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Search of human proteins with 32698954
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698954 hypothetical protein LOC283991 [Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698954 hypothetical protein LOC283991 [Homo sapiens] 350 2e-97
gi|21687062 hypothetical protein LOC124402 [Homo sapiens] 207 3e-54
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 38 0.004
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.008
gi|163965366 nascent polypeptide-associated complex alpha subuni... 36 0.013
gi|151301154 mucin 6, gastric [Homo sapiens] 35 0.022
gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens] 35 0.022
gi|56550057 CCR4-NOT transcription complex, subunit 4 isoform a ... 35 0.029
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 34 0.050
gi|55750053 atrophin-1 [Homo sapiens] 34 0.065
gi|55750041 atrophin-1 [Homo sapiens] 34 0.065
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 34 0.065
gi|116284392 mucin 2 precursor [Homo sapiens] 33 0.085
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 33 0.11
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 33 0.11
gi|40068065 hypothetical protein LOC54058 [Homo sapiens] 33 0.11
gi|4505619 paired box 7 isoform 1 [Homo sapiens] 33 0.14
gi|7524359 paired box 7 isoform 2 [Homo sapiens] 33 0.14
gi|207029223 paired box 7 isoform 3 [Homo sapiens] 33 0.14
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 33 0.14
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 33 0.14
gi|29568099 p47 protein isoform b [Homo sapiens] 33 0.14
gi|20149635 p47 protein isoform a [Homo sapiens] 33 0.14
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 33 0.14
gi|210032580 SET domain containing 1B [Homo sapiens] 33 0.14
gi|169171448 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
gi|239751824 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
gi|169171883 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
gi|239746315 PREDICTED: hypothetical protein XP_002343693 [Homo ... 32 0.19
gi|169171116 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
>gi|32698954 hypothetical protein LOC283991 [Homo sapiens]
Length = 164
Score = 350 bits (899), Expect = 2e-97
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MSVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNIPNSHHHHQ 60
MSVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNIPNSHHHHQ
Sbjct: 1 MSVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNIPNSHHHHQ 60
Query: 61 MMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSH 120
MMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSH
Sbjct: 61 MMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSH 120
Query: 121 QAPWIPPSSPTTFHHLHRPQPTWPPGAQQGGAQQKAMAAMDGQR 164
QAPWIPPSSPTTFHHLHRPQPTWPPGAQQGGAQQKAMAAMDGQR
Sbjct: 121 QAPWIPPSSPTTFHHLHRPQPTWPPGAQQGGAQQKAMAAMDGQR 164
>gi|21687062 hypothetical protein LOC124402 [Homo sapiens]
Length = 177
Score = 207 bits (528), Expect = 3e-54
Identities = 111/179 (62%), Positives = 126/179 (70%), Gaps = 17/179 (9%)
Query: 1 MSVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNIPNSHHHHQ 60
MSVNMDEL+HQVMINQFVL AGCAADQAKQLLQAAHWQFETALS FFQETNIP SHHHHQ
Sbjct: 1 MSVNMDELKHQVMINQFVLTAGCAADQAKQLLQAAHWQFETALSAFFQETNIPYSHHHHQ 60
Query: 61 MMCTPSNTPATPPNFPDALAMFSKLRASEGLQS--SNSPMTAAACSPPANFSPFWASSPP 118
MMCTP+NTPATPPNFPDAL MFS+L+ASE S S SPM A A SPP +F A++
Sbjct: 61 MMCTPANTPATPPNFPDALTMFSRLKASESFHSGGSGSPMAATATSPPPHFP--HAATSS 118
Query: 119 SHQAPWIPPSSPTTFHHLHRPQP------------TWPPGA-QQGGAQQKAMAAMDGQR 164
S + W +SP H+PQP WPP A QQ ++ +A AM+ +R
Sbjct: 119 SAASSWPTAASPPGGPQHHQPQPPLWTPTPPSPASDWPPLAPQQATSEPRAHPAMEAER 177
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 37.7 bits (86), Expect = 0.004
Identities = 31/106 (29%), Positives = 36/106 (33%), Gaps = 17/106 (16%)
Query: 56 HHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWAS 115
HHH QM P+ P PP P Q P S P +P S
Sbjct: 741 HHHQQMQQAPAPVPQQPPPPPQ-----QPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKS 795
Query: 116 SPP---SHQAPWIPPSSPTTFHH---------LHRPQPTWPPGAQQ 149
SPP + Q P + P P + LH PQP PP Q
Sbjct: 796 SPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQ 841
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 37.0 bits (84), Expect = 0.008
Identities = 30/81 (37%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 64 TPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAP 123
TPS+ PP P ALA S LQ SP + +PP P A P QAP
Sbjct: 583 TPSSIATPPPQAPPALA-------SPPLQGLPSPPLSPLATPPPQAPPXLAL--PPLQAP 633
Query: 124 WIPPSSPTTFHHLHRPQPTWP 144
PP+SP L P P P
Sbjct: 634 PSPPASP-PLSPLATPSPQAP 653
Score = 28.9 bits (63), Expect = 2.1
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 65 PSNTPATP-PNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAP 123
P + ATP P P+ALA+ L+A SP A SPPA+ P S+ P QAP
Sbjct: 641 PLSPLATPSPQAPNALAVHL-LQAP--FSPPPSPPVQAPFSPPAS-PPVSPSATPPSQAP 696
Query: 124 --------WIPPSSPTT--FHHLHRPQPTWPP 145
+PPS P + P P PP
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 728
Score = 28.1 bits (61), Expect = 3.6
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 15/66 (22%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPW 124
P + PA+PP P A S +P A A FSP SPP QAP+
Sbjct: 633 PPSPPASPPLSPLATP------------SPQAPNALAVHLLQAPFSP--PPSPPV-QAPF 677
Query: 125 IPPSSP 130
PP+SP
Sbjct: 678 SPPASP 683
Score = 27.3 bits (59), Expect = 6.1
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Query: 64 TPSNTPATPP--NFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQ 121
TP + TPP N P A LQ++++P+T P +P +PPS
Sbjct: 525 TPPASLTTPPLENLPSL--------APPPLQTASAPLTTPHLETPPCPAPCPLQAPPS-P 575
Query: 122 APWIPPSSPTTFHHLHRPQPTWPP 145
PP +P++ + P P PP
Sbjct: 576 LTTPPPETPSS---IATPPPQAPP 596
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.2 bits (82), Expect = 0.013
Identities = 39/107 (36%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 65 PSNTPATP-PNFPDALAMFS----KLRAS---EGLQSSNSPMTA----AACSP-----PA 107
P PATP P AL+M S K RA+ +G+ +S SP A AA P PA
Sbjct: 896 PKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPA 955
Query: 108 NFSPFWASSPPSHQAPWIPPSSPTTFHHLHRPQP--TWPPGAQQGGA 152
SP WA +PP+ P P P T P P PP + G A
Sbjct: 956 TPSPKWAPTPPAATPP-SPKGGPATPSPKGAPTPPAATPPSPKGGPA 1001
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 35.4 bits (80), Expect = 0.022
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 35 AHWQFETALSTFFQETNIPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSS 94
AH F T + ++ ++HH TP++T PN P + + + + SS
Sbjct: 1512 AHSSFSTNKTPTSLHSHTSSTHHPE---VTPTSTTTITPN-PTSTRTRTPVAHTNSATSS 1567
Query: 95 NSPMTAAACSPPANFSPFWASSPPSHQAPWIPPSSPTTFHHLHRPQPTWP 144
P SPP SPF ++ P + + + PT H PQ T P
Sbjct: 1568 RPPPPFTTHSPPTGSSPFSSTGPMTATSFKTTTTYPTPSH----PQTTLP 1613
Score = 32.7 bits (73), Expect = 0.14
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 38 QFETALSTFFQETNIP--NSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSN 95
Q ++ ST T++P S HH + S T TP + + + + + SS
Sbjct: 1904 QSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKH--TSTGTRTPVAHTTSASSSR 1961
Query: 96 SPMTAAACSPPANFSPFWASSPPSHQAPWIPPSSPTTFHHLHRPQPTWP 144
P SPP SPF ++ P + + + PT H PQ T P
Sbjct: 1962 LPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPSH----PQTTLP 2006
>gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens]
Length = 949
Score = 35.4 bits (80), Expect = 0.022
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 63 CTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQA 122
C SNT A+P + P F+ + L S +P ++ A S S F++SS
Sbjct: 701 CANSNT-ASPSSHPST--SFANMAT---LPSCPAPSSSPALSSVPE-SSFYSSSGGGGST 753
Query: 123 PWIPPSSPTTFHHLHRPQPTWPP 145
IP S+P HH H QP PP
Sbjct: 754 GNIPASNPNHHHHHHHQQPPAPP 776
>gi|56550057 CCR4-NOT transcription complex, subunit 4 isoform a
[Homo sapiens]
Length = 639
Score = 35.0 bits (79), Expect = 0.029
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 9 RHQVMINQFVLAAGCA-----ADQAKQLLQAAHWQFETALSTFFQETNIPNSHHHHQMMC 63
+H+ + N F A A ++ H T+ S F + N+P H+
Sbjct: 478 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFL-DLNLPPQHNTGLGGI 536
Query: 64 TPSNTPATPPNFPDALAMFSK---LRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSH 120
+ PA+ N D+L + L++ + L + P +AA S + +PF ++ P H
Sbjct: 537 PVAGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGP--SAAPSQTHHSAPF-STQIPLH 593
Query: 121 QAPW---IPPSSPTTFHHLHRPQPTWPPGAQ 148
+A W PPS+P++FH + PPG Q
Sbjct: 594 RASWNPYPPPSNPSSFH-------SPPPGFQ 617
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 34.3 bits (77), Expect = 0.050
Identities = 23/92 (25%), Positives = 35/92 (38%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPW 124
P P P + + + R+S L S+S +++ P P SSPP
Sbjct: 329 PRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRL 388
Query: 125 IPPSSPTTFHHLHRPQPTWPPGAQQGGAQQKA 156
P +SP H P T PP + Q++
Sbjct: 389 SPSASPPRRRHRPSPPATPPPKTRHSPTPQQS 420
Score = 32.3 bits (72), Expect = 0.19
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 86 RASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPWIP---PSSPTTFHHLHRPQPT 142
R S S SP AA PPA SP + SP ++ +P +P SPT P P+
Sbjct: 746 RVSSSRSVSGSPEPAAK-KPPAPPSPVQSQSPSTNWSPAVPVKKAKSPT-------PSPS 797
Query: 143 WPPGA-QQGGAQQK 155
P + Q+GG ++K
Sbjct: 798 PPRNSDQEGGGKKK 811
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.9 bits (76), Expect = 0.065
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 59 HQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNS-----PMTAAACSPPANFSPFW 113
H + S+ PA P FP + + S AS SS+S P + A S P +F P
Sbjct: 357 HSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPT 416
Query: 114 ASSPPSHQAPWIPPSSPTTFHHLHRPQPTWPPG 146
+ S + + PS P+ P P P G
Sbjct: 417 SLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYG 449
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.9 bits (76), Expect = 0.065
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 59 HQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNS-----PMTAAACSPPANFSPFW 113
H + S+ PA P FP + + S AS SS+S P + A S P +F P
Sbjct: 357 HSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPT 416
Query: 114 ASSPPSHQAPWIPPSSPTTFHHLHRPQPTWPPG 146
+ S + + PS P+ P P P G
Sbjct: 417 SLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYG 449
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 33.9 bits (76), Expect = 0.065
Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPP---SHQ 121
PS TP+T P P M+ + P T PPA F P S PP +
Sbjct: 55 PSATPSTVPFGPAPTGMYPSV-----------PPTGPPPGPPAPFPPSGPSCPPPGGPYP 103
Query: 122 APWIPPSSPT--------TFHHLHRP--QPTWPPGA 147
AP +P PT F L RP PT P A
Sbjct: 104 APTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAA 139
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 33.5 bits (75), Expect = 0.085
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 64 TPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPP----- 118
TP+ T PP + A ++L S S++P T+ + S P S S+ P
Sbjct: 4189 TPTGTQTGPPTH-TSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEM 4247
Query: 119 SHQAPWIPPSSPTTFHHLHRPQP-----TWPPGAQQGGAQQKAMAA 159
+ AP P++PTT H P T PPG G + +A
Sbjct: 4248 TSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSA 4293
Score = 29.3 bits (64), Expect = 1.6
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPW 124
P+ TP TPP L + S ++ +P SPP +P + + P
Sbjct: 1542 PTTTPITPPTSTTTLPPTTT--PSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPT 1599
Query: 125 IPPSSPTTFHHLHRPQPTWPP 145
PS PTT P PT P
Sbjct: 1600 TTPSPPTT--TTTTPPPTTTP 1618
Score = 27.7 bits (60), Expect = 4.6
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPW 124
P+ TP TPP L + S ++ +P SPP +P + + P
Sbjct: 1621 PTTTPITPPTSTTTLPPTTT--PSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPT 1678
Query: 125 IPPSSPTT 132
PSSP T
Sbjct: 1679 TTPSSPIT 1686
Score = 27.3 bits (59), Expect = 6.1
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPW 124
P+ TP+ PP + S ++ SP T +PP +P ++ + P
Sbjct: 1558 PTTTPSPPPTTTTTPPPTTT--PSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPT 1615
Query: 125 IPPSSPTT 132
PS PTT
Sbjct: 1616 TTPSPPTT 1623
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 33.1 bits (74), Expect = 0.11
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 85 LRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPWIPPSSPTTFHHLHRPQPTWP 144
LRAS QS P A PPA P PP+ +PP P F P WP
Sbjct: 334 LRASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPPFPPGMF-------PLWP 386
Query: 145 P 145
P
Sbjct: 387 P 387
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 33.1 bits (74), Expect = 0.11
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 85 LRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPWIPPSSPTTFHHLHRPQPTWP 144
LRAS QS P A PPA P PP+ +PP P F P WP
Sbjct: 334 LRASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPPFPPGMF-------PLWP 386
Query: 145 P 145
P
Sbjct: 387 P 387
>gi|40068065 hypothetical protein LOC54058 [Homo sapiens]
Length = 322
Score = 33.1 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Query: 114 ASSPPSHQAPWIP----PSSPTTFHHLHRPQPTWPPGA 147
A P H P +P P P HH H WPPGA
Sbjct: 269 ALQDPPHVPPRVPRAARPRLPAVHHHHHHHHAVWPPGA 306
>gi|4505619 paired box 7 isoform 1 [Homo sapiens]
Length = 520
Score = 32.7 bits (73), Expect = 0.14
Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 43 LSTFFQETNIPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAA 102
L F+ T+ P+ + ++ T A FS RA Q+ + + A
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEAR------VQVWFSNRRARWRKQAGANQLAAFN 285
Query: 103 CSPPANFSPFWASSPPSHQAPWIPPSSPTTF------HHLHRPQPTWPPGAQQGGAQQKA 156
P F P + P +Q P + PTT +HRPQP P QGG A
Sbjct: 286 HLLPGGFPPTGMPTLPPYQLP--DSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAA 343
Query: 157 MAA 159
AA
Sbjct: 344 AAA 346
>gi|7524359 paired box 7 isoform 2 [Homo sapiens]
Length = 518
Score = 32.7 bits (73), Expect = 0.14
Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 43 LSTFFQETNIPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAA 102
L F+ T+ P+ + ++ T A FS RA Q+ + + A
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEAR------VQVWFSNRRARWRKQAGANQLAAFN 283
Query: 103 CSPPANFSPFWASSPPSHQAPWIPPSSPTTF------HHLHRPQPTWPPGAQQGGAQQKA 156
P F P + P +Q P + PTT +HRPQP P QGG A
Sbjct: 284 HLLPGGFPPTGMPTLPPYQLP--DSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAA 341
Query: 157 MAA 159
AA
Sbjct: 342 AAA 344
>gi|207029223 paired box 7 isoform 3 [Homo sapiens]
Length = 505
Score = 32.7 bits (73), Expect = 0.14
Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 43 LSTFFQETNIPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAA 102
L F+ T+ P+ + ++ T A FS RA Q+ + + A
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEAR------VQVWFSNRRARWRKQAGANQLAAFN 285
Query: 103 CSPPANFSPFWASSPPSHQAPWIPPSSPTTF------HHLHRPQPTWPPGAQQGGAQQKA 156
P F P + P +Q P + PTT +HRPQP P QGG A
Sbjct: 286 HLLPGGFPPTGMPTLPPYQLP--DSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAA 343
Query: 157 MAA 159
AA
Sbjct: 344 AAA 346
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 32.7 bits (73), Expect = 0.14
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 2 SVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETN---------- 51
S ++D + H + VL A D+ + +L + E + F TN
Sbjct: 377 SSDLDPIEHSSESDNSVLEIPDAFDRTENMLSMQ--KNEKIKYSRFAATNTRVKAKQKPL 434
Query: 52 IPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFS 110
I NSH H M CT S P T + S L+AS + S T A SP N S
Sbjct: 435 ISNSHTDHLMGCTKSAEPGT----ETSQVNLSDLKASTLVHKPQSDFTNDALSPKFNLS 489
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 32.7 bits (73), Expect = 0.14
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 2 SVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETN---------- 51
S ++D + H + VL A D+ + +L + E + F TN
Sbjct: 646 SSDLDPIEHSSESDNSVLEIPDAFDRTENMLSMQ--KNEKIKYSRFAATNTRVKAKQKPL 703
Query: 52 IPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFS 110
I NSH H M CT S P T + S L+AS + S T A SP N S
Sbjct: 704 ISNSHTDHLMGCTKSAEPGT----ETSQVNLSDLKASTLVHKPQSDFTNDALSPKFNLS 758
>gi|29568099 p47 protein isoform b [Homo sapiens]
Length = 339
Score = 32.7 bits (73), Expect = 0.14
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 11 QVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQE 49
Q + +FV G D+A+ L++A W + AL++F+++
Sbjct: 6 QEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44
>gi|20149635 p47 protein isoform a [Homo sapiens]
Length = 370
Score = 32.7 bits (73), Expect = 0.14
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 11 QVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQE 49
Q + +FV G D+A+ L++A W + AL++F+++
Sbjct: 6 QEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 32.7 bits (73), Expect = 0.14
Identities = 30/114 (26%), Positives = 39/114 (34%), Gaps = 17/114 (14%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAA---ACSPPANFSPFWASSPPSHQ 121
P P PP P L S ++ L S P+T +PP +P PP
Sbjct: 176 PPTPPPPPPPLPPPLPSSSPIKTP--LVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPT 233
Query: 122 APWIPPSS------------PTTFHHLHRPQPTWPPGAQQGGAQQKAMAAMDGQ 163
P +PP+S P + P P PP G + A A D Q
Sbjct: 234 PPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQ 287
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 32.7 bits (73), Expect = 0.14
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 29/125 (23%)
Query: 50 TNIPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKL----------------RASEGLQS 93
T +P+S ++ P P PD + S+ + EG QS
Sbjct: 575 TPLPDSDEDEELDLGLGPRPPPEPGPPDPAGLLSQTAEVALDLVGDRTPTSEKMDEGQQS 634
Query: 94 S------------NSPMTAAACSPPANFSPFWAS-SPPSHQAPWIPPSSPTTFHHLHRPQ 140
S ++P+T+A C P +P A+ + PS AP +P P F L P
Sbjct: 635 SGEDMEISDDEMPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPP 694
Query: 141 PTWPP 145
P PP
Sbjct: 695 PPPPP 699
>gi|169171448 PREDICTED: hypothetical protein [Homo sapiens]
Length = 74
Score = 32.3 bits (72), Expect = 0.19
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 115 SSPPSHQAPWIPPSSPTTFHHLHRPQPTWPPGAQQG 150
S P SHQ P PP++P H H PQ ++ QG
Sbjct: 17 SRPHSHQNPACPPANPLQQCHSHLPQRSYSAKRSQG 52
>gi|239751824 PREDICTED: hypothetical protein [Homo sapiens]
Length = 161
Score = 32.3 bits (72), Expect = 0.19
Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPW 124
P PA PP ++ L+ + SP + P A P SSP A
Sbjct: 14 PRALPAQPPLLDARWHSWATAGRGRCLRVARSP----SYWPDAKAPPRGFSSPNPDSAAS 69
Query: 125 IPPSSPTTFHHLHRPQPTWPP------GAQQGGAQQKAMAAMDG 162
P SS TF LH P P WP A +G ++ M+G
Sbjct: 70 HPASSSQTFGRLHTP-PDWPAAEPPAHNANRGHCGVQSFGQMEG 112
>gi|169171883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 74
Score = 32.3 bits (72), Expect = 0.19
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 115 SSPPSHQAPWIPPSSPTTFHHLHRPQPTWPPGAQQG 150
S P SHQ P PP++P H H PQ ++ QG
Sbjct: 17 SRPHSHQNPACPPANPLQQCHSHLPQRSYSAKRSQG 52
>gi|239746315 PREDICTED: hypothetical protein XP_002343693 [Homo
sapiens]
Length = 161
Score = 32.3 bits (72), Expect = 0.19
Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 65 PSNTPATPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPW 124
P PA PP ++ L+ + SP + P A P SSP A
Sbjct: 14 PRALPAQPPLLDARWHSWATAGRGRCLRVARSP----SYWPDAKAPPRGFSSPNPDSAAS 69
Query: 125 IPPSSPTTFHHLHRPQPTWPP------GAQQGGAQQKAMAAMDG 162
P SS TF LH P P WP A +G ++ M+G
Sbjct: 70 HPASSSQTFGRLHTP-PDWPAAEPPAHNANRGHCGVQSFGQMEG 112
>gi|169171116 PREDICTED: hypothetical protein [Homo sapiens]
Length = 74
Score = 32.3 bits (72), Expect = 0.19
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 115 SSPPSHQAPWIPPSSPTTFHHLHRPQPTWPPGAQQG 150
S P SHQ P PP++P H H PQ ++ QG
Sbjct: 17 SRPHSHQNPACPPANPLQQCHSHLPQRSYSAKRSQG 52
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.125 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,798,565
Number of Sequences: 37866
Number of extensions: 414303
Number of successful extensions: 2988
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 2677
Number of HSP's gapped (non-prelim): 544
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.