVKEPPKKA 842
Query: 65 EVRTEPAA-------EAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERS 117
E PA +++ P + P EE E P ++ EA E+A D++
Sbjct: 843 EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKK 902
Query: 118 ----DSRAQA---VSEDAGGNE-GRAAEAEPRALENGDADEPS 152
+ A A V EDA E A+ EP ++ A EPS
Sbjct: 903 VPTPEKEAPAKVEVKEDAKPKEKTEVAKKEP---DDAKAKEPS 942
Score = 36.2 bits (82), Expect = 0.13
Identities = 43/135 (31%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 4 AENVAVPEA-AEERAEPGQQQPA-AEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEA- 60
AE A PE A+ + + PA A+ P E PA +PE A + A E EA
Sbjct: 506 AEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAK 565
Query: 61 GPESEVRTEPAA----------EAEAASGPSESPSPPAAE----ELPGSHAEPPVPAQGE 106
PE E PA E A P+E+ SP A+ E S AE P + E
Sbjct: 566 SPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEE 625
Query: 107 A--PGEQARDERSDS 119
A P E E++ S
Sbjct: 626 AKSPAEVKSPEKAKS 640
Score = 34.7 bits (78), Expect = 0.37
Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 11/166 (6%)
Query: 8 AVPEAAEERAEPGQQQPAAEPP-PAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEV 66
A P+ E++ ++ P E P P + P+ + EA EE + P E
Sbjct: 849 ATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEK 908
Query: 67 RTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARD----------ER 116
E + + P E E EP PA+ + + +D E+
Sbjct: 909 EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEK 968
Query: 117 SDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDD 162
+ A+A +D ++ + +A ++ D+ PE +D
Sbjct: 969 PKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATED 1014
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 45.8 bits (107), Expect = 2e-04
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPA--GPGAPEAAGTEASSEEVGIAEAGPESEVRT 68
E EE E + EPPPA+ L + A P PEAA EA++E SE
Sbjct: 80 EEEEEDEEALLEDEDEEPPPAQALGQAAQPPPEPPEAAAMEAAAEP-------DASEKPA 132
Query: 69 EPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDA 128
E A + +G E E+ P + P E PG++A +E+ D + S+ A
Sbjct: 133 EATAGSGGVNGGEEQGLGKREEDEPEERSGDETPG-SEVPGDKAAEEQGDDQDSEKSKPA 191
Query: 129 GGNEGR 134
G + R
Sbjct: 192 GSDGER 197
Score = 45.4 bits (106), Expect = 2e-04
Identities = 43/162 (26%), Positives = 59/162 (36%), Gaps = 31/162 (19%)
Query: 44 EAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPS--------------------ES 83
EA E +E G AGP + EP A + GP E
Sbjct: 35 EALDAEMLEDEAGGGGAGPGGACKAEPRPVAASGGGPGGDEEEDEEEEEEDEEALLEDED 94
Query: 84 PSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRAL 143
PP A+ L + PP P + A A + S+ A+A + G N G E + L
Sbjct: 95 EEPPPAQALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGGVNGG-----EEQGL 149
Query: 144 ENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEADGIDS 185
+ DEP E D+ E+ GD K ++ D DS
Sbjct: 150 GKREEDEPE----ERSGDETPGSEVPGD--KAAEEQGDDQDS 185
Score = 40.8 bits (94), Expect = 0.005
Identities = 38/135 (28%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 2 QDAENVAVPEAAEERAEPGQ-----QQPAAEPPPAEGLLRPAGPGAPE--AAGTEASSEE 54
++ + A+ E +E P Q QP EPP A + A P A E A T S
Sbjct: 82 EEEDEEALLEDEDEEPPPAQALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGGV 141
Query: 55 VGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEEL---PGSHAEPPVPAQGEAPGEQ 111
G E G EP + + SE P AAEE S P + GE G +
Sbjct: 142 NGGEEQGLGKREEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEKSKPAGSDGERRGVK 201
Query: 112 ARDERSDSRAQAVSE 126
+ + D +A E
Sbjct: 202 RQRDEKDEHGRAYYE 216
Score = 33.9 bits (76), Expect = 0.62
Identities = 35/137 (25%), Positives = 46/137 (33%), Gaps = 33/137 (24%)
Query: 10 PEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAG---PESEV 66
PE E A +P A PAE G E G E+ +G P SEV
Sbjct: 111 PEPPEAAAMEAAAEPDASEKPAEATAGSGGVNGGEEQGLGKREEDEPEERSGDETPGSEV 170
Query: 67 RTEPAAEAEAASGPSESPSPPAA-------------------------EELPGSHAEPPV 101
+ AAE + SE P + EE S ++ P+
Sbjct: 171 PGDKAAEEQGDDQDSEKSKPAGSDGERRGVKRQRDEKDEHGRAYYEFREEAYHSRSKSPL 230
Query: 102 PAQGEAPGEQARDERSD 118
P P E+A+DE D
Sbjct: 231 P-----PEEEAKDEEED 242
>gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]
Length = 1464
Score = 45.4 bits (106), Expect = 2e-04
Identities = 44/127 (34%), Positives = 56/127 (44%), Gaps = 16/127 (12%)
Query: 44 EAAGTEASSEEVGIAEAGPESEVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPA 103
+ EA+ EV AE PE E EP EA +G +E P AAE + G +P
Sbjct: 1264 QGLNVEAAEPEVEAAE--PEVEA-AEPEVEAAEPNGEAEGPDGEAAEPI-GEAGQP--NG 1317
Query: 104 QGEAPGEQARDERSDSRAQAVSEDAGGNEGRAAEAEPRALENGDADEP---SFSDPEDFV 160
+ E P A DE + + E A EG+A E E GDADEP DPE+
Sbjct: 1318 EAEQPNGDA-DEPDGAGIEDPEERAEEPEGKAEEPE------GDADEPDGVGIEDPEEGE 1370
Query: 161 DDVSEEE 167
D + E
Sbjct: 1371 DQEIQVE 1377
Score = 35.8 bits (81), Expect = 0.16
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Query: 63 ESEVRTEPAAEAEAASGPSESPS--PPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSR 120
E E E AA A AA+ E+ P + G + E P + EA + +
Sbjct: 1232 EEEEEDEAAAAAAAAAQEVEANVHVPQVVLRIQGLNVEAAEP-EVEAAEPEVEAAEPEVE 1290
Query: 121 AQAVSEDAGGNEGRAAEAEPRALE--------NGDADEPSFSDPEDFVDDVSEEELLGDV 172
A + +A G +G AAE A + NGDADEP + ED + E E +
Sbjct: 1291 AAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGKAEE 1350
Query: 173 LKDRPQEADGI 183
+ E DG+
Sbjct: 1351 PEGDADEPDGV 1361
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,886,810
Number of Sequences: 37866
Number of extensions: 1796742
Number of successful extensions: 18165
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 1263
Number of HSP's that attempted gapping in prelim test: 12378
Number of HSP's gapped (non-prelim): 5549
length of query: 814
length of database: 18,247,518
effective HSP length: 111
effective length of query: 703
effective length of database: 14,044,392
effective search space: 9873207576
effective search space used: 9873207576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.