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Search of human proteins with 33188433
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens]
(1528 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens] 3064 0.0
gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens] 2168 0.0
gi|41281907 StAR-related lipid transfer (START) domain containin... 1102 0.0
gi|41281898 StAR-related lipid transfer (START) domain containin... 1101 0.0
gi|16445031 StAR-related lipid transfer (START) domain containin... 999 0.0
gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens] 898 0.0
gi|215820652 StAR-related lipid transfer (START) domain containi... 653 0.0
gi|215820650 StAR-related lipid transfer (START) domain containi... 653 0.0
gi|31543659 StAR-related lipid transfer (START) domain containin... 653 0.0
gi|39932589 Rho GTPase activating protein 18 [Homo sapiens] 99 2e-20
gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens] 92 5e-18
gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo sapi... 92 5e-18
gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapi... 92 5e-18
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom... 88 6e-17
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom... 88 6e-17
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H... 88 6e-17
gi|54860079 nadrin isoform 1 [Homo sapiens] 88 6e-17
gi|54860105 nadrin isoform 2 [Homo sapiens] 88 6e-17
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 85 6e-16
gi|59710113 Rho GTPase activating protein 28 isoform a [Homo sap... 84 1e-15
gi|59710111 Rho GTPase activating protein 28 isoform b [Homo sap... 84 1e-15
gi|40255080 hypothetical protein LOC158763 [Homo sapiens] 83 2e-15
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 83 2e-15
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 83 2e-15
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ... 82 4e-15
gi|5803145 ralA binding protein 1 [Homo sapiens] 82 4e-15
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 82 4e-15
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 82 4e-15
gi|156071465 Rho GTPase activating protein 4 [Homo sapiens] 82 5e-15
gi|26986534 Rho GTPase activating protein 12 [Homo sapiens] 79 3e-14
>gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens]
Length = 1528
Score = 3064 bits (7943), Expect = 0.0
Identities = 1528/1528 (100%), Positives = 1528/1528 (100%)
Query: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS
Sbjct: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
Query: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC
Sbjct: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
Query: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE
Sbjct: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
Query: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP
Sbjct: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
Query: 241 PKDENERSTCNVVQDEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
PKDENERSTCNVVQDEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS
Sbjct: 241 PKDENERSTCNVVQDEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
Query: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM
Sbjct: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
Query: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST
Sbjct: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
Query: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAEIEAKEACDWLRATGFPQYAQLYEDFLFPID 480
DLPSSTPVANSGTKPKTTAIQGISEKEKAEIEAKEACDWLRATGFPQYAQLYEDFLFPID
Sbjct: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAEIEAKEACDWLRATGFPQYAQLYEDFLFPID 480
Query: 481 ISLVKREHDFLDRDAIEALCRRLNTLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTF 540
ISLVKREHDFLDRDAIEALCRRLNTLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTF
Sbjct: 481 ISLVKREHDFLDRDAIEALCRRLNTLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTF 540
Query: 541 QRDSKRWSRLEEFDVFSPKQDLVPGSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSST 600
QRDSKRWSRLEEFDVFSPKQDLVPGSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSST
Sbjct: 541 QRDSKRWSRLEEFDVFSPKQDLVPGSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSST 600
Query: 601 GSLPSHAPPSEDAATPRTNSVISVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTA 660
GSLPSHAPPSEDAATPRTNSVISVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTA
Sbjct: 601 GSLPSHAPPSEDAATPRTNSVISVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTA 660
Query: 661 KSKTRSLLKRMESLKLKSSHHSKHKAPSKLGLIISGPILQEGMDEEKLKQLNCVEISALN 720
KSKTRSLLKRMESLKLKSSHHSKHKAPSKLGLIISGPILQEGMDEEKLKQLNCVEISALN
Sbjct: 661 KSKTRSLLKRMESLKLKSSHHSKHKAPSKLGLIISGPILQEGMDEEKLKQLNCVEISALN 720
Query: 721 GNRINVPMVRKRSVSNSTQTSSSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFD 780
GNRINVPMVRKRSVSNSTQTSSSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFD
Sbjct: 721 GNRINVPMVRKRSVSNSTQTSSSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFD 780
Query: 781 PFNQSTFNNVVEQNFKNRESYPEDTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRT 840
PFNQSTFNNVVEQNFKNRESYPEDTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRT
Sbjct: 781 PFNQSTFNNVVEQNFKNRESYPEDTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRT 840
Query: 841 GSFHGPGHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENE 900
GSFHGPGHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENE
Sbjct: 841 GSFHGPGHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENE 900
Query: 901 DIFPELDDILYHVKGMQRIVNQWSEKFSDEGDSDSALDSVSPCPSSPKQIHLDVDNDRTT 960
DIFPELDDILYHVKGMQRIVNQWSEKFSDEGDSDSALDSVSPCPSSPKQIHLDVDNDRTT
Sbjct: 901 DIFPELDDILYHVKGMQRIVNQWSEKFSDEGDSDSALDSVSPCPSSPKQIHLDVDNDRTT 960
Query: 961 PSDLDSTGNSLNEPEEPSEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQI 1020
PSDLDSTGNSLNEPEEPSEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQI
Sbjct: 961 PSDLDSTGNSLNEPEEPSEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQI 1020
Query: 1021 NCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPL 1080
NCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPL
Sbjct: 1021 NCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPL 1080
Query: 1081 TVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEG 1140
TVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEG
Sbjct: 1081 TVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEG 1140
Query: 1141 QSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREV 1200
QSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREV
Sbjct: 1141 QSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREV 1200
Query: 1201 LQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQ 1260
LQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQ
Sbjct: 1201 LQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQ 1260
Query: 1261 KDLNENLAATQGLAHMIAECKKLFQVPEEMSRCRNSYTEQELKPLTLEALGHLGNDDSAD 1320
KDLNENLAATQGLAHMIAECKKLFQVPEEMSRCRNSYTEQELKPLTLEALGHLGNDDSAD
Sbjct: 1261 KDLNENLAATQGLAHMIAECKKLFQVPEEMSRCRNSYTEQELKPLTLEALGHLGNDDSAD 1320
Query: 1321 YQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEE 1380
YQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEE
Sbjct: 1321 YQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEE 1380
Query: 1381 ILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKG 1440
ILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKG
Sbjct: 1381 ILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKG 1440
Query: 1441 ACALLLTSVDHDRAPVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSF 1500
ACALLLTSVDHDRAPVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSF
Sbjct: 1441 ACALLLTSVDHDRAPVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSF 1500
Query: 1501 GHLCAAEVVKIRDSFSNQNTETKDTKSR 1528
GHLCAAEVVKIRDSFSNQNTETKDTKSR
Sbjct: 1501 GHLCAAEVVKIRDSFSNQNTETKDTKSR 1528
>gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens]
Length = 1091
Score = 2168 bits (5618), Expect = 0.0
Identities = 1078/1079 (99%), Positives = 1079/1079 (100%)
Query: 450 EIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKC 509
+IEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKC
Sbjct: 13 QIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKC 72
Query: 510 AVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGSPDD 569
AVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGSPDD
Sbjct: 73 AVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGSPDD 132
Query: 570 SHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCSSSN 629
SHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCSSSN
Sbjct: 133 SHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCSSSN 192
Query: 630 LAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSKHKAPSK 689
LAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSKHKAPSK
Sbjct: 193 LAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSKHKAPSK 252
Query: 690 LGLIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVRKRSVSNSTQTSSSSSQSET 749
LGLIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVRKRSVSNSTQTSSSSSQSET
Sbjct: 253 LGLIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVRKRSVSNSTQTSSSSSQSET 312
Query: 750 SSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDTVFYI 809
SSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDTVFYI
Sbjct: 313 SSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDTVFYI 372
Query: 810 PEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKRRNSS 869
PEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKRRNSS
Sbjct: 373 PEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKRRNSS 432
Query: 870 SSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEKFSD 929
SSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEKFSD
Sbjct: 433 SSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEKFSD 492
Query: 930 EGDSDSALDSVSPCPSSPKQIHLDVDNDRTTPSDLDSTGNSLNEPEEPSEIPERRDSGVG 989
EGDSDSALDSVSPCPSSPKQIHLDVDNDRTTPSDLDSTGNSLNEPEEPSEIPERRDSGVG
Sbjct: 493 EGDSDSALDSVSPCPSSPKQIHLDVDNDRTTPSDLDSTGNSLNEPEEPSEIPERRDSGVG 552
Query: 990 ASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPS 1049
ASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPS
Sbjct: 553 ASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPS 612
Query: 1050 NKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQ 1109
NKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQ
Sbjct: 613 NKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQ 672
Query: 1110 VGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSET 1169
VGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSET
Sbjct: 673 VGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSET 732
Query: 1170 FLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCL 1229
FLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCL
Sbjct: 733 FLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCL 792
Query: 1230 APSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEE 1289
APSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEE
Sbjct: 793 APSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEE 852
Query: 1290 MSRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDGLFKEVKEKFKGWVSYSTS 1349
MSRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDGLFKEVKEKFKGWVSYSTS
Sbjct: 853 MSRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDGLFKEVKEKFKGWVSYSTS 912
Query: 1350 EQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQT 1409
EQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQT
Sbjct: 913 EQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQT 972
Query: 1410 EIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDRAPVVGVRVNVLLSRYL 1469
EIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDRAPVVGVRVNVLLSRYL
Sbjct: 973 EIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDRAPVVGVRVNVLLSRYL 1032
Query: 1470 IEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTKSR 1528
IEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTKSR
Sbjct: 1033 IEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTKSR 1091
>gi|41281907 StAR-related lipid transfer (START) domain containing 13
isoform beta [Homo sapiens]
Length = 1105
Score = 1102 bits (2849), Expect = 0.0
Identities = 606/1096 (55%), Positives = 776/1096 (70%), Gaps = 53/1096 (4%)
Query: 447 EKAEIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTL 506
++ EIEAKEACDWLRA GFPQYAQLYED FPI+I VK +HDFL++D +E LCRRLNTL
Sbjct: 46 QRREIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNTL 105
Query: 507 NKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGS 566
NKCA MKL+++ RK+ DDSDE++ C IS KWTFQR S+RWSR+++ P+ D GS
Sbjct: 106 NKCASMKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDR-NGS 163
Query: 567 PDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCS 626
P + ++ S L DLSE EV S+ S SS GS S + P + C
Sbjct: 164 PGGTGMRNTTSSESVLTDLSE-PEVCSIHSESSGGS-DSRSQPGQ-------------CC 208
Query: 627 SSNLAGNDDSF--GSLPSP-KELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSK 683
+ N D SLP P +++ + F K +EK +++ +S LKRME+L+ K +H +
Sbjct: 209 TDNPVMLDAPLVSSSLPQPPRDVLNHPFHPK-NEKPTRARAKSFLKRMETLRGKGAH-GR 266
Query: 684 HKAPSKLG-LIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVR-KRSVSNSTQTS 741
HK + G L+ISGP+LQ+ + E K + C++I NG+ N P ++ + S ++S
Sbjct: 267 HKGSGRTGGLVISGPMLQQ--EPESFKAMQCIQIP--NGDLQNSPPPACRKGLPCSGKSS 322
Query: 742 SSSSQSE-TSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRES 800
SS SE +SS VSTP + R NKR GMYLE D + + +Q+ +
Sbjct: 323 GESSPSEHSSSGVSTPC--LKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFH 380
Query: 801 YPEDTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSP 860
E+ V +IP+DHKPGTFPKAL+ S SP+ ++ VNWRTGS ISL RE +
Sbjct: 381 SQENLVVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRTGS------ISLGREQVPGAR 434
Query: 861 KELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIV 920
+ R +S +SR+SIYDNVPGS LY+S+GDL DLE +D+FP LDDIL HV G+Q +V
Sbjct: 435 EP--RLMASCHRASRVSIYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVV 492
Query: 921 NQWSEKFSDEGDSDSAL---DSVSPCPSSPKQIHLD-----VDNDRTTPSDLDSTGNSLN 972
+ WS+ E + L +S PS P QI LD V RTTPSD++ SLN
Sbjct: 493 DDWSKDVLPELQTHDTLVGEPGLSTFPS-PNQITLDFEGNSVSEGRTTPSDVERDVTSLN 551
Query: 973 EPEEPSEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQ 1032
E E P + +RRDSGVGASLTR NR RLRW+SFQ SH+P S I+ Q+ +Q++LLQ
Sbjct: 552 ESEPPG-VRDRRDSGVGASLTRPNR-RLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQ 609
Query: 1033 KYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLP 1092
++SLL+LTA++EK++ SNKHG++W+VPKFMKR+KVPDYKD++VFGVPL V+VQRTGQPLP
Sbjct: 610 RFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLP 669
Query: 1093 QSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQ 1152
QSIQQA+RYLR++CLDQVGLFRKSGVKSRI ALRQMNE + VNYE QSAYDVADM+KQ
Sbjct: 670 QSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQ 729
Query: 1153 YFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVT 1212
+FRDLPEPL TNKLSETFL IYQYV K+QRLQA++AAI+LL DENREVLQTLL FL+DV
Sbjct: 730 FFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVV 789
Query: 1213 AAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQG 1272
V+ENQMTP NLAVCLAPSLFHLN LK+E SSPRV+Q+K + GKPDQKDLNENLAA QG
Sbjct: 790 NLVEENQMTPMNLAVCLAPSLFHLNLLKKE-SSPRVIQKKYATGKPDQKDLNENLAAAQG 848
Query: 1273 LAHMIAECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDG 1331
LAHMI EC +LF+VP E+ ++ RNSY E E+ TLE LG + A + +L + G
Sbjct: 849 LAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQG 908
Query: 1332 LFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHL 1391
L KE KEKFKGWV+ S+++ +L++KKV +G PL+LW++ +EV A P +L R+L+E+HL
Sbjct: 909 LQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHL 968
Query: 1392 WDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDH 1451
WD D + KV+E LD QTEIYQYV NSMAPHP+RD+VVLRTW+T+LPKG C L+ SV+H
Sbjct: 969 WDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEH 1028
Query: 1452 DRAPVV-GVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVK 1510
+ A ++ GVR V+ S+YLIEPCG GKS+LT++CR+DL+GH PEWY+K FGHLCAAEV +
Sbjct: 1029 EEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVAR 1088
Query: 1511 IRDSFSNQNTETKDTK 1526
IR+SF E +TK
Sbjct: 1089 IRNSFQPLIAEGPETK 1104
>gi|41281898 StAR-related lipid transfer (START) domain containing 13
isoform alpha [Homo sapiens]
Length = 1113
Score = 1101 bits (2848), Expect = 0.0
Identities = 607/1097 (55%), Positives = 776/1097 (70%), Gaps = 53/1097 (4%)
Query: 446 KEKAEIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNT 505
K + EIEAKEACDWLRA GFPQYAQLYED FPI+I VK +HDFL++D +E LCRRLNT
Sbjct: 53 KIQQEIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNT 112
Query: 506 LNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPG 565
LNKCA MKL+++ RK+ DDSDE++ C IS KWTFQR S+RWSR+++ P+ D G
Sbjct: 113 LNKCASMKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDR-NG 170
Query: 566 SPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVC 625
SP + ++ S L DLSE EV S+ S SS GS S + P + C
Sbjct: 171 SPGGTGMRNTTSSESVLTDLSE-PEVCSIHSESSGGS-DSRSQPGQ-------------C 215
Query: 626 SSSNLAGNDDSF--GSLPSP-KELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHS 682
+ N D SLP P +++ + F K +EK +++ +S LKRME+L+ K +H
Sbjct: 216 CTDNPVMLDAPLVSSSLPQPPRDVLNHPFHPK-NEKPTRARAKSFLKRMETLRGKGAH-G 273
Query: 683 KHKAPSKLG-LIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVR-KRSVSNSTQT 740
+HK + G L+ISGP+LQ+ + E K + C++I NG+ N P ++ + S ++
Sbjct: 274 RHKGSGRTGGLVISGPMLQQ--EPESFKAMQCIQIP--NGDLQNSPPPACRKGLPCSGKS 329
Query: 741 SSSSSQSE-TSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRE 799
S SS SE +SS VSTP + R NKR GMYLE D + + +Q+ +
Sbjct: 330 SGESSPSEHSSSGVSTPC--LKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEF 387
Query: 800 SYPEDTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDS 859
E+ V +IP+DHKPGTFPKAL+ S SP+ ++ VNWRTGS ISL RE +
Sbjct: 388 HSQENLVVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRTGS------ISLGREQVPGA 441
Query: 860 PKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRI 919
+ R +S +SR+SIYDNVPGS LY+S+GDL DLE +D+FP LDDIL HV G+Q +
Sbjct: 442 REP--RLMASCHRASRVSIYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEV 499
Query: 920 VNQWSEKFSDEGDSDSAL---DSVSPCPSSPKQIHLD-----VDNDRTTPSDLDSTGNSL 971
V+ WS+ E + L +S PS P QI LD V RTTPSD++ SL
Sbjct: 500 VDDWSKDVLPELQTHDTLVGEPGLSTFPS-PNQITLDFEGNSVSEGRTTPSDVERDVTSL 558
Query: 972 NEPEEPSEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLL 1031
NE E P + +RRDSGVGASLTR NR RLRW+SFQ SH+P S I+ Q+ +Q++LL
Sbjct: 559 NESEPPG-VRDRRDSGVGASLTRPNR-RLRWNSFQLSHQPRPAPASPHISSQTASQLSLL 616
Query: 1032 QKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPL 1091
Q++SLL+LTA++EK++ SNKHG++W+VPKFMKR+KVPDYKD++VFGVPL V+VQRTGQPL
Sbjct: 617 QRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPL 676
Query: 1092 PQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLK 1151
PQSIQQA+RYLR++CLDQVGLFRKSGVKSRI ALRQMNE + VNYE QSAYDVADM+K
Sbjct: 677 PQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVK 736
Query: 1152 QYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDV 1211
Q+FRDLPEPL TNKLSETFL IYQYV K+QRLQA++AAI+LL DENREVLQTLL FL+DV
Sbjct: 737 QFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDV 796
Query: 1212 TAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQ 1271
V+ENQMTP NLAVCLAPSLFHLN LK+E SSPRV+Q+K + GKPDQKDLNENLAA Q
Sbjct: 797 VNLVEENQMTPMNLAVCLAPSLFHLNLLKKE-SSPRVIQKKYATGKPDQKDLNENLAAAQ 855
Query: 1272 GLAHMIAECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVD 1330
GLAHMI EC +LF+VP E+ ++ RNSY E E+ TLE LG + A + +L +
Sbjct: 856 GLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQ 915
Query: 1331 GLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQH 1390
GL KE KEKFKGWV+ S+++ +L++KKV +G PL+LW++ +EV A P +L R+L+E+H
Sbjct: 916 GLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERH 975
Query: 1391 LWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVD 1450
LWD D + KV+E LD QTEIYQYV NSMAPHP+RD+VVLRTW+T+LPKG C L+ SV+
Sbjct: 976 LWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVE 1035
Query: 1451 HDRAPVV-GVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVV 1509
H+ A ++ GVR V+ S+YLIEPCG GKS+LT++CR+DL+GH PEWY+K FGHLCAAEV
Sbjct: 1036 HEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVA 1095
Query: 1510 KIRDSFSNQNTETKDTK 1526
+IR+SF E +TK
Sbjct: 1096 RIRNSFQPLIAEGPETK 1112
>gi|16445031 StAR-related lipid transfer (START) domain containing 13
isoform gamma [Homo sapiens]
Length = 995
Score = 999 bits (2583), Expect = 0.0
Identities = 558/1031 (54%), Positives = 721/1031 (69%), Gaps = 53/1031 (5%)
Query: 512 MKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGSPDDSH 571
MKL+++ RK+ DDSDE++ C IS KWTFQR S+RWSR+++ P+ D GSP +
Sbjct: 1 MKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDR-NGSPGGTG 58
Query: 572 PKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCSSSNLA 631
++ S L DLSE EV S+ S SS GS S + P + C + N
Sbjct: 59 MRNTTSSESVLTDLSE-PEVCSIHSESSGGS-DSRSQPGQ-------------CCTDNPV 103
Query: 632 GNDDSF--GSLPSP-KELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSKHKAPS 688
D SLP P +++ + F K +EK +++ +S LKRME+L+ K +H +HK
Sbjct: 104 MLDAPLVSSSLPQPPRDVLNHPFHPK-NEKPTRARAKSFLKRMETLRGKGAH-GRHKGSG 161
Query: 689 KLG-LIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVR-KRSVSNSTQTSSSSSQ 746
+ G L+ISGP+LQ+ + E K + C++I NG+ N P ++ + S ++S SS
Sbjct: 162 RTGGLVISGPMLQQ--EPESFKAMQCIQIP--NGDLQNSPPPACRKGLPCSGKSSGESSP 217
Query: 747 SE-TSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDT 805
SE +SS VSTP + R NKR GMYLE D + + +Q+ + E+
Sbjct: 218 SEHSSSGVSTPC--LKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENL 275
Query: 806 VFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKR 865
V +IP+DHKPGTFPKAL+ S SP+ ++ VNWRTGS ISL RE + + R
Sbjct: 276 VVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRTGS------ISLGREQVPGAREP--R 327
Query: 866 RNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSE 925
+S +SR+SIYDNVPGS LY+S+GDL DLE +D+FP LDDIL HV G+Q +V+ WS+
Sbjct: 328 LMASCHRASRVSIYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSK 387
Query: 926 KFSDEGDSDSAL---DSVSPCPSSPKQIHLD-----VDNDRTTPSDLDSTGNSLNEPEEP 977
E + L +S PS P QI LD V RTTPSD++ SLNE E P
Sbjct: 388 DVLPELQTHDTLVGEPGLSTFPS-PNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPP 446
Query: 978 SEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQKYSLL 1037
+ +RRDSGVGASLTR NR RLRW+SFQ SH+P S I+ Q+ +Q++LLQ++SLL
Sbjct: 447 G-VRDRRDSGVGASLTRPNR-RLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLL 504
Query: 1038 KLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQ 1097
+LTA++EK++ SNKHG++W+VPKFMKR+KVPDYKD++VFGVPL V+VQRTGQPLPQSIQQ
Sbjct: 505 RLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQ 564
Query: 1098 AMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDL 1157
A+RYLR++CLDQVGLFRKSGVKSRI ALRQMNE + VNYE QSAYDVADM+KQ+FRDL
Sbjct: 565 ALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDL 624
Query: 1158 PEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKE 1217
PEPL TNKLSETFL IYQYV K+QRLQA++AAI+LL DENREVLQTLL FL+DV V+E
Sbjct: 625 PEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEE 684
Query: 1218 NQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMI 1277
NQMTP NLAVCLAPSLFHLN LK+E SSPRV+Q+K + GKPDQKDLNENLAA QGLAHMI
Sbjct: 685 NQMTPMNLAVCLAPSLFHLNLLKKE-SSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMI 743
Query: 1278 AECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDGLFKEV 1336
EC +LF+VP E+ ++ RNSY E E+ TLE LG + A + +L + GL KE
Sbjct: 744 MECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEA 803
Query: 1337 KEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHLWDVDL 1396
KEKFKGWV+ S+++ +L++KKV +G PL+LW++ +EV A P +L R+L+E+HLWD D
Sbjct: 804 KEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDF 863
Query: 1397 LDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDRAPV 1456
+ KV+E LD QTEIYQYV NSMAPHP+RD+VVLRTW+T+LPKG C L+ SV+H+ A +
Sbjct: 864 VQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQL 923
Query: 1457 V-GVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSF 1515
+ GVR V+ S+YLIEPCG GKS+LT++CR+DL+GH PEWY+K FGHLCAAEV +IR+SF
Sbjct: 924 LGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSF 983
Query: 1516 SNQNTETKDTK 1526
E +TK
Sbjct: 984 QPLIAEGPETK 994
>gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens]
Length = 498
Score = 898 bits (2321), Expect = 0.0
Identities = 448/453 (98%), Positives = 452/453 (99%)
Query: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS
Sbjct: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
Query: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC
Sbjct: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
Query: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE
Sbjct: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
Query: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP
Sbjct: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
Query: 241 PKDENERSTCNVVQDEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
PKDENERSTCNVVQ+EFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS
Sbjct: 241 PKDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
Query: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM
Sbjct: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
Query: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST
Sbjct: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
Query: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAEIEA 453
DLPSSTPVANSGTKPKTTAIQGISEKEKA +++
Sbjct: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAAVKS 453
>gi|215820652 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 653 bits (1684), Expect = 0.0
Identities = 335/577 (58%), Positives = 430/577 (74%), Gaps = 15/577 (2%)
Query: 962 SDLDSTGNSLNEPEEPSEIP--------ERRDSGVGASLTRSNRHRLRWHSFQSSHRPSL 1013
S+LDS+GNS+NE E + ERRDSGVGASLTR R +LRWHSFQ+SHRPSL
Sbjct: 449 SELDSSGNSMNEAEAAGPLAGLQASMPRERRDSGVGASLTRPCR-KLRWHSFQNSHRPSL 507
Query: 1014 NSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDR 1073
NS SL+IN Q Q+NLL K SLL+LTA +EKYT +K G+ W++PKFM+R K PDY+ +
Sbjct: 508 NSESLEINRQFAGQINLLHKGSLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNKTPDYRGQ 567
Query: 1074 SVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI 1133
VFGVP ++VQRTGQPLPQSIQQAMRYLR+ CLDQVG+FRKSGVKSRIQ LRQMNE +
Sbjct: 568 HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSP 627
Query: 1134 DCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLL 1193
D V YEGQSAYDVAD+LKQYFRDLPEP+ T+KL+ TFLQIYQ +PKDQ L A +AA +LL
Sbjct: 628 DNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLL 687
Query: 1194 PDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQ 1253
PDENREVLQTLLYFLSD+ A+ +ENQMT NLAVCLAPS+FHLN K+++ SPR+ ++
Sbjct: 688 PDENREVLQTLLYFLSDI-ASAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRS 746
Query: 1254 SLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGH 1312
+G+P +DL++N+AATQGL+HMI++CKKLFQVP++M + +SY+ EL P AL
Sbjct: 747 LIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVPQDMVLQLCSSYSAAELSP-PGPALAE 805
Query: 1313 LGNDDSA--DYQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRS 1370
L +A ++++ + L ++ E+FKGW+S + EL+ +K +G PLRLW++
Sbjct: 806 LRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKA 865
Query: 1371 VIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVL 1430
EV A P +L R+L+E+ LWD DLL ++V+E L E+Y YV +SMAPHP RD+VVL
Sbjct: 866 STEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVL 925
Query: 1431 RTWRTNLPKGACALLLTSVDHDR-APVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLR 1489
R WR++LP+G C L+ S+D ++ P GVR +L S+YL+EPCG G+S+LT++CR DLR
Sbjct: 926 RMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALMLTSQYLMEPCGLGRSRLTHICRADLR 985
Query: 1490 GHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTK 1526
G P+WY K FGHLCA EV KIRDSF +TK
Sbjct: 986 GRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPETK 1022
Score = 69.7 bits (169), Expect = 2e-11
Identities = 60/187 (32%), Positives = 82/187 (43%), Gaps = 43/187 (22%)
Query: 505 TLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVP 564
TLN CA MKLE+ K+++DS+E+E C IS W FQ++SK WS + D+ +P
Sbjct: 2 TLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAP------ 55
Query: 565 GSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLP--SHAPPSEDAATPRTNSVI 622
PSPG L SV + S SLP + + P E A P
Sbjct: 56 -----------PSPG-----LPATSSCESVLTELSATSLPVITVSLPPEPADLP------ 93
Query: 623 SVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKS--KTRSLLKRMESLKLKSSH 680
L G S S + L S + +G + AK + RS LK +ESL+ K
Sbjct: 94 -------LPGRAPS----SSDRPLLSPTQGQEGPQDKAKKRHRNRSFLKHLESLRRKEKS 142
Query: 681 HSKHKAP 687
S+ P
Sbjct: 143 GSQQAEP 149
Score = 65.9 bits (159), Expect = 3e-10
Identities = 59/217 (27%), Positives = 85/217 (39%), Gaps = 45/217 (20%)
Query: 742 SSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESY 801
S S Q+E + +T V++ S +C G GF + R+++
Sbjct: 142 SGSQQAEPKHSPATSEKVSKASSFRSCR---GFLSAGFYRAKNWAATSAGGSGANTRKAW 198
Query: 802 PE---------------DTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGP 846
D + ++P DHKPGTFP++L+ S P + +W+ G
Sbjct: 199 EAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCPEDGHRLADWQPG----- 253
Query: 847 GHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENED----- 901
RR RR S S S S YDN+P LY + + E ED
Sbjct: 254 -----RRWGCEG------RRGSCGSTGSHASTYDNLPE--LYPAEPVMVGAEAEDEDDEE 300
Query: 902 ---IFPELDDILYHVKGMQRIVNQWSE-KFSDEGDSD 934
+ LDDIL HV G+Q+ V WS + D G D
Sbjct: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
>gi|215820650 StAR-related lipid transfer (START) domain containing 8
isoform a [Homo sapiens]
Length = 1103
Score = 653 bits (1684), Expect = 0.0
Identities = 335/577 (58%), Positives = 430/577 (74%), Gaps = 15/577 (2%)
Query: 962 SDLDSTGNSLNEPEEPSEIP--------ERRDSGVGASLTRSNRHRLRWHSFQSSHRPSL 1013
S+LDS+GNS+NE E + ERRDSGVGASLTR R +LRWHSFQ+SHRPSL
Sbjct: 529 SELDSSGNSMNEAEAAGPLAGLQASMPRERRDSGVGASLTRPCR-KLRWHSFQNSHRPSL 587
Query: 1014 NSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDR 1073
NS SL+IN Q Q+NLL K SLL+LTA +EKYT +K G+ W++PKFM+R K PDY+ +
Sbjct: 588 NSESLEINRQFAGQINLLHKGSLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNKTPDYRGQ 647
Query: 1074 SVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI 1133
VFGVP ++VQRTGQPLPQSIQQAMRYLR+ CLDQVG+FRKSGVKSRIQ LRQMNE +
Sbjct: 648 HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSP 707
Query: 1134 DCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLL 1193
D V YEGQSAYDVAD+LKQYFRDLPEP+ T+KL+ TFLQIYQ +PKDQ L A +AA +LL
Sbjct: 708 DNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLL 767
Query: 1194 PDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQ 1253
PDENREVLQTLLYFLSD+ A+ +ENQMT NLAVCLAPS+FHLN K+++ SPR+ ++
Sbjct: 768 PDENREVLQTLLYFLSDI-ASAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRS 826
Query: 1254 SLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGH 1312
+G+P +DL++N+AATQGL+HMI++CKKLFQVP++M + +SY+ EL P AL
Sbjct: 827 LIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVPQDMVLQLCSSYSAAELSP-PGPALAE 885
Query: 1313 LGNDDSA--DYQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRS 1370
L +A ++++ + L ++ E+FKGW+S + EL+ +K +G PLRLW++
Sbjct: 886 LRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKA 945
Query: 1371 VIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVL 1430
EV A P +L R+L+E+ LWD DLL ++V+E L E+Y YV +SMAPHP RD+VVL
Sbjct: 946 STEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVL 1005
Query: 1431 RTWRTNLPKGACALLLTSVDHDR-APVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLR 1489
R WR++LP+G C L+ S+D ++ P GVR +L S+YL+EPCG G+S+LT++CR DLR
Sbjct: 1006 RMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALMLTSQYLMEPCGLGRSRLTHICRADLR 1065
Query: 1490 GHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTK 1526
G P+WY K FGHLCA EV KIRDSF +TK
Sbjct: 1066 GRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPETK 1102
Score = 149 bits (375), Expect = 3e-35
Identities = 97/246 (39%), Positives = 128/246 (52%), Gaps = 43/246 (17%)
Query: 446 KEKAEIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNT 505
K+ AE EAK AC+WL+ATGFPQY QL+E+ FP+DI VK+ H FLD D++ ALCRRL T
Sbjct: 23 KKNAEAEAKRACEWLQATGFPQYVQLFEEGSFPLDIGSVKKNHGFLDEDSLGALCRRLMT 82
Query: 506 LNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPG 565
LN CA MKLE+ K+++DS+E+E C IS W FQ++SK WS + D+ +P
Sbjct: 83 LNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAP------- 135
Query: 566 SPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLP--SHAPPSEDAATPRTNSVIS 623
PSPG L SV + S SLP + + P E A P
Sbjct: 136 ----------PSPG-----LPATSSCESVLTELSATSLPVITVSLPPEPADLP------- 173
Query: 624 VCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKS--KTRSLLKRMESLKLKSSHH 681
L G S S + L S + +G + AK + RS LK +ESL+ K
Sbjct: 174 ------LPGRAPS----SSDRPLLSPTQGQEGPQDKAKKRHRNRSFLKHLESLRRKEKSG 223
Query: 682 SKHKAP 687
S+ P
Sbjct: 224 SQQAEP 229
Score = 65.9 bits (159), Expect = 3e-10
Identities = 59/217 (27%), Positives = 85/217 (39%), Gaps = 45/217 (20%)
Query: 742 SSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESY 801
S S Q+E + +T V++ S +C G GF + R+++
Sbjct: 222 SGSQQAEPKHSPATSEKVSKASSFRSCR---GFLSAGFYRAKNWAATSAGGSGANTRKAW 278
Query: 802 PE---------------DTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGP 846
D + ++P DHKPGTFP++L+ S P + +W+ G
Sbjct: 279 EAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCPEDGHRLADWQPG----- 333
Query: 847 GHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENED----- 901
RR RR S S S S YDN+P LY + + E ED
Sbjct: 334 -----RRWGCEG------RRGSCGSTGSHASTYDNLPE--LYPAEPVMVGAEAEDEDDEE 380
Query: 902 ---IFPELDDILYHVKGMQRIVNQWSE-KFSDEGDSD 934
+ LDDIL HV G+Q+ V WS + D G D
Sbjct: 381 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 417
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 653 bits (1684), Expect = 0.0
Identities = 335/577 (58%), Positives = 430/577 (74%), Gaps = 15/577 (2%)
Query: 962 SDLDSTGNSLNEPEEPSEIP--------ERRDSGVGASLTRSNRHRLRWHSFQSSHRPSL 1013
S+LDS+GNS+NE E + ERRDSGVGASLTR R +LRWHSFQ+SHRPSL
Sbjct: 449 SELDSSGNSMNEAEAAGPLAGLQASMPRERRDSGVGASLTRPCR-KLRWHSFQNSHRPSL 507
Query: 1014 NSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDR 1073
NS SL+IN Q Q+NLL K SLL+LTA +EKYT +K G+ W++PKFM+R K PDY+ +
Sbjct: 508 NSESLEINRQFAGQINLLHKGSLLRLTAFMEKYTVPHKQGWVWSMPKFMRRNKTPDYRGQ 567
Query: 1074 SVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI 1133
VFGVP ++VQRTGQPLPQSIQQAMRYLR+ CLDQVG+FRKSGVKSRIQ LRQMNE +
Sbjct: 568 HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSP 627
Query: 1134 DCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLL 1193
D V YEGQSAYDVAD+LKQYFRDLPEP+ T+KL+ TFLQIYQ +PKDQ L A +AA +LL
Sbjct: 628 DNVCYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLL 687
Query: 1194 PDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQ 1253
PDENREVLQTLLYFLSD+ A+ +ENQMT NLAVCLAPS+FHLN K+++ SPR+ ++
Sbjct: 688 PDENREVLQTLLYFLSDI-ASAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRS 746
Query: 1254 SLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGH 1312
+G+P +DL++N+AATQGL+HMI++CKKLFQVP++M + +SY+ EL P AL
Sbjct: 747 LIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVPQDMVLQLCSSYSAAELSP-PGPALAE 805
Query: 1313 LGNDDSA--DYQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRS 1370
L +A ++++ + L ++ E+FKGW+S + EL+ +K +G PLRLW++
Sbjct: 806 LRQAQAAGVSLSLYMEENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKA 865
Query: 1371 VIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVL 1430
EV A P +L R+L+E+ LWD DLL ++V+E L E+Y YV +SMAPHP RD+VVL
Sbjct: 866 STEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVL 925
Query: 1431 RTWRTNLPKGACALLLTSVDHDR-APVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLR 1489
R WR++LP+G C L+ S+D ++ P GVR +L S+YL+EPCG G+S+LT++CR DLR
Sbjct: 926 RMWRSDLPRGGCLLVSQSLDPEQPVPESGVRALMLTSQYLMEPCGLGRSRLTHICRADLR 985
Query: 1490 GHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTK 1526
G P+WY K FGHLCA EV KIRDSF +TK
Sbjct: 986 GRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPETK 1022
Score = 69.7 bits (169), Expect = 2e-11
Identities = 60/187 (32%), Positives = 82/187 (43%), Gaps = 43/187 (22%)
Query: 505 TLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVP 564
TLN CA MKLE+ K+++DS+E+E C IS W FQ++SK WS + D+ +P
Sbjct: 2 TLNNCASMKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAP------ 55
Query: 565 GSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLP--SHAPPSEDAATPRTNSVI 622
PSPG L SV + S SLP + + P E A P
Sbjct: 56 -----------PSPG-----LPATSSCESVLTELSATSLPVITVSLPPEPADLP------ 93
Query: 623 SVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKS--KTRSLLKRMESLKLKSSH 680
L G S S + L S + +G + AK + RS LK +ESL+ K
Sbjct: 94 -------LPGRAPS----SSDRPLLSPTQGQEGPQDKAKKRHRNRSFLKHLESLRRKEKS 142
Query: 681 HSKHKAP 687
S+ P
Sbjct: 143 GSQQAEP 149
Score = 65.9 bits (159), Expect = 3e-10
Identities = 59/217 (27%), Positives = 85/217 (39%), Gaps = 45/217 (20%)
Query: 742 SSSSQSETSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESY 801
S S Q+E + +T V++ S +C G GF + R+++
Sbjct: 142 SGSQQAEPKHSPATSEKVSKASSFRSCR---GFLSAGFYRAKNWAATSAGGSGANTRKAW 198
Query: 802 PE---------------DTVFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGP 846
D + ++P DHKPGTFP++L+ S P + +W+ G
Sbjct: 199 EAWPVASFRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCPEDGHRLADWQPG----- 253
Query: 847 GHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENED----- 901
RR RR S S S S YDN+P LY + + E ED
Sbjct: 254 -----RRWGCEG------RRGSCGSTGSHASTYDNLPE--LYPAEPVMVGAEAEDEDDEE 300
Query: 902 ---IFPELDDILYHVKGMQRIVNQWSE-KFSDEGDSD 934
+ LDDIL HV G+Q+ V WS + D G D
Sbjct: 301 SGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
>gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]
Length = 663
Score = 99.4 bits (246), Expect = 2e-20
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 8/195 (4%)
Query: 1060 KFMKRIKVPDYKDRSVFGVPLTVNVQRT-----GQPLPQSIQQAMRYLRNHCLDQVGLFR 1114
K K +K+ KD +F VPLT +++ G +P Q+ + + L+ GL R
Sbjct: 307 KQQKAVKIKT-KDSGLFCVPLTALLEQDQRKVPGMRIPLIFQKLISRIEERGLETEGLLR 365
Query: 1115 KSGVKSRIQALRQMNEGAI--DCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQ 1172
G RI+ L Q E N+E +D A +LK + R+LP+PL++ + + F
Sbjct: 366 IPGAAIRIKNLCQELEAKFYEGTFNWESVKQHDAASLLKLFIRELPQPLLSVEYLKAFQA 425
Query: 1173 IYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPS 1232
+ K Q+LQA+ ++LLPD NR+ L+ LL FL V ++N+MT N+A+ +AP+
Sbjct: 426 VQNLPTKKQQLQALNLLVILLPDANRDTLKALLEFLQRVIDNKEKNKMTVMNVAMVMAPN 485
Query: 1233 LFHLNTLKRENSSPR 1247
LF + L ++S R
Sbjct: 486 LFMCHALGLKSSEQR 500
>gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens]
Length = 771
Score = 91.7 bits (226), Expect = 5e-18
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 1091 LPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADML 1150
+P+ + ++L H L VG+FR K R++ LR+ + ID E S +DVA +L
Sbjct: 207 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVHDVAALL 266
Query: 1151 KQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSD 1210
K++ RD+P+PL+T +L F+ P++Q L ++ I LLP N + L LL FLS
Sbjct: 267 KEFLRDMPDPLLTRELYTAFINTLLLEPEEQ-LGTLQLLIYLLPPCNCDTLHRLLQFLSI 325
Query: 1211 VT-----------AAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPD 1259
V V N+MT NLA P+L H ++ SS + + S
Sbjct: 326 VARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLH-----KQKSSDKEFSVQSS----- 375
Query: 1260 QKDLNENLAATQGLAHMIAECKKLFQVPEEM 1290
E+ A + MI + LF VP ++
Sbjct: 376 -ARAEESTAIIAVVQKMIENYEALFMVPPDL 405
>gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo sapiens]
Length = 765
Score = 91.7 bits (226), Expect = 5e-18
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 1091 LPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADML 1150
+P+ + ++L H L VG+FR K R++ LR+ + ID E S +DVA +L
Sbjct: 410 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVHDVAALL 469
Query: 1151 KQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSD 1210
K++ RD+P+PL+T +L F+ P++Q L ++ I LLP N + L LL FLS
Sbjct: 470 KEFLRDMPDPLLTRELYTAFINTLLLEPEEQ-LGTLQLLIYLLPPCNCDTLHRLLQFLSI 528
Query: 1211 VT-----------AAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPD 1259
V V N+MT NLA P+L H ++ SS + + S
Sbjct: 529 VARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLH-----KQKSSDKEFSVQSS----- 578
Query: 1260 QKDLNENLAATQGLAHMIAECKKLFQVPEEM 1290
E+ A + MI + LF VP ++
Sbjct: 579 -ARAEESTAIIAVVQKMIENYEALFMVPPDL 608
>gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapiens]
Length = 974
Score = 91.7 bits (226), Expect = 5e-18
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 1091 LPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADML 1150
+P+ + ++L H L VG+FR K R++ LR+ + ID E S +DVA +L
Sbjct: 410 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVHDVAALL 469
Query: 1151 KQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSD 1210
K++ RD+P+PL+T +L F+ P++Q L ++ I LLP N + L LL FLS
Sbjct: 470 KEFLRDMPDPLLTRELYTAFINTLLLEPEEQ-LGTLQLLIYLLPPCNCDTLHRLLQFLSI 528
Query: 1211 VT-----------AAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPD 1259
V V N+MT NLA P+L H ++ SS + + S
Sbjct: 529 VARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLH-----KQKSSDKEFSVQSS----- 578
Query: 1260 QKDLNENLAATQGLAHMIAECKKLFQVPEEM 1290
E+ A + MI + LF VP ++
Sbjct: 579 -ARAEESTAIIAVVQKMIENYEALFMVPPDL 608
>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 88.2 bits (217), Expect = 6e-17
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 1024 SVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYK--DRSVFGVPLT 1081
S+ M + +L++LTAL + + +KR K +K + +FGVPL
Sbjct: 226 SLQDMRKVPSLALIELTALCD------------ILGLDLKRSKAGKWKAAETRLFGVPLD 273
Query: 1082 VNVQRTGQPLPQS-----IQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCV 1136
++ + LP + +Q + L LD G+ R G ++R++ L Q E
Sbjct: 274 SLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILRVPGSQARVKGLEQKLERDFYAG 333
Query: 1137 NYEGQSAY--DVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLP 1194
+ + D +D+LK++ R LP PL+T + F + QRLQ + I++LP
Sbjct: 334 LFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAVVPNIPNLKQRLQVLHLLILILP 393
Query: 1195 DENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLF 1234
+ NR L+ LL FL V A + N+MT N++ +AP+LF
Sbjct: 394 EPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPNLF 433
>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 88.2 bits (217), Expect = 6e-17
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 1024 SVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYK--DRSVFGVPLT 1081
S+ M + +L++LTAL + + +KR K +K + +FGVPL
Sbjct: 226 SLQDMRKVPSLALIELTALCD------------ILGLDLKRSKAGKWKAAETRLFGVPLD 273
Query: 1082 VNVQRTGQPLPQS-----IQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCV 1136
++ + LP + +Q + L LD G+ R G ++R++ L Q E
Sbjct: 274 SLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILRVPGSQARVKGLEQKLERDFYAG 333
Query: 1137 NYEGQSAY--DVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLP 1194
+ + D +D+LK++ R LP PL+T + F + QRLQ + I++LP
Sbjct: 334 LFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAVVPNIPNLKQRLQVLHLLILILP 393
Query: 1195 DENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLF 1234
+ NR L+ LL FL V A + N+MT N++ +AP+LF
Sbjct: 394 EPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPNLF 433
>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
sapiens]
Length = 622
Score = 88.2 bits (217), Expect = 6e-17
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 1024 SVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYK--DRSVFGVPLT 1081
S+ M + +L++LTAL + + +KR K +K + +FGVPL
Sbjct: 226 SLQDMRKVPSLALIELTALCD------------ILGLDLKRSKAGKWKAAETRLFGVPLD 273
Query: 1082 VNVQRTGQPLPQS-----IQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCV 1136
++ + LP + +Q + L LD G+ R G ++R++ L Q E
Sbjct: 274 SLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILRVPGSQARVKGLEQKLERDFYAG 333
Query: 1137 NYEGQSAY--DVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLP 1194
+ + D +D+LK++ R LP PL+T + F + QRLQ + I++LP
Sbjct: 334 LFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAVVPNIPNLKQRLQVLHLLILILP 393
Query: 1195 DENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLF 1234
+ NR L+ LL FL V A + N+MT N++ +AP+LF
Sbjct: 394 EPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPNLF 433
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 88.2 bits (217), Expect = 6e-17
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 23/201 (11%)
Query: 1038 KLTALLEKYTPSNK-HGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQ 1096
K A+LEK P + H WA ++ FG PL +++R+G+ + I+
Sbjct: 225 KALAVLEKTLPEMRAHQDKWA--------------EKPAFGTPLEEHLKRSGREIALPIE 270
Query: 1097 QAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYD----VADMLKQ 1152
+ L + + GLFR S+++ L+ A+DC Y VA LK
Sbjct: 271 ACVMLLLETGMKEEGLFRIGAGASKLKKLK----AALDCSTSHLDEFYSDPHAVAGALKS 326
Query: 1153 YFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVT 1212
Y R+LPEPLMT L E + Q+ +D++LQ + LP +N + L+ FL+ +
Sbjct: 327 YLRELPEPLMTFNLYEEWTQVASVQDQDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLA 386
Query: 1213 AAVKENQMTPTNLAVCLAPSL 1233
N+MTP+N+A+ L P+L
Sbjct: 387 QTSDVNKMTPSNIAIVLGPNL 407
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 88.2 bits (217), Expect = 6e-17
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 23/201 (11%)
Query: 1038 KLTALLEKYTPSNK-HGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQ 1096
K A+LEK P + H WA ++ FG PL +++R+G+ + I+
Sbjct: 225 KALAVLEKTLPEMRAHQDKWA--------------EKPAFGTPLEEHLKRSGREIALPIE 270
Query: 1097 QAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYD----VADMLKQ 1152
+ L + + GLFR S+++ L+ A+DC Y VA LK
Sbjct: 271 ACVMLLLETGMKEEGLFRIGAGASKLKKLK----AALDCSTSHLDEFYSDPHAVAGALKS 326
Query: 1153 YFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVT 1212
Y R+LPEPLMT L E + Q+ +D++LQ + LP +N + L+ FL+ +
Sbjct: 327 YLRELPEPLMTFNLYEEWTQVASVQDQDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLA 386
Query: 1213 AAVKENQMTPTNLAVCLAPSL 1233
N+MTP+N+A+ L P+L
Sbjct: 387 QTSDVNKMTPSNIAIVLGPNL 407
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 84.7 bits (208), Expect = 6e-16
Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 1072 DRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEG 1131
++ FG PL ++ +G+ + I+ + L + + GLFR + S+++ L+
Sbjct: 249 EKPSFGKPLEEHLTISGREIAFPIEACVTMLLECGMQEEGLFRVAPSASKLKKLK----A 304
Query: 1132 AIDC--VNYEGQSA--YDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIK 1187
A+DC V+ + SA + +A LK Y R+LPEPLMT +L + ++Q +D++LQA+
Sbjct: 305 ALDCCVVDVQEYSADPHAIAGALKSYLRELPEPLMTFELYDEWIQASNVQEQDKKLQALW 364
Query: 1188 AAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSL 1233
A LP N ++ L+ FLS ++ N+MTP+N+A+ L P+L
Sbjct: 365 NACEKLPKANHNNIRYLIKFLSKLSEYQDVNKMTPSNMAIVLGPNL 410
>gi|59710113 Rho GTPase activating protein 28 isoform a [Homo sapiens]
Length = 570
Score = 83.6 bits (205), Expect = 1e-15
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 1024 SVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVN 1083
S M ++ SL++LTA + + K K KV +D +FGVPLTV
Sbjct: 177 SAEDMKKIRHLSLIELTAFFDAFGIQLKRN---------KTEKVKG-RDNGIFGVPLTVL 226
Query: 1084 V-----QRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI--DCV 1136
+ + G +P +Q+ + L+ G+FR SG ++++ R+ + D
Sbjct: 227 LDGDRKKDPGVKVPLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKF 286
Query: 1137 NYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQ-RLQAIKAAIMLLPD 1195
++ + A MLK +FR+LP L + F+ + + P + + QA+ +M LPD
Sbjct: 287 KWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFISLMERGPHVKVQFQALHLMVMALPD 346
Query: 1196 ENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLF 1234
NR+ Q L+ F + V A +N+M+ N++ +AP+LF
Sbjct: 347 ANRDAAQALMTFFNKVIANESKNRMSLWNISTVMAPNLF 385
Score = 41.2 bits (95), Expect = 0.008
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 570 SHPKDGPSPGGTLMDLSERQEVS-------SVRSLSSTGSLPSHAPPSEDAATPRTNSVI 622
S P D TL D S+ +E S SV L + LP H+ S + P N++
Sbjct: 52 SMPDDASLNSTTLSDASQDKEGSFAVPRSDSVAILETIPVLPVHSNGSPEPGQPVQNAI- 110
Query: 623 SVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHS 682
+DD F P E SF + E ++ R+ LK+ E K
Sbjct: 111 ----------SDDDFLEKNIPPEAEELSFEVSYSEMVTEALKRNKLKKSEIKKEDYVLTK 160
Query: 683 KHKAPSKLGLIISGPILQEGMDEEKLKQLNCVEISA 718
+ ++ GL +G + E D +K++ L+ +E++A
Sbjct: 161 FNVQKTRFGLTEAGDLSAE--DMKKIRHLSLIELTA 194
>gi|59710111 Rho GTPase activating protein 28 isoform b [Homo sapiens]
Length = 563
Score = 83.6 bits (205), Expect = 1e-15
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 1024 SVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVN 1083
S M ++ SL++LTA + + K K KV +D +FGVPLTV
Sbjct: 177 SAEDMKKIRHLSLIELTAFFDAFGIQLKRN---------KTEKVKG-RDNGIFGVPLTVL 226
Query: 1084 V-----QRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI--DCV 1136
+ + G +P +Q+ + L+ G+FR SG ++++ R+ + D
Sbjct: 227 LDGDRKKDPGVKVPLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKF 286
Query: 1137 NYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQ-RLQAIKAAIMLLPD 1195
++ + A MLK +FR+LP L + F+ + + P + + QA+ +M LPD
Sbjct: 287 KWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFISLMERGPHVKVQFQALHLMVMALPD 346
Query: 1196 ENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLF 1234
NR+ Q L+ F + V A +N+M+ N++ +AP+LF
Sbjct: 347 ANRDAAQALMTFFNKVIANESKNRMSLWNISTVMAPNLF 385
Score = 41.2 bits (95), Expect = 0.008
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 570 SHPKDGPSPGGTLMDLSERQEVS-------SVRSLSSTGSLPSHAPPSEDAATPRTNSVI 622
S P D TL D S+ +E S SV L + LP H+ S + P N++
Sbjct: 52 SMPDDASLNSTTLSDASQDKEGSFAVPRSDSVAILETIPVLPVHSNGSPEPGQPVQNAI- 110
Query: 623 SVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHS 682
+DD F P E SF + E ++ R+ LK+ E K
Sbjct: 111 ----------SDDDFLEKNIPPEAEELSFEVSYSEMVTEALKRNKLKKSEIKKEDYVLTK 160
Query: 683 KHKAPSKLGLIISGPILQEGMDEEKLKQLNCVEISA 718
+ ++ GL +G + E D +K++ L+ +E++A
Sbjct: 161 FNVQKTRFGLTEAGDLSAE--DMKKIRHLSLIELTA 194
>gi|40255080 hypothetical protein LOC158763 [Homo sapiens]
Length = 547
Score = 83.2 bits (204), Expect = 2e-15
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 1075 VFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAID 1134
+ G +++ + +PQ ++ +++ H L VG+F R++ LR+ + +D
Sbjct: 219 LLGSKRKMSLNPIAKQIPQVVEACCQFIEKHGLSAVGIFTLEYSVQRVRQLREEFDQGLD 278
Query: 1135 CVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLP 1194
V + Q+ +DVA +LK++FRD+ + L+ + L +FL P+DQ L A++ + L+P
Sbjct: 279 VVLDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKPQDQ-LSALQLLVYLMP 337
Query: 1195 DENREVLQTLLYFLSDVT-----------AAVKENQMTPTNLAVCLAPSLFHLNTLKREN 1243
+ + L+ LL L +T V N+MT TNLA+ +L +
Sbjct: 338 PCHSDTLERLLKALHKITENCEDSIGIDGQLVPGNRMTSTNLALVFGSALLKKGKFGKRE 397
Query: 1244 SSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEMSR 1292
S RK LG ++ +A+ + MI LFQVP + R
Sbjct: 398 S------RKTKLG------IDHYVASVNVVRAMIDNWDVLFQVPPHIQR 434
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 83.2 bits (204), Expect = 2e-15
Identities = 50/159 (31%), Positives = 83/159 (52%)
Query: 1075 VFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAID 1134
V+GV L ++Q G+ + I+ + L + + + GLFR + S ++ L+Q
Sbjct: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332
Query: 1135 CVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLP 1194
+ + VA LK Y R+LPEPLMT L + +++ RLQA++ LP
Sbjct: 333 SLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSRLP 392
Query: 1195 DENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSL 1233
EN L+ L+ FL+ + + N+MTP+N+A+ L P+L
Sbjct: 393 PENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNL 431
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 82.8 bits (203), Expect = 2e-15
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 1074 SVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI 1133
S FG LT ++ +GQ +P ++ ++ H + G++R SGV S IQ LRQ G+
Sbjct: 17 SAFGCDLTEYLESSGQDVPYVLKSCAEFIETHGIVD-GIYRLSGVTSNIQRLRQ-EFGSD 74
Query: 1134 DCVNYEG----QSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAA 1189
C + Q + V + K YFR+LP PL+T +L E F + + P++ +L I+
Sbjct: 75 QCPDLTREVYLQDIHCVGSLCKLYFRELPNPLLTYELYEKFTEAVSHCPEEGQLARIQNV 134
Query: 1190 IMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSL 1233
I LP + L+ L+ L+ + + + M NLA+ AP+L
Sbjct: 135 IQELPPSHYRTLEYLIRHLAHIASFSSKTNMHARNLALVWAPNL 178
Score = 31.2 bits (69), Expect = 8.0
Identities = 19/91 (20%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 369 IENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTPV 428
+ +ST+S+P TP + + LE S G+++ + L ++T + +P +
Sbjct: 498 VSAVISTNSTPCRTPPKELQSLSSLEEFSFHGSESGGWPEEEKPLGAETSAASVPKKAGL 557
Query: 429 ANSGTKPKTTAI----QGISEKEKAEIEAKE 455
++ P+ +G+S++ A +E K+
Sbjct: 558 EDAKAVPEAPGTVECSKGLSQEPGAHLEEKK 588
>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
sapiens]
Length = 1499
Score = 82.0 bits (201), Expect = 4e-15
Identities = 49/163 (30%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 1072 DRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQAL-RQMNE 1130
+ + FGVPLT V +P+P I++ + Y+ L G++R SG KS +++L RQ ++
Sbjct: 1243 ESNYFGVPLTT-VVTPEKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQ 1301
Query: 1131 GAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAI 1190
+ + + VA +K +F +LP+PL+ + ++ ++ ++Q+L A+K +
Sbjct: 1302 DHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVL 1361
Query: 1191 MLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSL 1233
P EN EV + ++ L+ V+ K N MT NL++C P+L
Sbjct: 1362 KKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTL 1404
>gi|5803145 ralA binding protein 1 [Homo sapiens]
Length = 655
Score = 82.0 bits (201), Expect = 4e-15
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 1064 RIKVPDYKDRSVFGVPLTVNVQRT----GQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVK 1119
+I VP+ K +FG+PL V+RT G LP ++ + Y+ + + G++R SG+K
Sbjct: 180 QIDVPNLKP--IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIK 237
Query: 1120 SRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPK 1179
S++ L+ + + N E VA +LKQY RDLPE L+T +L F + +
Sbjct: 238 SKVDELKAAYDRE-ESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTE 296
Query: 1180 DQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSL 1233
+++Q + + LP+ N ++ L+ + V A E +M N+++ L+P++
Sbjct: 297 TEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 82.0 bits (201), Expect = 4e-15
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 1091 LPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADML 1150
+P +++ + ++ H L GL+RKSG +R + LRQ + V E + + +L
Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771
Query: 1151 KQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSD 1210
KQ+ R+LPEPLMT FL+ + K ++L AI A + LP+ N L+ L++ L
Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831
Query: 1211 VTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSP 1246
V N+M+P LA+ AP L +NS P
Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCLLRC----PDNSDP 1863
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 82.0 bits (201), Expect = 4e-15
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 1091 LPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADML 1150
+P +++ + ++ H L GL+RKSG +R + LRQ + V E + + +L
Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771
Query: 1151 KQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSD 1210
KQ+ R+LPEPLMT FL+ + K ++L AI A + LP+ N L+ L++ L
Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831
Query: 1211 VTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSP 1246
V N+M+P LA+ AP L +NS P
Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCLLRC----PDNSDP 1863
>gi|156071465 Rho GTPase activating protein 4 [Homo sapiens]
Length = 946
Score = 81.6 bits (200), Expect = 5e-15
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 1072 DRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEG 1131
++ +FG + +Q +GQP+P ++ +R++ + L G+FR SG + R+ +R E
Sbjct: 501 NQRLFGGDMEKFIQSSGQPVPLVVESCIRFINLNGLQHEGIFRVSGAQLRVSEIRDAFER 560
Query: 1132 AIDCVNYEGQSAYD---VADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKA 1188
D + EG +A+D VA +LK YFR L PL L L + +R++ +
Sbjct: 561 GEDPL-VEGCTAHDLDSVAGVLKLYFRSLEPPLFPPDLFGELLASSELEATAERVEHVSR 619
Query: 1189 AIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSL 1233
+ LP VL+ L FL+ + EN M P NLAVC P+L
Sbjct: 620 LLWRLPAPVLVVLRYLFTFLNHLAQYSDENMMDPYNLAVCFGPTL 664
>gi|26986534 Rho GTPase activating protein 12 [Homo sapiens]
Length = 846
Score = 79.3 bits (194), Expect = 3e-14
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 1031 LQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQP 1090
L+ + + + + +K T N F P ++ ++ Y VFG L QR
Sbjct: 610 LRSFKVSSIDSSEQKKTKKNLKKFLTRRPT-LQAVREKGYIKDQVFGSNLANLCQRENGT 668
Query: 1091 LPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQM--NEGAIDCVNYEGQSAYDVAD 1148
+P+ ++ + ++ H LD G++R SG + IQ LR ++ +D + + + + +
Sbjct: 669 VPKFVKLCIEHVEEHGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITG 728
Query: 1149 MLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFL 1208
LK +FR+LPEPL T F+ + P+ QR+ A+K I LP N++ +Q L L
Sbjct: 729 ALKMFFRELPEPLFTFNHFNDFVNAIKQEPR-QRVAAVKDLIRQLPKPNQDTMQILFRHL 787
Query: 1209 SDVTAAVKENQMTPTNLAVCLAPSL 1233
V ++N+MT ++A+ P+L
Sbjct: 788 RRVIENGEKNRMTYQSIAIVFGPTL 812
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,012,689
Number of Sequences: 37866
Number of extensions: 2930875
Number of successful extensions: 9995
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 9333
Number of HSP's gapped (non-prelim): 650
length of query: 1528
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1413
effective length of database: 13,892,928
effective search space: 19630707264
effective search space used: 19630707264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.