Guide to the Human Genome
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Name: TMBIM1 Sequence: fasta or formatted (311aa) NCBI GI: 50593008
Description:

transmembrane BAX inhibitor motif containing 1

Referenced in:

Glutamate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         19           2
 C cysteine            1.9          6           2
 D aspartate           3.2         10           2
 E glutamate           1.9          6           2
 F phenylalanine       6.1         19           1
 G glycine             8.4         26           2
 H histidine           1.9          6           1
 I isoleucine          8.7         27           2
 K lysine              1.6          5           1
 L leucine             7.7         24           2
 M methionine          3.2         10           1
 N asparagine          2.3          7           1
 P proline             9.3         29           4
 Q glutamine           3.5         11           1
 R arginine            3.9         12           3
 S serine              5.1         16           2
 T threonine           7.4         23           1
 V valine              9.0         28           2
 W tryptophan          1.0          3           1
 Y tyrosine            7.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane BAX inhibitor motif containing 1 [Homo... 
FAIM2                 0.432   Fas apoptotic inhibitory molecule 2 
GRINA                 0.365   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.365   glutamate receptor, ionotropic, N-methyl D-aspartate...
TMBIM4                0.137   transmembrane BAX inhibitor motif containing 4 [Hom...
PRR13                 0.048   proline rich 13 isoform 1 
ANXA7                 0.042   annexin VII isoform 2 
ANXA7                 0.042   annexin VII isoform 1 
CCNK                  0.037   cyclin K isoform 1 
ANXA11                0.034   annexin A11 
ANXA11                0.034   annexin A11 
ANXA11                0.034   annexin A11 
COL8A1                0.031   alpha 1 type VIII collagen precursor 
COL8A1                0.031   alpha 1 type VIII collagen precursor 
PRB3                  0.031   proline-rich protein BstNI subfamily 3 precursor [H...
SS18                  0.031   synovial sarcoma translocation, chromosome 18 isofor...
SETD1A                0.031   SET domain containing 1A 
HNRNPUL1              0.029   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.029   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
CPSF6                 0.029   cleavage and polyadenylation specific factor 6, 68 ...
SF3B4                 0.029   splicing factor 3b, subunit 4 
SS18                  0.027   synovial sarcoma translocation, chromosome 18 isofor...
VASP                  0.027   vasodilator-stimulated phosphoprotein 
PLSCR1                0.027   phospholipid scramblase 1 
DIAPH1                0.027   diaphanous 1 isoform 2 
DIAPH1                0.027   diaphanous 1 isoform 1 
WASF2                 0.026   WAS protein family, member 2 
LGALS3                0.026   galectin 3 
PTPN23                0.026   protein tyrosine phosphatase, non-receptor type 23 [...
PRB2                  0.026   proline-rich protein BstNI subfamily 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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