Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 31742478
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31742478 ring finger protein 3 [Homo sapiens]
(242 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31742478 ring finger protein 3 [Homo sapiens] 505 e-143
gi|33300663 polycomb group ring finger 5 [Homo sapiens] 211 4e-55
gi|109240538 polycomb group ring finger 1 [Homo sapiens] 177 7e-45
gi|27883842 BMI1 polycomb ring finger oncogene [Homo sapiens] 155 4e-38
gi|6005964 ring finger protein 110 [Homo sapiens] 154 5e-38
gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens] 152 3e-37
gi|37655165 polycomb group ring finger 6 isoform b [Homo sapiens] 89 4e-18
gi|6005747 ring finger protein 2 [Homo sapiens] 57 1e-08
gi|51479192 ring finger protein 1 [Homo sapiens] 51 1e-06
gi|239048909 checkpoint with forkhead and ring finger domains is... 50 2e-06
gi|239048905 checkpoint with forkhead and ring finger domains is... 50 2e-06
gi|239048862 checkpoint with forkhead and ring finger domains is... 50 2e-06
gi|239048792 checkpoint with forkhead and ring finger domains is... 50 2e-06
gi|239048907 checkpoint with forkhead and ring finger domains is... 50 2e-06
gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens] 49 4e-06
gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens] 49 4e-06
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 48 7e-06
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 48 7e-06
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 46 3e-05
gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi... 46 3e-05
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 45 6e-05
gi|30425428 deltex homolog 3 [Homo sapiens] 45 7e-05
gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo s... 44 1e-04
gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo... 44 1e-04
gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo sap... 44 2e-04
gi|239755486 PREDICTED: tripartite motif-containing protein 64C-... 44 2e-04
gi|239755484 PREDICTED: tripartite motif-containing protein 64C-... 44 2e-04
gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo sap... 44 2e-04
gi|239750044 PREDICTED: tripartite motif-containing protein 64C-... 44 2e-04
gi|239750042 PREDICTED: tripartite motif-containing protein 64C-... 44 2e-04
>gi|31742478 ring finger protein 3 [Homo sapiens]
Length = 242
Score = 505 bits (1301), Expect = e-143
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MLTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIH 60
MLTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIH
Sbjct: 1 MLTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIH 60
Query: 61 QSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLD 120
QSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLD
Sbjct: 61 QSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLD 120
Query: 121 SHRNGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLECNSSKLRGLKRKWIRCSAQA 180
SHRNGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLECNSSKLRGLKRKWIRCSAQA
Sbjct: 121 SHRNGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLECNSSKLRGLKRKWIRCSAQA 180
Query: 181 TVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFVVVTRWRFKKAPLLLHYRPKMD 240
TVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFVVVTRWRFKKAPLLLHYRPKMD
Sbjct: 181 TVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFVVVTRWRFKKAPLLLHYRPKMD 240
Query: 241 LL 242
LL
Sbjct: 241 LL 242
>gi|33300663 polycomb group ring finger 5 [Homo sapiens]
Length = 256
Score = 211 bits (538), Expect = 4e-55
Identities = 105/267 (39%), Positives = 163/267 (61%), Gaps = 47/267 (17%)
Query: 4 RKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSH 63
RK + D N +ITC +C GYLI TTVTECLHTFC++C+V++ E++N CP C +H+++
Sbjct: 5 RKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETN 64
Query: 64 PLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLDSHR 123
PL+ + D T+++I++KLVPGL+E E+ ++ EF+ K + ++ +
Sbjct: 65 PLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKK----------------NKPQENGQ 108
Query: 124 NGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLEC-------NSSKLRGLKRKWIRC 176
+ +KAD E +E E+D DYHRSD Q++ICL+C + ++GL +K+IRC
Sbjct: 109 DDTSKADKPKVDEEGDEN-EDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRC 167
Query: 177 SAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFVVVTRWR----------- 225
S + TV +KKF++ KL L S ELD+LCN EI+GKDHT++F+ +TRWR
Sbjct: 168 STRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFRCLNC 227
Query: 226 ------------FKKAPLLLHYRPKMD 240
++ P++L YRP++D
Sbjct: 228 SASQVCSQDGPLYQSYPMVLQYRPRID 254
>gi|109240538 polycomb group ring finger 1 [Homo sapiens]
Length = 259
Score = 177 bits (449), Expect = 7e-45
Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 21/238 (8%)
Query: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHP 64
++K+ D+N HI C LC+GY +DATT+TECLHTFC+SC+VKYL+ + CP C I IH++ P
Sbjct: 35 RVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQP 94
Query: 65 LQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLDSHRN 124
L + DR MQDIVYKLVPGLQ++E ++ REFY G++ GE + S+
Sbjct: 95 LLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQPTGEEPAL-----SNLG 149
Query: 125 GETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLECNSS----KLRGLKRKWIRCSAQA 180
+ D S Y+R DEQ+++CLE SS L+ K++RCS +A
Sbjct: 150 LPFSSFDHSKAH-----------YYRYDEQLNLCLERLSSGKDKNKSVLQNKYVRCSVRA 198
Query: 181 TVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFVVVTRWRFKKAPLLLHYRPK 238
V HL++ + +L L+ + +L + E+L T+K + ++RW K +PLLL Y K
Sbjct: 199 EVRHLRRVLCHRLMLNP-QHVQLLFDNEVLPDHMTMKQIWLSRWFGKPSPLLLQYSVK 255
>gi|27883842 BMI1 polycomb ring finger oncogene [Homo sapiens]
Length = 326
Score = 155 bits (391), Expect = 4e-38
Identities = 87/249 (34%), Positives = 139/249 (55%), Gaps = 41/249 (16%)
Query: 3 TRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQS 62
T +IK+ ++N H+ C LC GY IDATT+ ECLH+FC++C+V+YLE + CP C + +H++
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63
Query: 63 HPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLDSH 122
PL I D+T+QDIVYKLVPGL + EM+++R+FY +H
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFY----------------------AAH 101
Query: 123 RNGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLEC--------------NSSKLRG 168
+ + A + SN++ E +ED DE +S+ +E SK
Sbjct: 102 PSAD--AANGSNEDRG-EVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKEKSKEEV 158
Query: 169 LKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFVV-VTRWRFK 227
++++RC A TV+HL+KF+ K+++ + ++D++ EE L +TL + + WR +
Sbjct: 159 NDKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWR-R 217
Query: 228 KAPLLLHYR 236
PL L YR
Sbjct: 218 NGPLPLKYR 226
>gi|6005964 ring finger protein 110 [Homo sapiens]
Length = 344
Score = 154 bits (390), Expect = 5e-38
Identities = 87/239 (36%), Positives = 139/239 (58%), Gaps = 19/239 (7%)
Query: 3 TRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQS 62
T +IK+ ++N H+ C LC GY IDATT+ ECLH+FC++C+V+YLE N CP C + +H++
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKT 63
Query: 63 HPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGM-EVP---GDIKGETCSAKQH 118
PL I D+T+QDIVYKLVPGL + EM+++R+FY + EVP + +GE +Q
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEV--LEQE 121
Query: 119 LDSHRNGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLECNSSKLRGLKRKWIRCSA 178
+ + E + E A ++ E+ D + G+ +++RC A
Sbjct: 122 KGALSDDEIVSLSIEFYEGARDRDEKKGPLENGD---------GDKEKTGV--RFLRCPA 170
Query: 179 QATVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFVV-VTRWRFKKAPLLLHYR 236
TV+HL KF+ K+++ S ++++L +E L + +TL + + WR + PL L YR
Sbjct: 171 AMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLKEYYTLMDIAYIYPWR-RNGPLPLKYR 228
>gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens]
Length = 350
Score = 152 bits (383), Expect = 3e-37
Identities = 86/239 (35%), Positives = 135/239 (56%), Gaps = 26/239 (10%)
Query: 4 RKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSH 63
R I L ++ +I C +C GYLIDATT+TECLHTFC+SC+V++ +N CP C IV+HQ+
Sbjct: 121 RLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQ 180
Query: 64 PLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLDSHR 123
PL I DR +QDIVYKLV L+E E ++ +FY + G+EVP + Q + S +
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKP------AVPQPVPSSK 234
Query: 124 NGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSICLEC-----NSSKLRGLKRKWIRCSA 178
K +S PE D +S+ LE + + L++K++R S
Sbjct: 235 GRSKKVLES----VFRIPPELD---------MSLLLEFIGANEGTGHFKPLEKKFVRVSG 281
Query: 179 QATVLHLKKFIAKKLNLSSFNELDILCNEEILGKDHTLKFV--VVTRWRFKKAPLLLHY 235
+AT+ H++KF+ +K+ L ++DI+C + +L + TL+ + + + L+LHY
Sbjct: 282 EATIGHVEKFLRRKMGLDPACQVDIICGDHLLEQYQTLREIRRAIGDAAMQDGLLVLHY 340
>gi|37655165 polycomb group ring finger 6 isoform b [Homo sapiens]
Length = 275
Score = 88.6 bits (218), Expect = 4e-18
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 4 RKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSH 63
R I L ++ +I C +C GYLIDATT+TECLHTFC+SC+V++ +N CP C IV+HQ+
Sbjct: 121 RLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQ 180
Query: 64 PLQYI 68
PL I
Sbjct: 181 PLYNI 185
Score = 47.0 bits (110), Expect = 1e-05
Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 149 HRSDEQVSICLECNSSKLRGLKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEE 208
H++ +I + + L++K++R S +AT+ H++KF+ +K+ L ++DI+C +
Sbjct: 177 HQTQPLYNISANEGTGHFKPLEKKFVRVSGEATIGHVEKFLRRKMGLDPACQVDIICGDH 236
Query: 209 ILGKDHTLKFV--VVTRWRFKKAPLLLHY 235
+L + TL+ + + + L+LHY
Sbjct: 237 LLEQYQTLREIRRAIGDAAMQDGLLVLHY 265
>gi|6005747 ring finger protein 2 [Homo sapiens]
Length = 336
Score = 57.0 bits (136), Expect = 1e-08
Identities = 61/291 (20%), Positives = 108/291 (37%), Gaps = 68/291 (23%)
Query: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEE-NNTCPTCRIVIHQSHPLQYIG 69
+++ + C +C L + T ECLH FC C++ L N CPTCR + L+
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLR--- 101
Query: 70 HDRTMQDIVYKLVPGLQEAEMRKQREF--------YHKLGMEVPGDIKGETCS-----AK 116
D ++ K+ P E E ++R L + +K + + K
Sbjct: 102 PDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKK 161
Query: 117 QHLDSHRNGETKADDS--------SNKEAA----EEKPEEDNDYHRSDEQVSICLE---- 160
Q +++ E D S SN+EA K +D+ + ++ ++
Sbjct: 162 QQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNAAMAIDPVMD 221
Query: 161 -------------CNSSKLRGLKRKWIRCSAQATVLHLKKFIAKKLNLSSF------NEL 201
K + ++I+ S ATV HL K++A +L L N++
Sbjct: 222 GASEIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQM 281
Query: 202 DILCNEE---------------ILGKDHTLKFVVVTRWRFKKAPLLLHYRP 237
++ E +L +L+ V W+ K P+ L+Y P
Sbjct: 282 NLDTASEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNK-PMELYYAP 331
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 50.8 bits (120), Expect = 1e-06
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEE-NNTCPTCRIVIHQSHPLQYIG 69
+++ + C +C L + T ECLH FC C+V L N CPTCR + L+
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLR--- 98
Query: 70 HDRTMQDIVYKLVPGLQEAEMRKQR 94
D ++ K+ P +E E + R
Sbjct: 99 PDPNFDALISKIYPSREEYEAHQDR 123
>gi|239048909 checkpoint with forkhead and ring finger domains
isoform 5 [Homo sapiens]
Length = 572
Score = 50.1 bits (118), Expect = 2e-06
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
+TC +C L D ++ C+HTFC +C ++E ++ CPTCR + +
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER 256
>gi|239048905 checkpoint with forkhead and ring finger domains
isoform 3 [Homo sapiens]
Length = 652
Score = 50.1 bits (118), Expect = 2e-06
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
+TC +C L D ++ C+HTFC +C ++E ++ CPTCR + +
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER 336
>gi|239048862 checkpoint with forkhead and ring finger domains
isoform 2 [Homo sapiens]
Length = 663
Score = 50.1 bits (118), Expect = 2e-06
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
+TC +C L D ++ C+HTFC +C ++E ++ CPTCR + +
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER 348
>gi|239048792 checkpoint with forkhead and ring finger domains
isoform 1 [Homo sapiens]
Length = 664
Score = 50.1 bits (118), Expect = 2e-06
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
+TC +C L D ++ C+HTFC +C ++E ++ CPTCR + +
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER 348
>gi|239048907 checkpoint with forkhead and ring finger domains
isoform 4 [Homo sapiens]
Length = 623
Score = 50.1 bits (118), Expect = 2e-06
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
+TC +C L D ++ C+HTFC +C ++E ++ CPTCR + +
Sbjct: 261 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER 307
>gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 48.9 bits (115), Expect = 4e-06
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 10 DINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSH 63
D++ + C +CSG L + C H FC +C+ ++ + TCP R V+ +H
Sbjct: 11 DVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAH 64
>gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 48.9 bits (115), Expect = 4e-06
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 10 DINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSH 63
D++ + C +CSG L + C H FC +C+ ++ + TCP R V+ +H
Sbjct: 11 DVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAH 64
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 48.1 bits (113), Expect = 7e-06
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
+ C LC + T T C HTFC CL + L+ N CP C+ + Q + + M
Sbjct: 465 LECALCMRLFYEPVT-TPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 523
Query: 75 QDIVYKLVPGLQEAEMRKQREFYHK 99
++++ K +P E++++R+ Y +
Sbjct: 524 EELIAKFLP----EELKERRKLYEE 544
Score = 37.4 bits (85), Expect = 0.012
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 7 KLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRI 57
++WD CR C G+L D +++ C HTFC+ CL + + C C +
Sbjct: 151 EVWD---GFKCRKCHGFLSDPVSLS-CGHTFCKLCLERGRAADRRCALCGV 197
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 48.1 bits (113), Expect = 7e-06
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
+ C LC + T T C HTFC CL + L+ N CP C+ + Q + + M
Sbjct: 424 LECALCMRLFYEPVT-TPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 482
Query: 75 QDIVYKLVPGLQEAEMRKQREFYHK 99
++++ K +P E++++R+ Y +
Sbjct: 483 EELIAKFLP----EELKERRKLYEE 503
Score = 37.4 bits (85), Expect = 0.012
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 7 KLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRI 57
++WD CR C G+L D +++ C HTFC+ CL + + C C +
Sbjct: 151 EVWD---GFKCRKCHGFLSDPVSLS-CGHTFCKLCLERGRAADRRCALCGV 197
>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
sapiens]
Length = 481
Score = 45.8 bits (107), Expect = 3e-05
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKY-------LEENNTCPTCR 56
+ C +C G L + T+ +C H FCR+CL +Y LEE+ TCP C+
Sbjct: 14 VNCPICQGTLREPVTI-DCGHNFCRACLTRYCEIPGPDLEESPTCPLCK 61
>gi|157426896 tripartite motif-containing 10 isoform 2 [Homo
sapiens]
Length = 395
Score = 45.8 bits (107), Expect = 3e-05
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKY-------LEENNTCPTCR 56
+ C +C G L + T+ +C H FCR+CL +Y LEE+ TCP C+
Sbjct: 14 VNCPICQGTLREPVTI-DCGHNFCRACLTRYCEIPGPDLEESPTCPLCK 61
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 45.1 bits (105), Expect = 6e-05
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 8 LWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKY---LEENNTCPTCRIVIHQSH 63
L + A C +C YL D T+ EC H FCRSC+ + L+E CP CR + H
Sbjct: 7 LTGLQAEAKCSICLDYLSDPVTI-ECGHNFCRSCIQQSWLDLQELFPCPVCRHQCQEGH 64
>gi|30425428 deltex homolog 3 [Homo sapiens]
Length = 347
Score = 44.7 bits (104), Expect = 7e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 TCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTC 55
TC +C G + +A T+ +C H+FC C+ + L+ CP C
Sbjct: 163 TCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
>gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo
sapiens]
Length = 731
Score = 43.9 bits (102), Expect = 1e-04
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 10 DINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVI 59
D + C +C +I+ +T+C H+FC C+ + LE+NN CP C V+
Sbjct: 129 DKSNDFVCPICFD-MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 177
>gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo
sapiens]
Length = 707
Score = 43.9 bits (102), Expect = 1e-04
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 10 DINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVI 59
D + C +C +I+ +T+C H+FC C+ + LE+NN CP C V+
Sbjct: 129 DKSNDFVCPICFD-MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV 177
>gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 13 AHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEEN---NTCPTCRIVIHQSH 63
+ +TC +C+ YL D T+ C H FC CL E+ N CP CR + Q +
Sbjct: 11 SELTCSICTDYLTDPVTIC-CGHRFCSPCLCLLWEDTLTPNCCPVCREISQQMY 63
>gi|239755486 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT---CPTCR 56
+ C +C Y ID T T+C+H+FCR CL EE CP CR
Sbjct: 13 LICCICVNYFIDPVT-TDCVHSFCRPCLCLCSEEGRAPMRCPLCR 56
>gi|239755484 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT---CPTCR 56
+ C +C Y ID T T+C+H+FCR CL EE CP CR
Sbjct: 13 LICCICVNYFIDPVT-TDCVHSFCRPCLCLCSEEGRAPMRCPLCR 56
>gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 13 AHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEEN---NTCPTCRIVIHQSH 63
+ +TC +C+ YL D T+ C H FC CL E+ N CP CR + Q +
Sbjct: 11 SELTCSICTDYLTDPVTIC-CGHRFCSPCLCLLWEDTLTPNCCPVCREISQQMY 63
>gi|239750044 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT---CPTCR 56
+ C +C Y ID T T+C+H+FCR CL EE CP CR
Sbjct: 13 LICCICVNYFIDPVT-TDCVHSFCRPCLCLCSEEGRAPMRCPLCR 56
>gi|239750042 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT---CPTCR 56
+ C +C Y ID T T+C+H+FCR CL EE CP CR
Sbjct: 13 LICCICVNYFIDPVT-TDCVHSFCRPCLCLCSEEGRAPMRCPLCR 56
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,983,653
Number of Sequences: 37866
Number of extensions: 445295
Number of successful extensions: 2696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 2420
Number of HSP's gapped (non-prelim): 385
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.