Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EIF2A Sequence: fasta or formatted (585aa) NCBI GI: 54873624
Description:

eukaryotic translation initiation factor 2A

Referenced in:

Translation Factors
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         47           2
 C cysteine            1.7         10           1
 D aspartate           3.9         23           1
 E glutamate           5.5         32           3
 F phenylalanine       4.1         24           2
 G glycine             5.8         34           1
 H histidine           2.2         13           1
 I isoleucine          4.3         25           2
 K lysine              9.4         55           3
 L leucine             8.2         48           2
 M methionine          1.2          7           1
 N asparagine          6.7         39           3
 P proline             7.5         44           2
 Q glutamine           4.3         25           1
 R arginine            2.2         13           1
 S serine              6.7         39           3
 T threonine           6.5         38           2
 V valine              6.3         37           2
 W tryptophan          1.9         11           1
 Y tyrosine            3.6         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 2A 
EIF3B                 0.054   eukaryotic translation initiation factor 3, subunit ...
EIF3B                 0.054   eukaryotic translation initiation factor 3, subunit ...
WIBG                  0.037   within bgcn homolog isoform 2 
WIBG                  0.037   within bgcn homolog isoform 1 
SPEN                  0.017   spen homolog, transcriptional regulator 
AP3D1                 0.016   adaptor-related protein complex 3, delta 1 subunit ...
MAP1B                 0.014   microtubule-associated protein 1B 
WDSUB1                0.014   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.014   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.014   WD repeat, sterile alpha motif and U-box domain con...
NEFH                  0.013   neurofilament, heavy polypeptide 200kDa 
H1F0                  0.012   H1 histone family, member 0 
CAPRIN2               0.012   C1q domain containing 1 isoform 1 
CAPRIN2               0.012   C1q domain containing 1 isoform 2 
TRDN                  0.012   triadin 
MAP1A                 0.011   microtubule-associated protein 1A 
MYH4                  0.011   myosin, heavy polypeptide 4, skeletal muscle 
MYH6                  0.011   myosin heavy chain 6 
WDR5B                 0.011   WD repeat domain 5B 
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MYH7B                 0.010   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
AMBRA1                0.010   activating molecule in beclin-1-regulated autophagy ...
INCENP                0.010   inner centromere protein antigens 135/155kDa isofor...
CAPRIN1               0.010   membrane component chromosome 11 surface marker 1 is...
CAPRIN1               0.010   membrane component chromosome 11 surface marker 1 is...
INCENP                0.009   inner centromere protein antigens 135/155kDa isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press