FAM48A 37706

Name: FAM48A	Sequence: fasta or formatted (779aa)		NCBI GI: 98961135
Description: family with sequence similarity 48, member A isoform a		Not currently referenced in the text
Other entries for this name: alt prot {733aa} family with sequence similarity 48, member A isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 50 5 C cysteine 2.2 17 1 D aspartate 3.6 28 2 E glutamate 5.3 41 2 F phenylalanine 2.2 17 1 G glycine 5.4 42 2 H histidine 2.1 16 3 I isoleucine 3.5 27 2 K lysine 6.0 47 2 L leucine 10.5 82 3 M methionine 2.4 19 1 N asparagine 4.1 32 1 P proline 7.1 55 4 Q glutamine 9.9 77 6 R arginine 4.2 33 2 S serine 12.2 95 3 T threonine 5.0 39 2 V valine 4.9 38 2 W tryptophan 0.5 4 1 Y tyrosine 2.6 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 family with sequence similarity 48, member A isoform... FAM48A 0.898 family with sequence similarity 48, member A isoform ... FAM48B2 0.461 family with sequence similarity 48, member B2 [Homo... FAM48B1 0.460 hypothetical protein LOC100130302 LOC100294444 0.410 PREDICTED: similar to family with sequence similari... ZFHX3 0.018 AT-binding transcription factor 1 MAML2 0.016 mastermind-like 2 MED15 0.016 mediator complex subunit 15 isoform a MED15 0.016 mediator complex subunit 15 isoform b EP400 0.016 E1A binding protein p400 MUC6 0.016 mucin 6, gastric BPTF 0.014 bromodomain PHD finger transcription factor isoform ... PAXIP1 0.013 PAX interacting protein 1 TNRC18 0.013 trinucleotide repeat containing 18 AAK1 0.013 AP2 associated kinase 1 MED12 0.012 mediator complex subunit 12 ARID1A 0.012 AT rich interactive domain 1A isoform a ARID1A 0.012 AT rich interactive domain 1A isoform b TFG 0.012 TRK-fused TFG 0.012 TRK-fused NFAT5 0.012 nuclear factor of activated T-cells 5 isoform a [Hom... NFAT5 0.012 nuclear factor of activated T-cells 5 isoform c [Homo... NFAT5 0.012 nuclear factor of activated T-cells 5 isoform d [Ho... NFAT5 0.012 nuclear factor of activated T-cells 5 isoform b [Ho... NFAT5 0.012 nuclear factor of activated T-cells 5 isoform a [Hom... ZNF532 0.012 zinc finger protein 532 MEF2A 0.012 myocyte enhancer factor 2A isoform 4 MEF2A 0.012 myocyte enhancer factor 2A isoform 2 MEF2A 0.012 myocyte enhancer factor 2A isoform 1 ZNF853 0.012 zinc finger protein 853 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.