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Search of human proteins with 32698676
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]
(228 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens] 471 e-133
gi|5031865 lipoma HMGIC fusion partner [Homo sapiens] 96 3e-20
gi|30039704 lipoma HMGIC fusion partner-like 1 [Homo sapiens] 89 3e-18
gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens] 82 5e-16
gi|39752685 lipoma HMGIC fusion partner-like 3 [Homo sapiens] 75 6e-14
gi|32698930 lipoma HMGIC fusion partner-like 5 [Homo sapiens] 66 3e-11
gi|48717249 transmembrane protein 211 [Homo sapiens] 42 6e-04
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 35 0.041
gi|38348286 tumor protein p63 regulated 1 [Homo sapiens] 32 0.45
gi|169171977 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|169171016 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|239509059 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens] 30 1.7
gi|153791572 olfactory receptor, family 13, subfamily A, member ... 30 2.2
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ... 29 2.9
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [... 29 2.9
gi|153252029 C-type lectin domain family 1, member B isoform a [... 29 3.8
gi|22507403 preproneuropeptide B [Homo sapiens] 28 5.0
gi|169171558 PREDICTED: hypothetical protein [Homo sapiens] 28 5.0
gi|7657615 podocin [Homo sapiens] 28 6.5
gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens] 28 6.5
gi|18699730 solute carrier family 16, member 10 [Homo sapiens] 28 6.5
gi|22547134 mitochondrial ribosomal protein L37 [Homo sapiens] 28 6.5
gi|239749949 PREDICTED: hypothetical protein [Homo sapiens] 28 8.5
gi|148612887 choline transporter-like protein 4 [Homo sapiens] 28 8.5
gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Ho... 28 8.5
gi|149274653 patched domain containing 2 [Homo sapiens] 28 8.5
gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo... 28 8.5
>gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]
Length = 228
Score = 471 bits (1213), Expect = e-133
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MCHVIVTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPT 60
MCHVIVTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPT
Sbjct: 1 MCHVIVTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPT 60
Query: 61 LGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVF 120
LGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVF
Sbjct: 61 LGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVF 120
Query: 121 TMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCS 180
TMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCS
Sbjct: 121 TMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCS 180
Query: 181 LGWAFYTAIGGTVLTFICAVFSAQAEIATSSDKVQEEIEEGKNLICLL 228
LGWAFYTAIGGTVLTFICAVFSAQAEIATSSDKVQEEIEEGKNLICLL
Sbjct: 181 LGWAFYTAIGGTVLTFICAVFSAQAEIATSSDKVQEEIEEGKNLICLL 228
>gi|5031865 lipoma HMGIC fusion partner [Homo sapiens]
Length = 200
Score = 95.5 bits (236), Expect = 3e-20
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 6 VTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYA 65
+TC ++W LLS + A + F WL G G P + G +
Sbjct: 5 LTCTGVIWALLSFLCAATSCVGFFMPYWLWGSQL------------GKPVSF----GTFR 48
Query: 66 RC---IRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVFTM 122
RC + + Q CG YA SF I S W+ I +G +L +VAL ++
Sbjct: 49 RCSYPVHDESRQMMVMVEECGRYA-SFQGIPSAEWRICTIVTGLGCGLLLLVALTALMGC 107
Query: 123 CVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCSLG 182
CV ++ +++ V G +Q + GL + G LYP GW ++ CG+ + + G C +G
Sbjct: 108 CVSDLISRTVGRVAGGIQFLGGLLIGAGCALYPLGWDSEEVRQTCGYTSGQFDLGKCEIG 167
Query: 183 WAFY-TAIGGTVLTFIC---AVFSAQAE 206
WA+Y T G T +C A FS + +
Sbjct: 168 WAYYCTGAGATAAMLLCTWLACFSGKKQ 195
>gi|30039704 lipoma HMGIC fusion partner-like 1 [Homo sapiens]
Length = 220
Score = 89.0 bits (219), Expect = 3e-18
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 6 VTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYA 65
+T LW LS+V A ++ WL G G P + +
Sbjct: 5 LTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGSQM------------GKPVSF----STFR 48
Query: 66 RC---IRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVFTM 122
RC +R G + CG YA SF I S WQ + G +L +VAL +V
Sbjct: 49 RCNYPVRGEGHSLIMVEE-CGRYA-SFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGC 106
Query: 123 CVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCSLG 182
C++ ++ + + G Q + GL + G LYP GW + + CG+ ++ ++ G C LG
Sbjct: 107 CMEELISRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLG 166
Query: 183 WAFYTAIGGTVLT-FICAVFSAQA 205
WA+Y A GG IC S A
Sbjct: 167 WAYYCAGGGAAAAMLICTWLSCFA 190
>gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens]
Length = 247
Score = 81.6 bits (200), Expect = 5e-16
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 11 MLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYARCIRN 70
+LW + +I A ++ F+ W+ G +P+P + G++ C+
Sbjct: 24 VLWAIFTICFAIINVVVFIQPYWV-------------GDSVSTPKPGY--FGLFHYCV-- 66
Query: 71 PGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVG-IFILCMVALVSVFTMCVQSIMK 129
G R+ C F I S ++A A F+ + + IL + S+F C +
Sbjct: 67 -GSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFSLFFFCNTA--- 122
Query: 130 KSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCSLGWAFYTAI 189
+++ +C +Q +A L L+LG +++P GW + D CG Y GDCS+ WA+ AI
Sbjct: 123 -TVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAI 181
Query: 190 GGTVLTFICAVFSAQAEIATSSDKVQEEIE-EGKNLI 225
G +L + F A +D +QEE++ E K+ +
Sbjct: 182 IG-ILNALILSFLAFVLGNRQTDLLQEELKPENKDFV 217
>gi|39752685 lipoma HMGIC fusion partner-like 3 [Homo sapiens]
Length = 236
Score = 74.7 bits (182), Expect = 6e-14
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 11 MLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYARCIRN 70
+LW + +I A ++ F+ W+ G G P G++ CI N
Sbjct: 38 VLWAIFTICFAIVNVVCFIQPYWI---------------GDGVDTPQAGYFGLFHYCIGN 82
Query: 71 PGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKK 130
F R+ C F + SG ++A + F +G+ ++ ++A + FT+
Sbjct: 83 G----FSRELTCRGSFTDFSTLPSGAFKAASFF--IGLSMMLIIACIICFTLFF-FCNTA 135
Query: 131 SIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCSLGWAFYTAIG 190
+++ +C +Q + L+LG +++P GW + CG Y G CS+ WA+ AI
Sbjct: 136 TVYKICAWMQLTSAACLVLGCMIFPDGWDSDEVKRMCGEKTDKYTLGACSVRWAYILAII 195
Query: 191 G----TVLTFICAVF-----SAQAEIATSSDKV 214
G +L+F+ V S AE + +KV
Sbjct: 196 GILDALILSFLAFVLGNRQDSLMAEELKAENKV 228
>gi|32698930 lipoma HMGIC fusion partner-like 5 [Homo sapiens]
Length = 219
Score = 65.9 bits (159), Expect = 3e-11
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 44 VEPAGPGGGSPEPYHPTLGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIF 103
++P G P G+++ C+ N + +C F I S ++ F
Sbjct: 45 IQPYWIGDSVNTPQAGYFGLFSYCVGNV----LSSELICKGGPLDFSSIPSRAFKTAMFF 100
Query: 104 LAVGIFILC-MVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQK 162
+A+G+F++ + S+F +C + +++ +C +Q A L++G ++YP GW +
Sbjct: 101 VALGMFLIIGSIICFSLFFICNTA----TVYKICAWMQLAAATGLMIGCLVYPDGWDSSE 156
Query: 163 AIDYCGHYASAYKPGDCSLGWAFYTAI----GGTVLTFICAVFSAQAEIATSSDKVQEEI 218
CG Y G C++ WAF AI +L+F+ V + + D +
Sbjct: 157 VRRMCGEQTGKYTLGHCTIRWAFMLAILSIGDALILSFLAFVLGYRQDKLLPDDYKADGT 216
Query: 219 EE 220
EE
Sbjct: 217 EE 218
>gi|48717249 transmembrane protein 211 [Homo sapiens]
Length = 129
Score = 41.6 bits (96), Expect = 6e-04
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 139 LQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCSLGWAFYTAIGGTVLTFIC 198
+Q +A +I+GL+++P G + C +S Y G C LGW + TAI VL +
Sbjct: 38 VQAVAATAMIVGLLIFPIGLASPFIKEVC-EASSMYYGGKCRLGWGYMTAILNAVLASLL 96
Query: 199 AVFS 202
+ S
Sbjct: 97 PIIS 100
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 35.4 bits (80), Expect = 0.041
Identities = 57/216 (26%), Positives = 86/216 (39%), Gaps = 38/216 (17%)
Query: 8 CRSMLWTLLSIVVAFAEL----IAFMSADWLIGKAR-------SRGGVE--PAGPGGGSP 54
C + LL+ V AFA IA + WL +A + GG + P GGG+
Sbjct: 15 CEKGVQVLLTTVGAFAAFGLMTIAISTDYWLYTRALICNTTNLTAGGDDGTPHRGGGGAS 74
Query: 55 EPYHPT----LGIYARCIRNP-------GVQHFQRDTLCGPYAESFGEIASGFWQATAIF 103
E P G++ C + HF DT Y E +A++IF
Sbjct: 75 EKKDPGGLTHSGLWRICCLEGLKRGVCVKINHFPEDT---DYDHDSAEYLLRVVRASSIF 131
Query: 104 LAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKA 163
+ +L + + + +S K++I G+L AGL I+G+I+Y + +
Sbjct: 132 PILSAILLLLGGVCVAASRVYKS--KRNIILGAGILFVAAGLSNIIGVIVYISANAGEP- 188
Query: 164 IDYCGHYASAYKPGDCSLGWAFYTAIGGTVLTFICA 199
G K S GW+FY GG L+FI A
Sbjct: 189 ----GPKRDEEKKNHYSYGWSFY--FGG--LSFILA 216
>gi|38348286 tumor protein p63 regulated 1 [Homo sapiens]
Length = 275
Score = 32.0 bits (71), Expect = 0.45
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 11/94 (11%)
Query: 54 PEPYHPTLGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAI----------- 102
P PYH PG + L G AE+ GE GFW T I
Sbjct: 54 PNPYHQPYISRKYFATRPGAIETAMEDLKGHVAETSGETIQGFWLLTKIDHWNNEKERIL 113
Query: 103 FLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVC 136
+ ++C + + + +Q I +++ +C
Sbjct: 114 LVTDKTLLICKYDFIMLSCVQLQRIPLSAVYRIC 147
>gi|169171977 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 1.3
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 89 FGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLI 148
+G +S + TA F+ + + I+ ++ V C + + V GLL + G F I
Sbjct: 61 WGHESSDLRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQY---VAGLLFLMGGTFCI 117
Query: 149 LGLILYPAGWGCQKAIDYCGHYASAYKPGDCS--LGWAFYTAIGGTVLTFICAVFSAQA 205
+ L AG + + Y P D S GW+ + A GG LT I F A
Sbjct: 118 ISLCTCVAGINFE--LSRYPRYLYGL-PDDISHGYGWSMFCAWGGLGLTLISGFFCTLA 173
>gi|169171016 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 1.3
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 89 FGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLI 148
+G +S + TA F+ + + I+ ++ V C + + V GLL + G F I
Sbjct: 61 WGHESSDLRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQY---VAGLLFLMGGTFCI 117
Query: 149 LGLILYPAGWGCQKAIDYCGHYASAYKPGDCS--LGWAFYTAIGGTVLTFICAVFSAQA 205
+ L AG + + Y P D S GW+ + A GG LT I F A
Sbjct: 118 ISLCTCVAGINFE--LSRYPRYLYGL-PDDISHGYGWSMFCAWGGLGLTLISGFFCTLA 173
>gi|239509059 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 1.3
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 89 FGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLI 148
+G +S + TA F+ + + I+ ++ V C + + V GLL + G F I
Sbjct: 61 WGHESSDLRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQY---VAGLLFLMGGTFCI 117
Query: 149 LGLILYPAGWGCQKAIDYCGHYASAYKPGDCS--LGWAFYTAIGGTVLTFICAVFSAQA 205
+ L AG + + Y P D S GW+ + A GG LT I F A
Sbjct: 118 ISLCTCVAGINFE--LSRYPRYLYGL-PDDISHGYGWSMFCAWGGLGLTLISGFFCTLA 173
>gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]
Length = 338
Score = 30.0 bits (66), Expect = 1.7
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 118 SVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAI 164
+V T+C++S S ++ CGLL I GL +I+G P W Q+ I
Sbjct: 143 AVLTLCLES-QGLSGYDWCGLLGSILGLIIIVG----PGLWTLQEGI 184
>gi|153791572 olfactory receptor, family 13, subfamily A, member 1
[Homo sapiens]
Length = 328
Score = 29.6 bits (65), Expect = 2.2
Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 19/117 (16%)
Query: 111 LCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGL-FLILGLILYPAGWGCQKAIDYCGH 169
L +++ S + V ++ + + + L IA F++ ++ WG QKA C
Sbjct: 202 LLLLSCSSTYVNGVMIVLADAFYGIVNFLMTIASYGFIVSSILKVKTAWGRQKAFSTCSS 261
Query: 170 Y------------------ASAYKPGDCSLGWAFYTAIGGTVLTFICAVFSAQAEIA 208
+ S Y G L YT + T+ I + + + + A
Sbjct: 262 HLTVVCMYYTAVFYAYISPVSGYSAGKSKLAGLLYTVLSPTLNPLIYTLRNKEVKAA 318
>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 29.3 bits (64), Expect = 2.9
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 118 SVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPG 177
+V T+C++S + ++ CGLL I GL +I+G L+ G G Y A+ G
Sbjct: 143 AVLTLCLKSQVLSG-YDWCGLLGSILGLIIIVGPELWTLQEGTTGVYTILG-YVQAFLGG 200
Query: 178 -DCSLGWAFYTAI 189
SLG Y ++
Sbjct: 201 LALSLGLLVYRSL 213
>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 29.3 bits (64), Expect = 2.9
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 118 SVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAID--YCG-HYASAY 174
++ T+C++S + ++ CGLL I GL +I+G P W Q+ Y G Y A+
Sbjct: 143 AILTLCLESQVLSG-YDWCGLLGSILGLIIIVG----PGLWTLQEGTTGVYTGLGYVQAF 197
Query: 175 KPG-DCSLGWAFYTAI 189
G SLG Y ++
Sbjct: 198 LGGLALSLGLLVYRSL 213
>gi|153252029 C-type lectin domain family 1, member B isoform a
[Homo sapiens]
Length = 229
Score = 28.9 bits (63), Expect = 3.8
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 26/111 (23%)
Query: 84 PYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIF-----NVCGL 138
P S G +S +W+ A+ L ILC+ +V + + + S+M+++ N G
Sbjct: 17 PALISVGSASSSWWRVMALIL----LILCVGMVVGLVALGIWSVMQRNYLQGENENRTGT 72
Query: 139 LQGIAGLFLILGLILYPAGWGCQ---KAIDYCGHYASAYKPGDCSLGWAFY 186
LQ +A F CQ K + G + +K C W +Y
Sbjct: 73 LQQLAKRF-------------CQYVVKQSELKGTF-KGHKCSPCDTNWRYY 109
>gi|22507403 preproneuropeptide B [Homo sapiens]
Length = 125
Score = 28.5 bits (62), Expect = 5.0
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 43 GVEPAGPGGGSPE-PYHPTLGIYARCIRN--PGVQHFQR 78
G EP G G SPE HP L A C+++ P +Q +R
Sbjct: 61 GAEPPGGAGASPELQLHPRLRSLAVCVQDVAPNLQRCER 99
>gi|169171558 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 28.5 bits (62), Expect = 5.0
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 100 TAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWG 159
TA F+ + + I+ ++ V C + + V GLL + G F I+ L AG
Sbjct: 180 TAGFMGMAVAIILFGWIIGVLGCCWDRGLMQY---VAGLLFLMGGTFCIISLCTCVAGIN 236
Query: 160 CQKAIDYCGHYASAYKPGDCS--LGWAFYTAIGGTVLTFICAVFSAQA 205
+ + Y P D S GW+ + A GG LT I F A
Sbjct: 237 FE--LSRYPRYLYGL-PDDISHGYGWSMFCAWGGLGLTLISGFFCTLA 281
>gi|7657615 podocin [Homo sapiens]
Length = 383
Score = 28.1 bits (61), Expect = 6.5
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
Query: 36 GKARSRGGVEPAGPG-GGSP-EPYHPTLGIY-ARCIRNPGVQHFQRDTLCGPYAESFGEI 92
G+ R G EP+G G G+P EP P + +R G + + L G
Sbjct: 35 GRGRQEAGPEPSGSGRAGTPGEPRAPAATVVDVDEVRGSGEEGTEVVALLESERPEEGTK 94
Query: 93 ASGFWQATAIFLAVGIFILCMVALVSVF--TMCVQSIMKKSIFNVCGLLQGIA---GLFL 147
+SG + + + + + M S++ VQ + IF + LL G A GLF
Sbjct: 95 SSGLGACEWLLVLISLLFIIMTFPFSIWFCVKVVQEYERVIIFRLGHLLPGRAKGPGLFF 154
Query: 148 IL 149
L
Sbjct: 155 FL 156
>gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens]
Length = 338
Score = 28.1 bits (61), Expect = 6.5
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 118 SVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPG 177
+V T+C++S + CGLL I GL +ILG L+ G G Y A+ G
Sbjct: 143 AVLTLCLES-QGLGGYEWCGLLGSILGLIIILGPGLWTLQEGTTGVYTTLG-YVQAFLGG 200
Query: 178 -DCSLGWAFYTAI 189
SLG Y ++
Sbjct: 201 LALSLGLLVYRSL 213
>gi|18699730 solute carrier family 16, member 10 [Homo sapiens]
Length = 515
Score = 28.1 bits (61), Expect = 6.5
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Query: 110 ILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGH 169
++ + ++ +F C SIM F + G + +LG + P G
Sbjct: 385 LIAVCLIMGLFDGCFISIMAPIAFELVGAQDVSQAIGFLLGFMSIPMTVG--------PP 436
Query: 170 YASAYKPGDCSLGWAFYTA-----IGGTVLTFICAVFS-AQAEIA--TSSDKVQEEIEEG 221
A + S AFY A IGG VL FI + S Q EI+ T +K+++ +E
Sbjct: 437 IAGLLRDKLGSYDVAFYLAGVPPLIGGAVLCFIPWIHSKKQREISKTTGKEKMEKMLENQ 496
Query: 222 KNLI 225
+L+
Sbjct: 497 NSLL 500
>gi|22547134 mitochondrial ribosomal protein L37 [Homo sapiens]
Length = 423
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 33 WLIGKARSRGGVEPAGPGGGSPEPYHPTLGIY 64
W + + R VEP GP G PE + L +Y
Sbjct: 387 WCLPVIKKRVVVEPVGPVGFKPETFRKFLALY 418
>gi|239749949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 27.7 bits (60), Expect = 8.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 42 GGVEPAGPGGGSPEPYHPTLGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATA 101
GG E AG GGG P P +G+ A PG R +L P +F +G Q+
Sbjct: 79 GGEERAGSGGGRSCPGVPRVGVQA-----PGDAGDSRSSLALPGWPAFALHTAGAQQSLP 133
Query: 102 IFL 104
+ +
Sbjct: 134 LLM 136
>gi|148612887 choline transporter-like protein 4 [Homo sapiens]
Length = 710
Score = 27.7 bits (60), Expect = 8.5
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 23/120 (19%)
Query: 59 PTLGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVS 118
P ++A I +PG + +T C P A G ++C+ S
Sbjct: 385 PQYVLWASNISSPGCEKVPINTSCNPTAHLVNSSCPG--------------LMCVFQGYS 430
Query: 119 VFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGD 178
+ ++++S+FN+ + G+ GLF L +L A C A + Y + +KP D
Sbjct: 431 -----SKGLIQRSVFNL--QIYGVLGLFWTLNWVL--ALGQCVLAGAFASFYWAFHKPQD 481
>gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Homo
sapiens]
Length = 327
Score = 27.7 bits (60), Expect = 8.5
Identities = 54/220 (24%), Positives = 77/220 (35%), Gaps = 50/220 (22%)
Query: 5 IVTCRSMLWTLLSIVVAFAEL----IAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPT 60
+V C L LL+ AFA IA + WL A G G P
Sbjct: 1 MVRCDRGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTNLTMDDGPPPRRARGD 60
Query: 61 L------------GIY-ARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVG 107
L GIY C R + HF D Y E +A+++F +
Sbjct: 61 LTHSGLWRVCCIEGIYKGHCFR---INHFPEDN---DYDHDSSEYLLRIVRASSVFPILS 114
Query: 108 IFILCMVALVSVFTMCVQS----IMKKSIFNVCGLLQGIAGLFLILGLILY----PAGWG 159
+L + L C+ + K +I G+L AGL I+G+I+Y
Sbjct: 115 TILLLLGGL------CIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVYISSNTGDPS 168
Query: 160 CQKAIDYCGHYASAYKPGDCSLGWAFYTAIGGTVLTFICA 199
++ D HY + GW+FY L+FI A
Sbjct: 169 DKRDEDKKNHY---------NYGWSFYFG----ALSFIVA 195
>gi|149274653 patched domain containing 2 [Homo sapiens]
Length = 1392
Score = 27.7 bits (60), Expect = 8.5
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 12/76 (15%)
Query: 111 LCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGW--GCQKAI---- 164
LC + L + + ++ I + +L I G+ ++ I+Y +GW G +AI
Sbjct: 1184 LCGLVLSLLICVAAVAVFTTHILLLLPVLLSILGIVCLVVTIMYWSGWEMGAVEAISLSI 1243
Query: 165 ------DYCGHYASAY 174
DYC H Y
Sbjct: 1244 LVGSSVDYCVHLVEGY 1259
>gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo
sapiens]
Length = 311
Score = 27.7 bits (60), Expect = 8.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 94 SGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLIL 153
S +Q A+ +A+ I+ V +SV C Q+ K F C GLF +LG++L
Sbjct: 183 SSMYQTKAVIIAM---IITAVVSISVTIFCFQT---KVDFTSC------TGLFCVLGIVL 230
Query: 154 YPAG 157
G
Sbjct: 231 LVTG 234
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.142 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,278,029
Number of Sequences: 37866
Number of extensions: 433534
Number of successful extensions: 2026
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2010
Number of HSP's gapped (non-prelim): 30
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.