Guide to the Human Genome
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Name: LHFPL1 Sequence: fasta or formatted (220aa) NCBI GI: 30039704
Description:

lipoma HMGIC fusion partner-like 1

Referenced in:

Adipose Tissue

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         21           4
 C cysteine            6.4         14           2
 D aspartate           0.5          1           1
 E glutamate           3.6          8           2
 F phenylalanine       4.1          9           1
 G glycine            10.0         22           3
 H histidine           0.9          2           1
 I isoleucine          3.6          8           1
 K lysine              1.4          3           1
 L leucine            11.8         26           4
 M methionine          5.9         13           2
 N asparagine          3.6          8           1
 P proline             4.1          9           1
 Q glutamine           2.7          6           1
 R arginine            4.5         10           2
 S serine              9.1         20           2
 T threonine           5.5         12           1
 V valine              6.4         14           2
 W tryptophan          2.7          6           1
 Y tyrosine            3.6          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipoma HMGIC fusion partner-like 1 
LHFP                  0.593   lipoma HMGIC fusion partner 
LHFPL2                0.147   lipoma HMGIC fusion partner-like 2 
LHFPL4                0.113   lipoma HMGIC fusion partner-like 4 
LHFPL3                0.099   lipoma HMGIC fusion partner-like 3 
LHFPL5                0.085   lipoma HMGIC fusion partner-like 5 
TMEM211               0.037   transmembrane protein 211 
SLC6A7                0.011   solute carrier family 6, member 7 
ENPP1                 0.009   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
P2RY11                0.009   purinergic receptor P2Y11 
PPAN-P2RY11           0.009   PPAN-P2RY11 protein 
CA12                  0.007   carbonic anhydrase XII isoform 1 precursor 
ACAT1                 0.007   acetyl-Coenzyme A acetyltransferase 1 precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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