LOC646754 20236

Name: LOC646754	Sequence: fasta or formatted (450aa)		NCBI GI: 239750042
Description: PREDICTED: tripartite motif-containing protein 64C-like isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt mRNA [450aa] PREDICTED: tripartite motif-containing protein 64C-like isoform 2 alt prot [447aa] PREDICTED: tripartite motif-containing protein 64C-like isoform 1 alt prot [447aa] PREDICTED: tripartite motif-containing protein 64C-like isoform 2 alt mRNA [450aa] PREDICTED: tripartite motif-containing protein 64C-like isoform 1 alt prot [447aa] PREDICTED: tripartite motif-containing protein 64C-like isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 18 2 C cysteine 4.9 22 2 D aspartate 6.2 28 2 E glutamate 6.7 30 3 F phenylalanine 4.9 22 2 G glycine 3.6 16 1 H histidine 2.9 13 1 I isoleucine 5.1 23 2 K lysine 4.2 19 2 L leucine 8.7 39 2 M methionine 2.9 13 1 N asparagine 4.9 22 2 P proline 5.3 24 2 Q glutamine 5.1 23 2 R arginine 5.1 23 2 S serine 9.3 42 2 T threonine 5.3 24 2 V valine 6.4 29 1 W tryptophan 1.8 8 1 Y tyrosine 2.7 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 1.000 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 1.000 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.969 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.969 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.969 PREDICTED: tripartite motif-containing protein 64C-... TRIM64 0.891 tripartite motif-containing 64 LOC642446 0.890 PREDICTED: tripartite motif-containing protein 64B-... LOC653192 0.424 PREDICTED: Tripartite motif-containing protein 43-li... TRIM43 0.424 tripartite motif-containing 43 LOC283116 0.403 PREDICTED: similar to ring finger protein 18 isofor... SPRYD5 0.395 SPRY domain containing 5 LOC653111 0.377 PREDICTED: similar to ring finger protein 18 TRIM49 0.375 ring finger protein 18 LOC283116 0.368 PREDICTED: similar to ring finger protein 18 LOC283116 0.366 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.366 PREDICTED: similar to ring finger protein 18 LOC120824 0.362 PREDICTED: similar to hCG1802386 LOC120824 0.362 PREDICTED: similar to hCG1802386 LOC120824 0.361 PREDICTED: similar to hCG1802386 LOC729384 0.356 hypothetical protein LOC729384 LOC100134006 0.356 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.356 PREDICTED: similar to ring finger protein 18 LOC100131392 0.356 PREDICTED: similar to ring finger protein 18 LOC399939 0.356 PREDICTED: similar to ring finger protein 18 LOC100289112 0.352 PREDICTED: hypothetical protein XP_002343148 TRIM77 0.352 tripartite motif-containing 77 TRIM77 0.338 PREDICTED: tripartite motif-containing 77 TRIM77 0.338 PREDICTED: tripartite motif-containing 77 TRIML1 0.249 tripartite motif family-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.