SEPSECS 15678

Name: SEPSECS	Sequence: fasta or formatted (500aa)		NCBI GI: 228480284
Description: Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase isoform 3		Referenced in: Liver Selenium Proteins
Other entries for this name: alt prot [501aa] Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase iso... alt prot [422aa] Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase iso...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 36 2 C cysteine 2.8 14 1 D aspartate 6.0 30 2 E glutamate 5.0 25 2 F phenylalanine 3.8 19 1 G glycine 6.4 32 2 H histidine 2.6 13 1 I isoleucine 5.8 29 2 K lysine 5.8 29 2 L leucine 10.6 53 2 M methionine 3.2 16 1 N asparagine 4.4 22 2 P proline 5.4 27 4 Q glutamine 3.2 16 2 R arginine 5.4 27 2 S serine 8.2 41 2 T threonine 4.4 22 2 V valine 6.4 32 2 W tryptophan 0.6 3 1 Y tyrosine 2.8 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN... SEPSECS 0.914 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN... SEPSECS 0.805 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN... LOC100128682 0.045 PREDICTED: hypothetical protein LOC100128682 LOC100128682 0.045 PREDICTED: hypothetical protein LOC100128682 LOC100128682 0.045 PREDICTED: hypothetical protein LOC100128682 LOC100128260 0.033 PREDICTED: hCG_1742852 LOC100128260 0.033 PREDICTED: hCG_1742852 C16orf89 0.032 hypothetical protein LOC146556 isoform 1 LOC100288773 0.030 PREDICTED: hypothetical protein XP_002343911 LOC100128260 0.030 PREDICTED: hCG_1742852 UTY 0.030 tetratricopeptide repeat protein isoform 1 ZNF283 0.026 zinc finger protein 283 MAP3K15 0.022 mitogen-activated protein kinase kinase kinase 15 [... ECD 0.022 suppressor of S. cerevisiae gcr2 isoform 2 BEND2 0.019 BEN domain containing 2 ITGB1 0.016 integrin beta 1 isoform 1C-1 precursor ITGB1 0.016 integrin beta 1 isoform 1C-2 precursor PPIL3 0.016 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... LOC100292686 0.013 PREDICTED: hypothetical protein LOC100287098 0.013 PREDICTED: hypothetical protein LOC100287098 0.013 PREDICTED: hypothetical protein XP_002342923 PPP1R14D 0.011 protein phosphatase 1, regulatory subunit 14D isofo... CCDC110 0.010 coiled-coil domain containing 110 isoform b CCDC110 0.010 coiled-coil domain containing 110 isoform a CSF2RA 0.010 colony stimulating factor 2 receptor alpha chain is... ZNF573 0.009 zinc finger protein 573 IFNAR2 0.007 interferon alpha/beta receptor 2 isoform b precursor... IFNAR2 0.007 interferon alpha/beta receptor 2 isoform b precursor... LOC100287104 0.007 PREDICTED: hypothetical protein XP_002343630 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.