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Search of human proteins with 32698864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698864 hypothetical protein LOC149466 [Homo sapiens]
(113 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698864 hypothetical protein LOC149466 [Homo sapiens] 236 4e-63
gi|12597641 leucine rich repeat containing 19 [Homo sapiens] 42 1e-04
gi|187960059 syndecan 3 [Homo sapiens] 32 0.14
gi|239756155 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
gi|31543559 radial spoke 3 homolog [Homo sapiens] 30 0.54
gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo sapi... 30 0.54
gi|38570146 synaptotagmin VII [Homo sapiens] 29 0.70
gi|40254947 thioredoxin-related transmembrane protein 4 [Homo sa... 29 0.92
gi|27754773 protocadherin 1 isoform 2 precursor [Homo sapiens] 29 0.92
gi|27754771 protocadherin 1 isoform 1 precursor [Homo sapiens] 29 0.92
gi|7705692 zinc finger protein 691 [Homo sapiens] 29 0.92
gi|216548395 dachsous 2 isoform 3 [Homo sapiens] 28 1.2
gi|216548385 dachsous 2 isoform 2 [Homo sapiens] 28 1.2
gi|194097398 protein tyrosine phosphatase, receptor type, G prec... 28 1.6
gi|31982899 seven in absentia homolog 2 [Homo sapiens] 28 1.6
gi|15529990 granzyme H [Homo sapiens] 28 1.6
gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens] 28 1.6
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 28 2.0
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 28 2.0
gi|4506263 prostaglandin I2 (prostacyclin) receptor (IP) [Homo s... 28 2.0
gi|66346700 N-acetylglucosamine-1-phosphodiester alpha-N-acetylg... 28 2.0
gi|25014088 solute carrier family 34 (sodium phosphate), member ... 28 2.0
gi|119395742 integrin alpha chain, alpha 6 isoform b precursor [... 27 2.7
gi|239049118 linker for activation of T cells isoform d [Homo sa... 27 2.7
gi|62739157 linker for activation of T cells isoform c [Homo sap... 27 2.7
gi|62739155 linker for activation of T cells isoform b [Homo sap... 27 2.7
gi|7657293 linker for activation of T cells isoform a [Homo sapi... 27 2.7
gi|169214023 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7
gi|169173235 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7
gi|169214468 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7
>gi|32698864 hypothetical protein LOC149466 [Homo sapiens]
Length = 113
Score = 236 bits (601), Expect = 4e-63
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 1 MNETNKTLVGPSELPTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRY 60
MNETNKTLVGPSELPTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRY
Sbjct: 1 MNETNKTLVGPSELPTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRY 60
Query: 61 HASYRHRPLPETGRGGRPQVAEDEDDDGFIEDNYIQPGTGELGTEGSRDHFSL 113
HASYRHRPLPETGRGGRPQVAEDEDDDGFIEDNYIQPGTGELGTEGSRDHFSL
Sbjct: 61 HASYRHRPLPETGRGGRPQVAEDEDDDGFIEDNYIQPGTGELGTEGSRDHFSL 113
>gi|12597641 leucine rich repeat containing 19 [Homo sapiens]
Length = 370
Score = 42.0 bits (97), Expect = 1e-04
Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 27/94 (28%)
Query: 29 RAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASYRHRPLP-------ETGRGGRP--- 78
++W LVG V+ + SLLI +A KC + SY H L E G G P
Sbjct: 268 KSWAFLVGVVVTVLTTSLLIFIAIKCPIWYNILLSYNHHRLEEHEAETYEDGFTGNPSSL 327
Query: 79 -QVAEDE----------------DDDGFIEDNYI 95
Q+ E DDDGFIED YI
Sbjct: 328 SQIPETNSEETTVIFEQLHSFVVDDDGFIEDKYI 361
>gi|187960059 syndecan 3 [Homo sapiens]
Length = 442
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 18 SAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASYRHRPLPETGRGGR 77
+A G G GA A P G +L ++L LL AA +R+ + RP+ G G
Sbjct: 11 AAHGAGAGAGAAAGPGARGLLLPPLLLLLLAGRAAGA---QRWRSENFERPVDLEGSGDD 67
Query: 78 PQVAEDEDDD 87
+DE DD
Sbjct: 68 DSFPDDELDD 77
>gi|239756155 PREDICTED: hypothetical protein [Homo sapiens]
Length = 184
Score = 31.2 bits (69), Expect = 0.19
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 15 PTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASYRHRPLPETGR 74
P A AP RA V+V FV V ++L +L + C R A+ R P P TG
Sbjct: 7 PGALNAAPRAFINKRAVYVIVSFVSQGKVPAILSSLPLEMPGCLRALAAVREGPRPRTGP 66
Query: 75 GGRPQVA 81
P+ A
Sbjct: 67 AWLPRSA 73
>gi|31543559 radial spoke 3 homolog [Homo sapiens]
Length = 560
Score = 29.6 bits (65), Expect = 0.54
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 38 VLGAVVLSLLIALAAKCHLCRRYHASYRHR-PLPETGRGGRPQVAEDEDDDGFIEDNYIQ 96
++G VL +LI + LC H H+ P PE GG + E + F+E + Q
Sbjct: 450 MVGRTVLDMLIREVVEKRLCMYEHGEDTHQSPEPEDEPGGPGAMTESLEASEFLEQSMSQ 509
Query: 97 PGTGELGTEG 106
T EL +G
Sbjct: 510 --TRELLLDG 517
>gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo
sapiens]
Length = 267
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 8 LVGPSELPTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASYRHR 67
L + P + A G A +++G +G ++L LLI A C L RR+ A+ +
Sbjct: 178 LAAQPQPPRPARPACGSSPMAEQLALVIGGTIGGLLLLLLIG--ASCCLWRRFCATLTYE 235
Query: 68 PLPET 72
LP T
Sbjct: 236 ELPGT 240
>gi|38570146 synaptotagmin VII [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 21 APGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLC-----RRYHASYRHRPLPETGRG 75
A PG +R VL+ + V LS+ + L CH C +RY S P++GRG
Sbjct: 7 AASPGAPSR--DVLLVSAIITVSLSVTVVLCGLCHWCQRKLGKRYKNSLETVGTPDSGRG 64
>gi|40254947 thioredoxin-related transmembrane protein 4 [Homo
sapiens]
Length = 349
Score = 28.9 bits (63), Expect = 0.92
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 14/78 (17%)
Query: 27 GARAWPVLVGFVLGAVVLSLLIALA----AKC-------HLCRRYHASYRHRPLPETGRG 75
G AW V FV+ +V L + L ++C HL R S ++R E R
Sbjct: 182 GIPAWCSYVFFVIATLVFGLFMGLVLVVISECFYVPLPRHLSER---SEQNRRSEEAHRA 238
Query: 76 GRPQVAEDEDDDGFIEDN 93
+ Q AE+E DD E+N
Sbjct: 239 EQLQDAEEEKDDSNEEEN 256
>gi|27754773 protocadherin 1 isoform 2 precursor [Homo sapiens]
Length = 1237
Score = 28.9 bits (63), Expect = 0.92
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 33 VLVGFVLGAVVLSLLIALAAKCHLCRRYHA 62
+L G V G V ++LLIALA CR+ A
Sbjct: 853 ILFGVVAGVVAVALLIALAVLVRYCRQREA 882
>gi|27754771 protocadherin 1 isoform 1 precursor [Homo sapiens]
Length = 1060
Score = 28.9 bits (63), Expect = 0.92
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 33 VLVGFVLGAVVLSLLIALAAKCHLCRRYHA 62
+L G V G V ++LLIALA CR+ A
Sbjct: 853 ILFGVVAGVVAVALLIALAVLVRYCRQREA 882
>gi|7705692 zinc finger protein 691 [Homo sapiens]
Length = 284
Score = 28.9 bits (63), Expect = 0.92
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 69 LPETGRGGRPQVAEDEDDDGFIEDNYIQPGTGELGTEGSRD 109
LPE G GG+P +D E ++I PG E G E D
Sbjct: 13 LPEEGEGGKPWRVDDS------EGSWIPPGEKEHGQESLSD 47
>gi|216548395 dachsous 2 isoform 3 [Homo sapiens]
Length = 709
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 68 PLPETGRGGRPQVAEDEDDDGFIEDNYIQPGTGELGT-----EGSRDHFS 112
P + G ++ED DD ++D ++ P TG + T RDH+S
Sbjct: 91 PAAQQQEGSGFFLSEDSDDSPLLDDFHVHPDTGIIRTARRLDRERRDHYS 140
>gi|216548385 dachsous 2 isoform 2 [Homo sapiens]
Length = 1369
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 68 PLPETGRGGRPQVAEDEDDDGFIEDNYIQPGTGELGT-----EGSRDHFS 112
P + G ++ED DD ++D ++ P TG + T RDH+S
Sbjct: 91 PAAQQQEGSGFFLSEDSDDSPLLDDFHVHPDTGIIRTARRLDRERRDHYS 140
>gi|194097398 protein tyrosine phosphatase, receptor type, G
precursor [Homo sapiens]
Length = 1445
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 9 VGPSELPTASAVA-PGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHAS---Y 64
V P+E T+ ++ P PG P++V L V L LLIA+ C + +
Sbjct: 716 VNPAEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRGCNKIKSKGFPR 775
Query: 65 RHRPLPETGRGG 76
R R +P +G G
Sbjct: 776 RFREVPSSGERG 787
>gi|31982899 seven in absentia homolog 2 [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 10 GPSELPTASAVAPGPGTGARAWPV 33
G S +P A+AV GPG G A PV
Sbjct: 44 GSSAVPAAAAVISGPGGGGGAGPV 67
>gi|15529990 granzyme H [Homo sapiens]
Length = 246
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 7 TLVGPSELPTASA-VAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASY 64
T V P LP++ A V PG W + L + +L+ + C R +H +Y
Sbjct: 122 TAVRPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLATTLQEVLLTVQKDCQCERLFHGNY 180
>gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens]
Length = 393
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 15 PTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASYR 65
P +A P P T AW A+ L+ L+ L LC R H ++R
Sbjct: 296 PPRAARGPTPRTEEAAW--------AAMALTFLLVLLTLATLCTRLHRNFR 338
>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
sapiens]
Length = 848
Score = 27.7 bits (60), Expect = 2.0
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 6 KTLVGPSELPTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKC--------HLC 57
+T P+ +P + G TGA ++V FVL VV+ + KC +LC
Sbjct: 691 RTSAQPTAIPANGSPTSGLSTGAIVGILIVIFVLLLVVVDITCYFLNKCGLFMCIAVNLC 750
Query: 58 RRYHASYRHRPLPETGRGGRPQVAEDEDDDGFIE 91
+ + + + E G+ ++DE + +E
Sbjct: 751 GKAGPGAKGKDMEE----GKAAFSKDESKEPIVE 780
>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
sapiens]
Length = 858
Score = 27.7 bits (60), Expect = 2.0
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 6 KTLVGPSELPTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKC--------HLC 57
+T P+ +P + G TGA ++V FVL VV+ + KC +LC
Sbjct: 701 RTSAQPTAIPANGSPTSGLSTGAIVGILIVIFVLLLVVVDITCYFLNKCGLFMCIAVNLC 760
Query: 58 RRYHASYRHRPLPETGRGGRPQVAEDEDDDGFIE 91
+ + + + E G+ ++DE + +E
Sbjct: 761 GKAGPGAKGKDMEE----GKAAFSKDESKEPIVE 790
>gi|4506263 prostaglandin I2 (prostacyclin) receptor (IP) [Homo
sapiens]
Length = 386
Score = 27.7 bits (60), Expect = 2.0
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 22 PGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASYRHRPLPETGRGGRPQVA 81
PG + A+ LV ++ A+ L + LCR Y RH + G RP+
Sbjct: 179 PGGAAFSLAYAGLVALLVAAI---FLCNGSVTLSLCRMYRQQKRH----QGSLGPRPRTG 231
Query: 82 EDEDD 86
EDE D
Sbjct: 232 EDEVD 236
>gi|66346700 N-acetylglucosamine-1-phosphodiester
alpha-N-acetylglucosaminidase precursor [Homo sapiens]
Length = 515
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 41 AVVLSLLIALAAKCHLCRRYHASYRHRPLPETGRGGRPQVAEDEDDDG 88
A LSLL++ A + RR H Y + PL E G P AE E G
Sbjct: 466 AANLSLLLSRAERN---RRLHGDYAYHPLQE--MNGEPLAAEKEQPGG 508
>gi|25014088 solute carrier family 34 (sodium phosphate), member 3
[Homo sapiens]
Length = 599
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 18 SAVAPGPGTGA----RAWPVLVGFVLGAVVLSLLIALAA 52
+AV P G G RA+P+L+G +G +LL ALA+
Sbjct: 397 AAVVPLMGVGVISLDRAYPLLLGSNIGTTTTALLAALAS 435
>gi|119395742 integrin alpha chain, alpha 6 isoform b precursor [Homo
sapiens]
Length = 1073
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 26 TGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRR-----YHASY 64
+G W +LV + G ++L+LL+ + KC +R Y A+Y
Sbjct: 1011 SGVPWWIILVAILAGILMLALLVFILWKCGFFKRNKKDHYDATY 1054
>gi|239049118 linker for activation of T cells isoform d [Homo
sapiens]
Length = 269
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 33 VLVGFVLGAVVLSLLIALAAKCHLCRRYHASY 64
+LV VLG ++L +L L A C C R SY
Sbjct: 41 ILVPCVLGLLLLPILAMLMALCVHCHRLPGSY 72
>gi|62739157 linker for activation of T cells isoform c [Homo
sapiens]
Length = 232
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 33 VLVGFVLGAVVLSLLIALAAKCHLCRRYHASY 64
+LV VLG ++L +L L A C C R SY
Sbjct: 5 ILVPCVLGLLLLPILAMLMALCVHCHRLPGSY 36
>gi|62739155 linker for activation of T cells isoform b [Homo
sapiens]
Length = 233
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 33 VLVGFVLGAVVLSLLIALAAKCHLCRRYHASY 64
+LV VLG ++L +L L A C C R SY
Sbjct: 5 ILVPCVLGLLLLPILAMLMALCVHCHRLPGSY 36
>gi|7657293 linker for activation of T cells isoform a [Homo
sapiens]
Length = 262
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 33 VLVGFVLGAVVLSLLIALAAKCHLCRRYHASY 64
+LV VLG ++L +L L A C C R SY
Sbjct: 5 ILVPCVLGLLLLPILAMLMALCVHCHRLPGSY 36
>gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 27.3 bits (59), Expect = 2.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 17 ASAVAPGPGTGARAWPVLVG 36
A +APGP G+ WP L G
Sbjct: 102 AQLLAPGPAAGSGCWPELAG 121
>gi|169173235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 331
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 20/95 (21%)
Query: 35 VGFVLGAVVLSLLIALAAKCHLCRRYHASYRHRPLP-----------ETGRGGRPQVAED 83
+GF G L+ L + H CR +R P P G + + D
Sbjct: 1 MGFWCGCPFCLLVFLLTVRTHSCRSVGVCWRFTPDPVCLGISSGGCRTADTGEQQMLLPD 60
Query: 84 EDDDGFIEDNYIQ---------PGTGELGTEGSRD 109
F+ + Y+ G +LG G RD
Sbjct: 61 RSSGSFVSEEYLAVGGVSLPLLGGASQLGYSGVRD 95
>gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 27.3 bits (59), Expect = 2.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 17 ASAVAPGPGTGARAWPVLVG 36
A +APGP G+ WP L G
Sbjct: 102 AQLLAPGPAAGSGCWPELAG 121
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,647,318
Number of Sequences: 37866
Number of extensions: 269820
Number of successful extensions: 1133
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1099
Number of HSP's gapped (non-prelim): 83
length of query: 113
length of database: 18,247,518
effective HSP length: 83
effective length of query: 30
effective length of database: 15,104,640
effective search space: 453139200
effective search space used: 453139200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.